Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 17 2528 NP_008920 17 2528 XP_006726508 17 2528 XP_006726506 17 2528 XP_005271621 17 2528 XP_006718907 17 2528 XP_006718906 17 2528 XP_005271619 17 2528 XP_005271618 17 2528 XP_006715892 17 2528 XP_006715891 17 2528 XP_005250161 17 2528 XP_005250142 17 2528 XP_005250141 17 2528 NP_001135777 16 5631 NP_057727 16 5631 NP_067645 16 7355 NP_001155856 15 9605 NP_004714 15 9605 NP_001155855 15 9605 NP_003964 15 9605 NP_001030168 15 9605 NP_001078853 15 9605 NP_851853 15 9605 NP_056117 15 9605 NP_066383 15 9605 NP_001254526 15 9605 XP_006723427 15 9605 XP_006723182 15 9605 XP_006717549 15 9605 XP_006717548 15 9605 XP_006717547 15 9605 XP_006711689 15 9605 XP_006711688 15 9605 XP_006711687 15 9605 XP_006711686 15 9605 XP_005245651 15 9605 XP_005245650 15 9605 XP_005245649 15 9605 XP_006711685 15 9605 XP_005245648 15 9605 XP_005245647 15 9605 XP_005245646 15 9605 XP_005245645 15 9605 XP_005245644 15 9605>NP_000042 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQKSALLKL 9 SQKS LLKL Sbjct: 475 SQKSDLLKL 483>NP_008920 Length = 803 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SQKSALLKL 9 S+KSAL+KL Sbjct: 609 SKKSALIKL 617>XP_006726508 Length = 396 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SQKSALLKL 9 S+KSAL+KL Sbjct: 302 SKKSALIKL 310>XP_006726506 Length = 496 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SQKSALLKL 9 S+KSAL+KL Sbjct: 302 SKKSALIKL 310>XP_005271621 Length = 2708 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQKSALLKL 9 SQKS LLKL Sbjct: 127 SQKSDLLKL 135>XP_006718907 Length = 3050 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQKSALLKL 9 SQKS LLKL Sbjct: 475 SQKSDLLKL 483>XP_006718906 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQKSALLKL 9 SQKS LLKL Sbjct: 475 SQKSDLLKL 483>XP_005271619 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQKSALLKL 9 SQKS LLKL Sbjct: 475 SQKSDLLKL 483>XP_005271618 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SQKSALLKL 9 SQKS LLKL Sbjct: 475 SQKSDLLKL 483>XP_006715892 Length = 520 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SQKSALLKL 9 S+KSAL+KL Sbjct: 326 SKKSALIKL 334>XP_006715891 Length = 703 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SQKSALLKL 9 S+KSAL+KL Sbjct: 609 SKKSALIKL 617>XP_005250161 Length = 728 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SQKSALLKL 9 S+KSAL+KL Sbjct: 609 SKKSALIKL 617>XP_005250142 Length = 728 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SQKSALLKL 9 S+KSAL+KL Sbjct: 609 SKKSALIKL 617>XP_005250141 Length = 803 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SQKSALLKL 9 S+KSAL+KL Sbjct: 609 SKKSALIKL 617>NP_001135777 Length = 317 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SQKSALLK 8 SQKSAL K Sbjct: 101 SQKSALTK 108>NP_057727 Length = 317 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SQKSALLK 8 SQKSAL K Sbjct: 101 SQKSALTK 108>NP_067645 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQKSALLK 8 SQKS L+K Sbjct: 356 SQKSGLIK 363>NP_001155856 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 94 QKAALLK 100>NP_004714 Length = 958 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 67 QKAALLK 73>NP_001155855 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 94 QKAALLK 100>NP_003964 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 131 QKAALLK 137>NP_001030168 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 131 QKAALLK 137>NP_001078853 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SQKSALLK 8 SQ+SALL+ Sbjct: 255 SQRSALLQ 262Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SQKSALLK 8 SQ+SALL+ Sbjct: 339 SQRSALLQ 346>NP_851853 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QKSALLKL 9 QK+ALL+L Sbjct: 265 QKAALLEL 272>NP_056117 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQKSALLK 8 SQ+S LLK Sbjct: 306 SQRSTLLK 313>NP_066383 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 +KSALLK Sbjct: 335 EKSALLK 341>NP_001254526 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 +KSALLK Sbjct: 335 EKSALLK 341>XP_006723427 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SQKSALLK 8 SQ+SALL+ Sbjct: 292 SQRSALLQ 299Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SQKSALLK 8 SQ+SALL+ Sbjct: 376 SQRSALLQ 383>XP_006723182 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQKSALLK 8 SQ+S LLK Sbjct: 306 SQRSTLLK 313>XP_006717549 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 +KSALLK Sbjct: 335 EKSALLK 341>XP_006717548 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 +KSALLK Sbjct: 335 EKSALLK 341>XP_006717547 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 +KSALLK Sbjct: 335 EKSALLK 341>XP_006711689 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 18 QKAALLK 24>XP_006711688 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 18 QKAALLK 24>XP_006711687 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 18 QKAALLK 24>XP_006711686 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 18 QKAALLK 24>XP_005245651 Length = 969 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 67 QKAALLK 73>XP_005245650 Length = 969 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 67 QKAALLK 73>XP_005245649 Length = 969 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 67 QKAALLK 73>XP_006711685 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 77 QKAALLK 83>XP_005245648 Length = 981 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 79 QKAALLK 85>XP_005245647 Length = 981 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 79 QKAALLK 85>XP_005245646 Length = 988 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 86 QKAALLK 92>XP_005245645 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 94 QKAALLK 100>XP_005245644 Length = 996 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKSALLK 8 QK+ALLK Sbjct: 94 QKAALLK 100Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.117 0.252 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 298,413 Number of extensions: 506 Number of successful extensions: 47 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |