Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 19 665 NP_004561 19 665 NP_001275703 19 665 XP_005253450 19 665 XP_006719151 19 665 NP_060959 17 2528 XP_006711515 17 2528 XP_006711514 17 2528 XP_006711513 17 2528 NP_001124427 17 4312 NP_056133 17 4312 XP_006722772 17 4312 XP_006722771 17 4312 XP_005272522 17 4312 XP_006722770 17 4312 XP_006722769 17 4312 XP_006722768 17 4312 XP_005272521 17 4312 NP_001186704 16 5631 NP_001295 16 5631 NP_001274324 16 5631 XP_006712547 16 5631 NP_002215 16 7355 NP_477352 16 7355 NP_056169 16 7355 NP_001243610 16 7355 NP_001243609 16 7355 NP_001243607 16 7355 XP_005261692 16 7355 XP_005261691 16 7355 XP_006720397 16 7355 XP_005268294 16 7355 XP_006715154 16 7355 NP_001243608 16 7355 NP_055487 16 7355 NP_001175 15 9605 NP_079421 15 9605 NP_004216 15 9605 NP_775901 15 9605 XP_005266736 15 9605 XP_006722498 15 9605 XP_006722497 15 9605 XP_005270233 15 9605 XP_005270232 15 9605 XP_005270231 15 9605 XP_005270230 15 9605 XP_005270229 15 9605 XP_005270228 15 9605 NP_001001915 15 9605>NP_001275701 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQLLLNLME 9 SQLLLNL+E Sbjct: 1151 SQLLLNLLE 1159>NP_004561 Length = 1445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQLLLNLME 9 SQLLLNL+E Sbjct: 1110 SQLLLNLLE 1118>NP_001275703 Length = 1264 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQLLLNLME 9 SQLLLNL+E Sbjct: 929 SQLLLNLLE 937>XP_005253450 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQLLLNLME 9 SQLLLNL+E Sbjct: 1151 SQLLLNLLE 1159>XP_006719151 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQLLLNLME 9 SQLLLNL+E Sbjct: 1151 SQLLLNLLE 1159>NP_060959 Length = 2964 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SQLLLNLME 9 +Q+LLNL+E Sbjct: 2920 NQILLNLLE 2928>XP_006711515 Length = 2904 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SQLLLNLME 9 +Q+LLNL+E Sbjct: 2860 NQILLNLLE 2868>XP_006711514 Length = 2964 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SQLLLNLME 9 +Q+LLNL+E Sbjct: 2920 NQILLNLLE 2928>XP_006711513 Length = 2964 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SQLLLNLME 9 +Q+LLNL+E Sbjct: 2920 NQILLNLLE 2928>NP_001124427 Length = 1173 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SQLLLNL 7 SQLLLNL Sbjct: 808 SQLLLNL 814>NP_056133 Length = 1015 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SQLLLNL 7 SQLLLNL Sbjct: 650 SQLLLNL 656>XP_006722772 Length = 1015 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SQLLLNL 7 SQLLLNL Sbjct: 650 SQLLLNL 656>XP_006722771 Length = 1015 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SQLLLNL 7 SQLLLNL Sbjct: 650 SQLLLNL 656>XP_005272522 Length = 1088 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SQLLLNL 7 SQLLLNL Sbjct: 723 SQLLLNL 729>XP_006722770 Length = 1345 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SQLLLNL 7 SQLLLNL Sbjct: 980 SQLLLNL 986>XP_006722769 Length = 1361 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SQLLLNL 7 SQLLLNL Sbjct: 996 SQLLLNL 1002>XP_006722768 Length = 1361 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SQLLLNL 7 SQLLLNL Sbjct: 996 SQLLLNL 1002>XP_005272521 Length = 1426 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SQLLLNL 7 SQLLLNL Sbjct: 1061 SQLLLNL 1067>NP_001186704 Length = 1133 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QLLLNLME 9 +LLLNL+E Sbjct: 325 ELLLNLIE 332>NP_001295 Length = 1380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QLLLNLME 9 +LLLNL+E Sbjct: 572 ELLLNLIE 579>NP_001274324 Length = 1688 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QLLLNLME 9 QLLLNL++ Sbjct: 796 QLLLNLVD 803>XP_006712547 Length = 1674 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QLLLNLME 9 QLLLNL++ Sbjct: 793 QLLLNLVD 800>NP_002215 Length = 2671 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQLLLNLME 9 S+LLL LME Sbjct: 1997 SKLLLALME 2005>NP_477352 Length = 2102 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLLLNLME 9 +LL+NL+E Sbjct: 728 ELLMNLLE 735>NP_056169 Length = 1749 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQLLLNLME 9 SQL+LN+ E Sbjct: 1228 SQLVLNVCE 1236>NP_001243610 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SQLLLNLM 8 SQLLLN++ Sbjct: 51 SQLLLNVV 58>NP_001243609 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SQLLLNLM 8 SQLLLN++ Sbjct: 51 SQLLLNVV 58>NP_001243607 Length = 567 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SQLLLNLM 8 SQLLLN++ Sbjct: 407 SQLLLNVV 414>XP_005261692 Length = 1854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLLLNLME 9 +LL+NL+E Sbjct: 756 ELLMNLLE 763>XP_005261691 Length = 2099 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QLLLNLME 9 +LL+NL+E Sbjct: 756 ELLMNLLE 763>XP_006720397 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SQLLLNLM 8 SQLLLN++ Sbjct: 423 SQLLLNVV 430>XP_005268294 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SQLLLNLM 8 SQLLLN++ Sbjct: 423 SQLLLNVV 430>XP_006715154 Length = 2700 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQLLLNLME 9 S+LLL LME Sbjct: 2026 SKLLLALME 2034>NP_001243608 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SQLLLNLM 8 SQLLLN++ Sbjct: 328 SQLLLNVV 335>NP_055487 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SQLLLNLM 8 SQLLLN++ Sbjct: 423 SQLLLNVV 430>NP_001175 Length = 2644 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LLNLME 9 LLNLME Sbjct: 809 LLNLME 814>NP_079421 Length = 1665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQLLLNLME 9 S+ +LN+ME Sbjct: 818 SKTILNMME 826>NP_004216 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QLLLNLME 9 QLLL L+E Sbjct: 818 QLLLELLE 825>NP_775901 Length = 2226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLLNLME 9 LLLN ME Sbjct: 1218 LLLNFME 1224>XP_005266736 Length = 1314 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLLNLME 9 LLLN ME Sbjct: 306 LLLNFME 312>XP_006722498 Length = 2059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLLNLME 9 LLLN ME Sbjct: 1219 LLLNFME 1225>XP_006722497 Length = 2227 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLLNLME 9 LLLN ME Sbjct: 1219 LLLNFME 1225>XP_005270233 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQLLLNLME 9 S+ +LN+ME Sbjct: 80 SKTILNMME 88>XP_005270232 Length = 1535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQLLLNLME 9 S+ +LN+ME Sbjct: 819 SKTILNMME 827>XP_005270231 Length = 1627 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQLLLNLME 9 S+ +LN+ME Sbjct: 819 SKTILNMME 827>XP_005270230 Length = 1627 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQLLLNLME 9 S+ +LN+ME Sbjct: 780 SKTILNMME 788>XP_005270229 Length = 1637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQLLLNLME 9 S+ +LN+ME Sbjct: 819 SKTILNMME 827>XP_005270228 Length = 1666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQLLLNLME 9 S+ +LN+ME Sbjct: 819 SKTILNMME 827>NP_001001915 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QLLLNLME 9 QLL+NL E Sbjct: 83 QLLVNLWE 90Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.134 0.313 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 366,178 Number of extensions: 663 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |