Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1935 NP_001035957 18 1935 XP_006721991 18 1935 XP_006721990 18 1935 XP_006721989 18 1935 XP_005258041 18 1935 XP_006721988 18 1935 XP_006721987 18 1935 XP_006721986 18 1935 XP_005258040 18 1935 XP_006721985 18 1935 NP_001092879 17 4312 XP_005273927 17 4312 XP_005273926 17 4312 XP_005273925 17 4312 XP_005273924 17 4312 XP_006718549 17 4312 NP_060236 16 7355 NP_057308 16 7355 NP_001073312 16 7355 NP_001096127 16 7355 NP_005157 16 7355 NP_001019978 16 7355 XP_005259656 16 7355 XP_005267072 16 7355 XP_006710775 16 7355 XP_005263536 16 7355 NP_277052 15 9605 NP_001278062 15 9605 NP_037398 15 9605 NP_001120856 15 9605 NP_055951 15 9605 NP_006369 15 9605 NP_001264262 15 9605 XP_003959998 15 9605 XP_005269774 15 9605 XP_006717868 15 9605 XP_005251711 15 9605 XP_006716993 15 9605 XP_006716992 15 9605 XP_006716991 15 9605 XP_006716990 15 9605 XP_006716989 15 9605 XP_006716988 15 9605 XP_006716987 15 9605 XP_006716986 15 9605 XP_006716985 15 9605 XP_005250117 15 9605 XP_005265032 15 9605 XP_005265031 15 9605 XP_005265030 15 9605 NP_003583 15 9605>NP_000258 Length = 2818 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQRDELARV 9 SQ DELARV Sbjct: 1234 SQWDELARV 1242>NP_001035957 Length = 2839 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQRDELARV 9 SQ DELARV Sbjct: 1234 SQWDELARV 1242>XP_006721991 Length = 1632 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQRDELARV 9 SQ DELARV Sbjct: 1244 SQWDELARV 1252>XP_006721990 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQRDELARV 9 SQ DELARV Sbjct: 1244 SQWDELARV 1252>XP_006721989 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQRDELARV 9 SQ DELARV Sbjct: 1244 SQWDELARV 1252>XP_005258041 Length = 2836 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQRDELARV 9 SQ DELARV Sbjct: 1234 SQWDELARV 1242>XP_006721988 Length = 2846 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQRDELARV 9 SQ DELARV Sbjct: 1244 SQWDELARV 1252>XP_006721987 Length = 2849 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQRDELARV 9 SQ DELARV Sbjct: 1244 SQWDELARV 1252>XP_006721986 Length = 2854 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQRDELARV 9 SQ DELARV Sbjct: 1231 SQWDELARV 1239>XP_005258040 Length = 2857 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQRDELARV 9 SQ DELARV Sbjct: 1234 SQWDELARV 1242>XP_006721985 Length = 2867 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQRDELARV 9 SQ DELARV Sbjct: 1244 SQWDELARV 1252>NP_001092879 Length = 1523 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRDELAR 8 +QRDEL R Sbjct: 1476 NQRDELVR 1483>XP_005273927 Length = 777 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRDELAR 8 +QRDEL R Sbjct: 730 NQRDELVR 737>XP_005273926 Length = 835 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRDELAR 8 +QRDEL R Sbjct: 788 NQRDELVR 795>XP_005273925 Length = 935 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRDELAR 8 +QRDEL R Sbjct: 888 NQRDELVR 895>XP_005273924 Length = 993 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRDELAR 8 +QRDEL R Sbjct: 946 NQRDELVR 953>XP_006718549 Length = 1535 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRDELAR 8 +QRDEL R Sbjct: 1488 NQRDELVR 1495>NP_060236 Length = 1166 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RDELAR 8 RDELAR Sbjct: 197 RDELAR 202>NP_057308 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQRDELARV 9 ++RDELA V Sbjct: 369 AERDELAGV 377>NP_001073312 Length = 1759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RDELAR 8 RDELAR Sbjct: 197 RDELAR 202>NP_001096127 Length = 936 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRDELAR 8 SQR +LAR Sbjct: 452 SQRSQLAR 459>NP_005157 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QRDELA 7 QRDELA Sbjct: 566 QRDELA 571>NP_001019978 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QRDELA 7 QRDELA Sbjct: 567 QRDELA 572>XP_005259656 Length = 1373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QRDELA 7 QRDELA Sbjct: 1286 QRDELA 1291>XP_005267072 Length = 588 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQRDELARV 9 ++RDELA V Sbjct: 362 AERDELAGV 370>XP_006710775 Length = 1759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RDELAR 8 RDELAR Sbjct: 197 RDELAR 202>XP_005263536 Length = 1783 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RDELAR 8 RDELAR Sbjct: 221 RDELAR 226>NP_277052 Length = 1731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDELARV 9 R+ELAR+ Sbjct: 1298 REELARI 1304>NP_001278062 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRDELA 7 +QRDE+A Sbjct: 211 NQRDEIA 217>NP_037398 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRDELA 7 +QRDE+A Sbjct: 199 NQRDEIA 205>NP_001120856 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRDELA 7 +QRDE+A Sbjct: 199 NQRDEIA 205>NP_055951 Length = 2570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDELARV 9 +DELAR+ Sbjct: 1629 QDELARI 1635>NP_006369 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQRDELARV 9 SQ+ LARV Sbjct: 577 SQKSNLARV 585>NP_001264262 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDELARV 9 RDE+AR+ Sbjct: 565 RDEIARL 571>XP_003959998 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDELARV 9 RDE+AR+ Sbjct: 287 RDEIARL 293>XP_005269774 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRDELA 7 +QRDE+A Sbjct: 211 NQRDEIA 217>XP_006717868 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQRDELA 7 +QRDE+A Sbjct: 211 NQRDEIA 217>XP_005251711 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQRDELARV 9 SQ+ LARV Sbjct: 577 SQKSNLARV 585>XP_006716993 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQRDELARV 9 SQ+ LARV Sbjct: 602 SQKSNLARV 610>XP_006716992 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQRDELARV 9 SQ+ LARV Sbjct: 602 SQKSNLARV 610>XP_006716991 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQRDELARV 9 SQ+ LARV Sbjct: 602 SQKSNLARV 610>XP_006716990 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQRDELARV 9 SQ+ LARV Sbjct: 602 SQKSNLARV 610>XP_006716989 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQRDELARV 9 SQ+ LARV Sbjct: 602 SQKSNLARV 610>XP_006716988 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQRDELARV 9 SQ+ LARV Sbjct: 602 SQKSNLARV 610>XP_006716987 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQRDELARV 9 SQ+ LARV Sbjct: 602 SQKSNLARV 610>XP_006716986 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQRDELARV 9 SQ+ LARV Sbjct: 602 SQKSNLARV 610>XP_006716985 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQRDELARV 9 SQ+ LARV Sbjct: 602 SQKSNLARV 610>XP_005250117 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRDELAR 8 S +DELAR Sbjct: 282 STQDELAR 289>XP_005265032 Length = 2545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDELARV 9 +DELAR+ Sbjct: 1629 QDELARI 1635>XP_005265031 Length = 2569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDELARV 9 +DELAR+ Sbjct: 1629 QDELARI 1635>XP_005265030 Length = 2595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDELARV 9 +DELAR+ Sbjct: 1629 QDELARI 1635>NP_003583 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQRDELAR 8 S +DELAR Sbjct: 282 STQDELAR 289Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.125 0.303 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 453,516 Number of extensions: 549 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |