Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 509 NP_671714 20 509 XP_006715890 20 509 XP_005250160 20 509 XP_005250159 20 509 NP_001243779 17 2528 NP_596869 17 2528 XP_006712787 17 2528 XP_006712786 17 2528 NP_001254479 17 2528 NP_758442 17 3301 XP_005252703 17 3301 XP_005252702 17 3301 XP_006711677 17 3301 NP_078845 17 3301 NP_003944 17 3301 NP_036575 17 3301 NP_001240784 17 3301 NP_002238 16 5631 NP_001258448 16 5631 NP_001154825 16 5631 NP_001258447 16 5631 NP_001154824 16 5631 NP_001014797 16 5631 XP_005269842 16 5631 XP_005269838 16 5631 XP_005269835 16 5631 XP_005269837 16 5631 XP_006717893 16 5631 XP_005269844 16 5631 XP_005269833 16 5631 XP_006717891 16 5631 XP_006717890 16 5631 XP_005269854 16 5631 XP_005269853 16 5631 XP_005269852 16 5631 XP_006717889 16 5631 XP_005269849 16 5631 XP_005269846 16 5631 XP_006717888 16 5631 XP_006717887 16 5631 XP_006717886 16 5631 XP_006717885 16 5631 XP_006717884 16 5631 XP_005269836 16 5631 NP_001276089 16 7355 NP_005922 16 7355 NP_000238 16 7355 NP_078796 16 7355 XP_006726158 16 7355 XP_006726065 16 7355 NP_001276081 15 9605 NP_001170990 15 9605 NP_001276082 15 9605 NP_060579 15 9605>NP_005742 Length = 3907 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 SQ IETMQF Sbjct: 675 SQKIETMQF 683>NP_671714 Length = 3899 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 SQ IETMQF Sbjct: 675 SQKIETMQF 683>XP_006715890 Length = 3860 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 SQ IETMQF Sbjct: 675 SQKIETMQF 683>XP_005250160 Length = 3939 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 SQ IETMQF Sbjct: 675 SQKIETMQF 683>XP_005250159 Length = 3952 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 SQ IETMQF Sbjct: 675 SQKIETMQF 683>NP_001243779 Length = 34350 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S+NI T+QF Sbjct: 8471 SENIATLQF 8479Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QNIETMQF 9 +N+ T+QF Sbjct: 6590 ENVATLQF 6597>NP_596869 Length = 33423 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S+NI T+QF Sbjct: 7544 SENIATLQF 7552Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QNIETMQF 9 +N+ T+QF Sbjct: 5663 ENVATLQF 5670>XP_006712787 Length = 33978 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S+NI T+QF Sbjct: 8472 SENIATLQF 8480Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QNIETMQF 9 +N+ T+QF Sbjct: 6591 ENVATLQF 6598>XP_006712786 Length = 35484 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S+NI T+QF Sbjct: 8472 SENIATLQF 8480Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QNIETMQF 9 +N+ T+QF Sbjct: 6591 ENVATLQF 6598>NP_001254479 Length = 35991 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S+NI T+QF Sbjct: 8788 SENIATLQF 8796Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QNIETMQF 9 +N+ T+QF Sbjct: 6907 ENVATLQF 6914>NP_758442 Length = 458 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QNIETMQ 8 QNIET+Q Sbjct: 32 QNIETLQ 38>XP_005252703 Length = 451 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QNIETMQ 8 QNIET+Q Sbjct: 32 QNIETLQ 38>XP_005252702 Length = 506 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QNIETMQ 8 QNIET+Q Sbjct: 32 QNIETLQ 38>XP_006711677 Length = 339 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SQNIETMQF 9 S NIE MQF Sbjct: 189 SINIENMQF 197>NP_078845 Length = 209 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SQNIETMQF 9 S NIE MQF Sbjct: 119 SINIENMQF 127>NP_003944 Length = 269 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SQNIETMQF 9 S NIE MQF Sbjct: 119 SINIENMQF 127>NP_036575 Length = 509 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QNIETMQ 8 QNIET+Q Sbjct: 32 QNIETLQ 38>NP_001240784 Length = 484 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QNIETMQ 8 QNIET+Q Sbjct: 10 QNIETLQ 16>NP_002238 Length = 1178 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 889 SLNIKSMQF 897>NP_001258448 Length = 1208 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 892 SLNIKSMQF 900>NP_001154825 Length = 1219 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 930 SLNIKSMQF 938>NP_001258447 Length = 1128 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 839 SLNIKSMQF 847>NP_001154824 Length = 1236 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 947 SLNIKSMQF 955>NP_001014797 Length = 1182 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 893 SLNIKSMQF 901>XP_005269842 Length = 1234 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 893 SLNIKSMQF 901>XP_005269838 Length = 1236 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 947 SLNIKSMQF 955>XP_005269835 Length = 1239 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 951 SLNIKSMQF 959>XP_005269837 Length = 1243 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 954 SLNIKSMQF 962>XP_006717893 Length = 1233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 918 SLNIKSMQF 926>XP_005269844 Length = 1230 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 889 SLNIKSMQF 897>XP_005269833 Length = 1257 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 889 SLNIKSMQF 897>XP_006717891 Length = 1143 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 827 SLNIKSMQF 835>XP_006717890 Length = 1145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 829 SLNIKSMQF 837>XP_005269854 Length = 1177 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 889 SLNIKSMQF 897>XP_005269853 Length = 1178 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 889 SLNIKSMQF 897>XP_005269852 Length = 1181 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 893 SLNIKSMQF 901>XP_006717889 Length = 1205 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 889 SLNIKSMQF 897>XP_005269849 Length = 1207 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 918 SLNIKSMQF 926>XP_005269846 Length = 1209 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 893 SLNIKSMQF 901>XP_006717888 Length = 1210 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 922 SLNIKSMQF 930>XP_006717887 Length = 1211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 922 SLNIKSMQF 930>XP_006717886 Length = 1234 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 918 SLNIKSMQF 926>XP_006717885 Length = 1237 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 922 SLNIKSMQF 930>XP_006717884 Length = 1238 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 922 SLNIKSMQF 930>XP_005269836 Length = 1238 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 S NI++MQF Sbjct: 922 SLNIKSMQF 930>NP_001276089 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQNIETMQ 8 SQN+ET + Sbjct: 110 SQNLETQE 117>NP_005922 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQNIETMQ 8 SQN+ET + Sbjct: 142 SQNLETQE 149>NP_000238 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 SQN+ET ++ Sbjct: 142 SQNLETKEW 150>NP_078796 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQNIETMQ 8 +QN+ET Q Sbjct: 252 NQNVETKQ 259>XP_006726158 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQNIETMQ 8 SQN+ET + Sbjct: 110 SQNLETQE 117>XP_006726065 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQNIETMQ 8 SQN+ET + Sbjct: 110 SQNLETQE 117>NP_001276081 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 SQN+ET ++ Sbjct: 45 SQNLETEEW 53>NP_001170990 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 SQN+ET ++ Sbjct: 142 SQNLETEEW 150>NP_001276082 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQNIETMQF 9 SQN+ET ++ Sbjct: 45 SQNLETEEW 53>NP_060579 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQNIETMQ 8 SQN ET++ Sbjct: 431 SQNTETLE 438Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.119 0.298 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 350,221 Number of extensions: 435 Number of successful extensions: 60 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |