Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 20 509 NP_444254 20 509 NP_444253 20 509 NP_444255 20 509 XP_005247551 20 509 XP_005247550 20 509 XP_006713712 20 509 XP_005247549 20 509 NP_443137 17 3301 NP_937816 17 3301 NP_937817 17 3301 NP_001129243 17 3301 NP_002942 17 3301 XP_006723915 17 3301 XP_006723914 17 3301 XP_005260548 17 3301 XP_006723913 17 3301 XP_006723912 17 3301 XP_006712292 17 3301 XP_005246323 17 3301 XP_005246322 17 3301 XP_006712291 17 3301 XP_005246320 17 3301 NP_001264044 16 5631 NP_001243544 16 7355 NP_064615 16 7355 NP_001123564 16 7355 NP_001123563 16 7355 NP_001123562 16 7355 NP_112584 16 7355 NP_001185619 16 7355 NP_001035754 16 7355 XP_006721648 16 7355 XP_005256867 16 7355 XP_006721647 16 7355 XP_006721646 16 7355 NP_001360 15 9605 NP_001612 15 9605 NP_001159758 15 9605 NP_064596 15 9605 NP_001159761 15 9605 NP_001159755 15 9605 NP_001159760 15 9605 NP_001159759 15 9605 NP_690621 15 9605 NP_690620 15 9605 NP_690619 15 9605 NP_055516 15 9605 NP_055386 15 9605 NP_001180418 15 9605 NP_002812 15 9605 NP_001257327 15 9605 NP_001193856 15 9605 XP_006715067 15 9605 XP_005248319 15 9605 XP_005270802 15 9605>NP_444256 Length = 1794 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QQVDFRSV 9 QQVDFRSV Sbjct: 880 QQVDFRSV 887>NP_444254 Length = 1845 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QQVDFRSV 9 QQVDFRSV Sbjct: 880 QQVDFRSV 887>NP_444253 Length = 1914 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QQVDFRSV 9 QQVDFRSV Sbjct: 949 QQVDFRSV 956>NP_444255 Length = 1863 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QQVDFRSV 9 QQVDFRSV Sbjct: 949 QQVDFRSV 956>XP_005247551 Length = 1855 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QQVDFRSV 9 QQVDFRSV Sbjct: 890 QQVDFRSV 897>XP_005247550 Length = 1856 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QQVDFRSV 9 QQVDFRSV Sbjct: 959 QQVDFRSV 966>XP_006713712 Length = 1923 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QQVDFRSV 9 QQVDFRSV Sbjct: 959 QQVDFRSV 966>XP_005247549 Length = 1924 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QQVDFRSV 9 QQVDFRSV Sbjct: 959 QQVDFRSV 966>NP_443137 Length = 1092 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQQVDFRS 8 SQQ DFR+ Sbjct: 9 SQQTDFRA 16>NP_937816 Length = 602 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQQVDFRSV 9 S ++DFRSV Sbjct: 2 SNELDFRSV 10>NP_937817 Length = 626 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQQVDFRSV 9 S ++DFRSV Sbjct: 2 SNELDFRSV 10>NP_001129243 Length = 615 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQQVDFRSV 9 SQQ D RS+ Sbjct: 140 SQQADLRSI 148>NP_002942 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQQVDFRSV 9 SQQ D RS+ Sbjct: 172 SQQADLRSI 180>XP_006723915 Length = 615 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQQVDFRSV 9 SQQ D RS+ Sbjct: 188 SQQADLRSI 196>XP_006723914 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQQVDFRSV 9 SQQ D RS+ Sbjct: 188 SQQADLRSI 196>XP_005260548 Length = 647 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQQVDFRSV 9 SQQ D RS+ Sbjct: 172 SQQADLRSI 180>XP_006723913 Length = 647 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQQVDFRSV 9 SQQ D RS+ Sbjct: 188 SQQADLRSI 196>XP_006723912 Length = 663 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQQVDFRSV 9 SQQ D RS+ Sbjct: 188 SQQADLRSI 196>XP_006712292 Length = 641 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQQVDFRS 8 SQQ DFR+ Sbjct: 9 SQQTDFRA 16>XP_005246323 Length = 1069 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQQVDFRS 8 SQQ DFR+ Sbjct: 9 SQQTDFRA 16>XP_005246322 Length = 1084 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQQVDFRS 8 SQQ DFR+ Sbjct: 9 SQQTDFRA 16>XP_006712291 Length = 1086 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQQVDFRS 8 SQQ DFR+ Sbjct: 9 SQQTDFRA 16>XP_005246320 Length = 1087 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQQVDFRS 8 SQQ DFR+ Sbjct: 9 SQQTDFRA 16>NP_001264044 Length = 4516 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SQQVDFRSV 9 S+Q+D++S+ Sbjct: 1920 SEQMDYKSI 1928>NP_001243544 Length = 123 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQQVDFRS 8 SQQ+ FRS Sbjct: 86 SQQLGFRS 93>NP_064615 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQQVDFR 7 SQ++DFR Sbjct: 189 SQELDFR 195>NP_001123564 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQQVDFRSV 9 S Q+DFR++ Sbjct: 47 SLQLDFRNI 55>NP_001123563 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQQVDFRSV 9 S Q+DFR++ Sbjct: 47 SLQLDFRNI 55>NP_001123562 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQQVDFRSV 9 S Q+DFR++ Sbjct: 47 SLQLDFRNI 55>NP_112584 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQQVDFRSV 9 S Q+DFR++ Sbjct: 47 SLQLDFRNI 55>NP_001185619 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQQVDFR 7 SQ++DFR Sbjct: 189 SQELDFR 195>NP_001035754 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQQVDFR 7 SQ++DFR Sbjct: 189 SQELDFR 195>XP_006721648 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQQVDFRSV 9 S Q+DFR++ Sbjct: 47 SLQLDFRNI 55>XP_005256867 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQQVDFRSV 9 S Q+DFR++ Sbjct: 47 SLQLDFRNI 55>XP_006721647 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQQVDFRSV 9 S Q+DFR++ Sbjct: 47 SLQLDFRNI 55>XP_006721646 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQQVDFRSV 9 S Q+DFR++ Sbjct: 47 SLQLDFRNI 55>NP_001360 Length = 4624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQQVDFRSV 9 S Q+DFR + Sbjct: 2007 SDQMDFRGL 2015>NP_001612 Length = 848 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQQVDFRSV 9 S +VDFR + Sbjct: 567 SGEVDFRDI 575>NP_001159758 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SQQVDFRS 8 +QQ+DF++ Sbjct: 306 NQQIDFQA 313>NP_064596 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SQQVDFRS 8 +QQ+DF++ Sbjct: 322 NQQIDFQA 329>NP_001159761 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SQQVDFRS 8 +QQ+DF++ Sbjct: 306 NQQIDFQA 313>NP_001159755 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SQQVDFRS 8 +QQ+DF++ Sbjct: 330 NQQIDFQA 337>NP_001159760 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SQQVDFRS 8 +QQ+DF++ Sbjct: 306 NQQIDFQA 313>NP_001159759 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SQQVDFRS 8 +QQ+DF++ Sbjct: 306 NQQIDFQA 313>NP_690621 Length = 1014 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QQVDFR 7 QQ+DFR Sbjct: 783 QQLDFR 788>NP_690620 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QQVDFR 7 QQ+DFR Sbjct: 709 QQLDFR 714>NP_690619 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QQVDFR 7 QQ+DFR Sbjct: 799 QQLDFR 804>NP_055516 Length = 1056 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SQQVDFRS 8 SQQ DF S Sbjct: 218 SQQTDFPS 225>NP_055386 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VDFRSV 9 VDFRS+ Sbjct: 114 VDFRSI 119>NP_001180418 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SQQVDFRS 8 SQQ DF S Sbjct: 218 SQQTDFPS 225>NP_002812 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QQVDFR 7 QQ+DFR Sbjct: 839 QQLDFR 844>NP_001257327 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QQVDFR 7 QQ+DFR Sbjct: 847 QQLDFR 852>NP_001193856 Length = 4707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQQVDFRSV 9 S Q+DFR + Sbjct: 2090 SDQMDFRGL 2098>XP_006715067 Length = 4707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQQVDFRSV 9 S Q+DFR + Sbjct: 2090 SDQMDFRGL 2098>XP_005248319 Length = 4609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQQVDFRSV 9 S Q+DFR + Sbjct: 1992 SDQMDFRGL 2000>XP_005270802 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VDFRSV 9 VDFRS+ Sbjct: 86 VDFRSI 91Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.126 0.317 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 421,751 Number of extensions: 438 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |