Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001273456 16 5631 NP_001153780 16 5631 NP_114121 16 5631 XP_006721418 16 5631 XP_006719943 16 5631 XP_006719942 16 5631 XP_005266629 16 5631 XP_005266627 16 5631 XP_005266626 16 5631 XP_005266625 16 5631 NP_001153699 16 7355 NP_079413 16 7355 NP_006022 16 7355 NP_996999 16 7355 NP_001073948 16 7355 NP_996994 16 7355 NP_612152 16 7355 NP_001171164 16 7355 XP_005261185 16 7355 XP_005261184 16 7355 XP_005261182 16 7355 XP_005261181 16 7355 XP_006720764 16 7355 XP_005254752 16 7355 XP_006720763 16 7355 XP_006720762 16 7355 XP_005254751 16 7355 XP_006715811 16 7355 XP_005249842 16 7355 XP_006715715 16 7355 XP_006714732 16 7355 NP_001231118 15 9605 NP_001231121 15 9605 NP_055564 15 9605 NP_001231119 15 9605 NP_001231120 15 9605 NP_001231122 15 9605 NP_001243183 15 9605 NP_001243181 15 9605 NP_001965 15 9605 NP_001243182 15 9605 NP_001243184 15 9605 XP_006720406 15 9605 XP_006720405 15 9605 XP_006720404 15 9605 XP_006720403 15 9605 XP_006720402 15 9605 XP_006720401 15 9605 XP_006720400 15 9605 XP_006720399 15 9605 XP_005273939 15 9605 NP_115879 15 9605>NP_001273456 Length = 975 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQKMEISCS 9 SQK E+ C+ Sbjct: 780 SQKTEVCCT 788>NP_001153780 Length = 707 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QKMEISCS 9 +K+E++CS Sbjct: 418 RKLEVACS 425>NP_114121 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QKMEISCS 9 +K+E++CS Sbjct: 430 RKLEVACS 437>XP_006721418 Length = 972 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQKMEISCS 9 SQK E+ C+ Sbjct: 777 SQKTEVCCT 785>XP_006719943 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QKMEISCS 9 +K+E++CS Sbjct: 418 RKLEVACS 425>XP_006719942 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QKMEISCS 9 +K+E++CS Sbjct: 418 RKLEVACS 425>XP_005266629 Length = 518 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QKMEISCS 9 +K+E++CS Sbjct: 229 RKLEVACS 236>XP_005266627 Length = 534 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QKMEISCS 9 +K+E++CS Sbjct: 418 RKLEVACS 425>XP_005266626 Length = 695 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QKMEISCS 9 +K+E++CS Sbjct: 406 RKLEVACS 413>XP_005266625 Length = 707 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 QKMEISCS 9 +K+E++CS Sbjct: 418 RKLEVACS 425>NP_001153699 Length = 2330 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SQKMEISC 8 + K+E+SC Sbjct: 351 NSKLEVSC 358>NP_079413 Length = 2443 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SQKMEISC 8 + K+E+SC Sbjct: 351 NSKLEVSC 358>NP_006022 Length = 3336 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQKMEISCS 9 +QK E+ CS Sbjct: 2852 TQKRELRCS 2860>NP_996999 Length = 866 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQKMEISC 8 S K+E+SC Sbjct: 552 SGKLELSC 559>NP_001073948 Length = 1731 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MEISCS 9 ME+SCS Sbjct: 1 MELSCS 6>NP_996994 Length = 923 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQKMEISC 8 S K+E+SC Sbjct: 609 SGKLELSC 616>NP_612152 Length = 2849 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SQKMEISC 8 S KME SC Sbjct: 185 SLKMEASC 192>NP_001171164 Length = 1705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MEISCS 9 ME+SCS Sbjct: 1 MELSCS 6>XP_005261185 Length = 3229 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQKMEISCS 9 +QK E+ CS Sbjct: 2745 TQKRELRCS 2753>XP_005261184 Length = 3258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQKMEISCS 9 +QK E+ CS Sbjct: 2863 TQKRELRCS 2871>XP_005261182 Length = 3346 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQKMEISCS 9 +QK E+ CS Sbjct: 2862 TQKRELRCS 2870>XP_005261181 Length = 3347 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQKMEISCS 9 +QK E+ CS Sbjct: 2863 TQKRELRCS 2871>XP_006720764 Length = 1584 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SQKMEISC 8 + K+E+SC Sbjct: 351 NSKLEVSC 358>XP_005254752 Length = 2357 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SQKMEISC 8 + K+E+SC Sbjct: 265 NSKLEVSC 272>XP_006720763 Length = 2395 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SQKMEISC 8 + K+E+SC Sbjct: 351 NSKLEVSC 358>XP_006720762 Length = 2397 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SQKMEISC 8 + K+E+SC Sbjct: 351 NSKLEVSC 358>XP_005254751 Length = 2407 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SQKMEISC 8 + K+E+SC Sbjct: 351 NSKLEVSC 358>XP_006715811 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQKMEISC 8 S K+E+SC Sbjct: 174 SGKLELSC 181>XP_005249842 Length = 923 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQKMEISC 8 S K+E+SC Sbjct: 609 SGKLELSC 616>XP_006715715 Length = 2023 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SQKMEISC 8 S KME SC Sbjct: 185 SLKMEASC 192>XP_006714732 Length = 1633 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MEISCS 9 ME+SCS Sbjct: 1 MELSCS 6>NP_001231118 Length = 1644 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 + ME+SC Sbjct: 421 ENMEVSC 427>NP_001231121 Length = 1504 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 + ME+SC Sbjct: 324 ENMEVSC 330>NP_055564 Length = 1472 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 + ME+SC Sbjct: 368 ENMEVSC 374>NP_001231119 Length = 1533 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 + ME+SC Sbjct: 353 ENMEVSC 359>NP_001231120 Length = 1463 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 + ME+SC Sbjct: 283 ENMEVSC 289>NP_001231122 Length = 1347 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 + ME+SC Sbjct: 228 ENMEVSC 234>NP_001243183 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KMEISCS 9 KM+I CS Sbjct: 318 KMKIGCS 324>NP_001243181 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KMEISCS 9 KM+I CS Sbjct: 407 KMKIGCS 413>NP_001965 Length = 886 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KMEISCS 9 KM+I CS Sbjct: 459 KMKIGCS 465>NP_001243182 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KMEISCS 9 KM+I CS Sbjct: 459 KMKIGCS 465>NP_001243184 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KMEISCS 9 KM+I CS Sbjct: 282 KMKIGCS 288>XP_006720406 Length = 1591 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 + ME+SC Sbjct: 368 ENMEVSC 374>XP_006720405 Length = 1347 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 + ME+SC Sbjct: 368 ENMEVSC 374>XP_006720404 Length = 1477 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 + ME+SC Sbjct: 368 ENMEVSC 374>XP_006720403 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 + ME+SC Sbjct: 368 ENMEVSC 374>XP_006720402 Length = 1487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 + ME+SC Sbjct: 368 ENMEVSC 374>XP_006720401 Length = 1504 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 + ME+SC Sbjct: 368 ENMEVSC 374>XP_006720400 Length = 1526 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 + ME+SC Sbjct: 368 ENMEVSC 374>XP_006720399 Length = 1548 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 + ME+SC Sbjct: 368 ENMEVSC 374>XP_005273939 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MEISCS 9 M+ISCS Sbjct: 1 MQISCS 6>NP_115879 Length = 100 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 QKMEISC 8 QK+ +SC Sbjct: 15 QKLRVSC 21Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.108 0.285 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 620,149 Number of extensions: 891 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |