Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 21 175 XP_006713721 21 175 NP_085135 17 4312 NP_003096 17 4312 XP_005258413 17 4312 NP_055845 16 5631 NP_149094 16 5631 NP_056163 16 5631 NP_001170977 16 5631 NP_001628 16 5631 XP_005248148 16 5631 XP_005248147 16 5631 XP_005248146 16 5631 XP_005248145 16 5631 XP_005248144 16 5631 XP_005248143 16 5631 XP_005248142 16 5631 XP_005248141 16 5631 XP_005248140 16 5631 XP_005248139 16 5631 XP_005263969 16 5631 XP_005263968 16 5631 XP_005263967 16 5631 XP_005263966 16 5631 NP_002539 16 5631 NP_694967 16 7355 NP_060830 16 7355 NP_001277251 16 7355 NP_005500 16 7355 NP_001277250 16 7355 NP_065879 16 7355 NP_001162154 16 7355 XP_005274615 16 7355 XP_005266893 16 7355 XP_005271969 16 7355 XP_005271967 16 7355 XP_005271966 16 7355 NP_001265045 15 9605 NP_001137435 15 9605 NP_076493 15 9605 NP_000416 15 9605 NP_060452 15 9605 NP_001032252 15 9605 NP_009124 15 9605 NP_057666 15 9605 NP_001128508 15 9605 NP_001191407 15 9605 XP_005256731 15 9605 XP_005256730 15 9605 XP_005248810 15 9605 XP_006715597 15 9605 XP_005248809 15 9605 XP_006714136 15 9605 XP_005273230 15 9605 XP_005273226 15 9605 XP_006711471 15 9605 NP_660344 15 9605 NP_001695 15 9605 NP_057162 15 9605>NP_006209 Length = 1068 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQMHNKTVS 9 S+MHNKTVS Sbjct: 673 SEMHNKTVS 681>XP_006713721 Length = 1068 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQMHNKTVS 9 S+MHNKTVS Sbjct: 673 SEMHNKTVS 681>NP_085135 Length = 2248 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MHNKTVS 9 +HNKT+S Sbjct: 828 LHNKTLS 834>NP_003096 Length = 2214 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQMHNKTV 8 + +HNKTV Sbjct: 1890 TSLHNKTV 1897>XP_005258413 Length = 2249 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MHNKTVS 9 +HNKT+S Sbjct: 829 LHNKTLS 835>NP_055845 Length = 3013 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQMHNK 6 +QMHNK Sbjct: 652 AQMHNK 657>NP_149094 Length = 686 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQMHNKTVS 9 S MHNK+ + Sbjct: 598 SSMHNKSAT 606>NP_056163 Length = 1883 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MHNKTVS 9 +HN+TVS Sbjct: 945 VHNRTVS 951>NP_001170977 Length = 688 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQMHNKTV 8 +Q+HN TV Sbjct: 55 AQVHNSTV 62>NP_001628 Length = 575 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQMHNKTV 8 +Q+HN TV Sbjct: 55 AQVHNSTV 62>XP_005248148 Length = 3028 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQMHNK 6 +QMHNK Sbjct: 667 AQMHNK 672>XP_005248147 Length = 3028 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQMHNK 6 +QMHNK Sbjct: 667 AQMHNK 672>XP_005248146 Length = 3073 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQMHNK 6 +QMHNK Sbjct: 759 AQMHNK 764>XP_005248145 Length = 3079 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQMHNK 6 +QMHNK Sbjct: 718 AQMHNK 723>XP_005248144 Length = 3099 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQMHNK 6 +QMHNK Sbjct: 744 AQMHNK 749>XP_005248143 Length = 3105 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQMHNK 6 +QMHNK Sbjct: 744 AQMHNK 749>XP_005248142 Length = 3114 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQMHNK 6 +QMHNK Sbjct: 759 AQMHNK 764>XP_005248141 Length = 3119 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQMHNK 6 +QMHNK Sbjct: 759 AQMHNK 764>XP_005248140 Length = 3119 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQMHNK 6 +QMHNK Sbjct: 759 AQMHNK 764>XP_005248139 Length = 3120 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQMHNK 6 +QMHNK Sbjct: 759 AQMHNK 764>XP_005263969 Length = 1844 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MHNKTVS 9 +HN+TVS Sbjct: 906 VHNRTVS 912>XP_005263968 Length = 1861 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MHNKTVS 9 +HN+TVS Sbjct: 923 VHNRTVS 929>XP_005263967 Length = 1899 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MHNKTVS 9 +HN+TVS Sbjct: 962 VHNRTVS 968>XP_005263966 Length = 1900 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MHNKTVS 9 +HN+TVS Sbjct: 962 VHNRTVS 968>NP_002539 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QMHNKTVS 9 Q HNK +S Sbjct: 86 QSHNKAIS 93>NP_694967 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QMHNKTV 8 Q HNKT+ Sbjct: 222 QRHNKTL 228>NP_060830 Length = 528 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QMHNKTV 8 Q HNKT+ Sbjct: 216 QRHNKTL 222>NP_001277251 Length = 2854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QMHNKTVS 9 Q HNKT + Sbjct: 2662 QCHNKTAN 2669>NP_005500 Length = 3027 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QMHNKTVS 9 Q HNKT + Sbjct: 2835 QCHNKTAN 2842>NP_001277250 Length = 3048 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QMHNKTVS 9 Q HNKT + Sbjct: 2856 QCHNKTAN 2863>NP_065879 Length = 868 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 HNKTVS 9 HNKT+S Sbjct: 364 HNKTLS 369>NP_001162154 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QMHNKTV 8 Q HNKT+ Sbjct: 84 QRHNKTL 90>XP_005274615 Length = 440 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QMHNKTV 8 Q HNKT+ Sbjct: 216 QRHNKTL 222>XP_005266893 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QMHNKTV 8 Q HNKT+ Sbjct: 222 QRHNKTL 228>XP_005271969 Length = 3020 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QMHNKTVS 9 Q HNKT + Sbjct: 2828 QCHNKTAN 2835>XP_005271967 Length = 3065 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QMHNKTVS 9 Q HNKT + Sbjct: 2873 QCHNKTAN 2880>XP_005271966 Length = 3086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QMHNKTVS 9 Q HNKT + Sbjct: 2894 QCHNKTAN 2901>NP_001265045 Length = 1257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QMHNKTV 8 Q HNKT+ Sbjct: 291 QNHNKTL 297>NP_001137435 Length = 1248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QMHNKTV 8 Q HNKT+ Sbjct: 286 QNHNKTL 292>NP_076493 Length = 1253 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QMHNKTV 8 Q HNKT+ Sbjct: 291 QNHNKTL 297>NP_000416 Length = 1257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QMHNKTV 8 Q HNKT+ Sbjct: 291 QNHNKTL 297>NP_060452 Length = 490 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SQMHNKT 7 +++HNKT Sbjct: 130 AEIHNKT 136>NP_001032252 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SQMHNKT 7 +++HNKT Sbjct: 130 AEIHNKT 136>NP_009124 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 HNKTV 8 HNKTV Sbjct: 266 HNKTV 270>NP_057666 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 HNKTVS 9 HN+TVS Sbjct: 438 HNETVS 443>NP_001128508 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SQMHNKTVS 9 S NKTVS Sbjct: 112 SSQENKTVS 120>NP_001191407 Length = 164 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SQMHNKTVS 9 S NKTVS Sbjct: 112 SSQENKTVS 120>XP_005256731 Length = 119 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SQMHNKTVS 9 S NKTVS Sbjct: 26 SSQENKTVS 34>XP_005256730 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SQMHNKTVS 9 S NKTVS Sbjct: 112 SSQENKTVS 120>XP_005248810 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SQMHNKTV 8 +Q HNK++ Sbjct: 933 TQTHNKSI 940>XP_006715597 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SQMHNKTV 8 +Q HNK++ Sbjct: 933 TQTHNKSI 940>XP_005248809 Length = 1522 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SQMHNKTV 8 +Q HNK++ Sbjct: 933 TQTHNKSI 940>XP_006714136 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 HNKTV 8 HNKTV Sbjct: 289 HNKTV 293>XP_005273230 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SQMHNKT 7 +++HNKT Sbjct: 130 AEIHNKT 136>XP_005273226 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SQMHNKT 7 +++HNKT Sbjct: 130 AEIHNKT 136>XP_006711471 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SQMHNKT 7 +++HNKT Sbjct: 130 AEIHNKT 136>NP_660344 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SQMHNKTVS 9 S NKTVS Sbjct: 112 SSQENKTVS 120>NP_001695 Length = 1522 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SQMHNKTV 8 +Q HNK++ Sbjct: 933 TQTHNKSI 940>NP_057162 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SQMHNKTVS 9 S NKTVS Sbjct: 112 SSQENKTVS 120Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.101 0.257 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 491,348 Number of extensions: 588 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |