Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 20 390 NP_001263689 20 390 NP_001119584 20 390 NP_001119586 20 390 NP_001263625 20 390 NP_001119590 20 390 NP_001263690 20 390 NP_001119585 20 390 NP_001263624 20 390 NP_001119588 20 390 NP_001119587 20 390 NP_001119589 20 390 NP_001263627 20 390 NP_001263628 20 390 NP_001263626 20 390 NP_002968 19 869 XP_005246814 19 869 NP_000876 18 1935 NP_001157570 17 4312 NP_004376 17 4312 NP_443173 17 4312 NP_001108451 16 5631 NP_001108454 16 5631 NP_003713 16 5631 NP_001108450 16 5631 NP_001108452 16 5631 NP_001108453 16 5631 NP_006260 16 5631 NP_037483 16 5631 XP_005247903 16 5631 XP_005247901 16 5631 XP_005247900 16 5631 NP_001229625 16 5631 NP_000766 16 7355 NP_631901 16 7355 NP_683684 16 7355 NP_689594 16 7355 XP_006712319 16 7355 NP_001186073 16 7355 NP_001004704 16 7355 NP_060311 15 9605 NP_056349 15 9605 NP_001193583 15 9605 NP_006303 15 9605 NP_001070729 15 9605 NP_001006623 15 9605 NP_057315 15 9605 NP_036516 15 9605 NP_758953 15 9605 XP_005260259 15 9605 XP_005258045 15 9605 XP_005267412 15 9605 XP_005267411 15 9605 XP_005270784 15 9605 XP_005270783 15 9605 XP_005270782 15 9605 NP_001004696 15 9605 NP_001004697 15 9605 NP_001005234 15 9605 NP_001004694 15 9605>NP_000537 Length = 393 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 166 SQHMTEVV 173>NP_001263689 Length = 354 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 127 SQHMTEVV 134>NP_001119584 Length = 393 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 166 SQHMTEVV 173>NP_001119586 Length = 341 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 166 SQHMTEVV 173>NP_001263625 Length = 302 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 127 SQHMTEVV 134>NP_001119590 Length = 354 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 127 SQHMTEVV 134>NP_001263690 Length = 354 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 127 SQHMTEVV 134>NP_001119585 Length = 346 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 166 SQHMTEVV 173>NP_001263624 Length = 307 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 127 SQHMTEVV 134>NP_001119588 Length = 209 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 34 SQHMTEVV 41>NP_001119587 Length = 261 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 34 SQHMTEVV 41>NP_001119589 Length = 214 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 34 SQHMTEVV 41>NP_001263627 Length = 182 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 7 SQHMTEVV 14>NP_001263628 Length = 187 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 7 SQHMTEVV 14>NP_001263626 Length = 234 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEVV Sbjct: 7 SQHMTEVV 14>NP_002968 Length = 1977 Score = 18.9 bits (37), Expect = 869 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEV+ Sbjct: 1529 SQHMTEVL 1536>XP_005246814 Length = 1988 Score = 18.9 bits (37), Expect = 869 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 SQHMTEV+ Sbjct: 1540 SQHMTEVL 1547>NP_000876 Length = 1032 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SQHMTEVV 8 SQH TEVV Sbjct: 262 SQHTTEVV 269>NP_001157570 Length = 1642 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQHMTEVVL 9 SQH TE+ L Sbjct: 647 SQHRTEIEL 655>NP_004376 Length = 3396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQHMTEVVL 9 SQH TE+ L Sbjct: 647 SQHRTEIEL 655>NP_443173 Length = 640 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQHMTEVVL 9 S+H+TE +L Sbjct: 429 SEHLTESIL 437>NP_001108451 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 ++H+TEVV Sbjct: 234 AEHVTEVV 241>NP_001108454 Length = 393 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 ++H+TEVV Sbjct: 140 AEHVTEVV 147>NP_003713 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 ++H+TEVV Sbjct: 234 AEHVTEVV 241>NP_001108450 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 ++H+TEVV Sbjct: 234 AEHVTEVV 241>NP_001108452 Length = 586 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 ++H+TEVV Sbjct: 140 AEHVTEVV 147>NP_001108453 Length = 461 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 ++H+TEVV Sbjct: 140 AEHVTEVV 147>NP_006260 Length = 2156 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QHMTEVV 8 QH+TEV+ Sbjct: 185 QHLTEVM 191>NP_037483 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SQHMTEVVL 9 +QH TE+++ Sbjct: 151 NQHQTEMII 159>XP_005247903 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 ++H+TEVV Sbjct: 234 AEHVTEVV 241>XP_005247901 Length = 663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 ++H+TEVV Sbjct: 217 AEHVTEVV 224>XP_005247900 Length = 676 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 ++H+TEVV Sbjct: 234 AEHVTEVV 241>NP_001229625 Length = 143 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QHMTEVVL 9 QH+TE +L Sbjct: 79 QHLTEKIL 86>NP_000766 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SQHMTEVV 8 +QH+TE + Sbjct: 163 AQHLTEAI 170>NP_631901 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HMTEVVL 9 H+T+VVL Sbjct: 377 HLTQVVL 383>NP_683684 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HMTEVVL 9 H+T+VVL Sbjct: 388 HLTQVVL 394>NP_689594 Length = 3549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQHMTEV 7 +QH+TEV Sbjct: 2577 NQHITEV 2583>XP_006712319 Length = 3308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQHMTEV 7 +QH+TEV Sbjct: 2336 NQHITEV 2342>NP_001186073 Length = 3327 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQHMTEV 7 +QH+TEV Sbjct: 2355 NQHITEV 2361>NP_001004704 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQHMTEVVL 9 S H+T VVL Sbjct: 239 SSHLTVVVL 247>NP_060311 Length = 166 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 QHMTE 6 QHMTE Sbjct: 95 QHMTE 99>NP_056349 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQHMTE 6 SQH+TE Sbjct: 474 SQHITE 479>NP_001193583 Length = 2504 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 +QH++EV+ Sbjct: 2123 AQHISEVI 2130>NP_006303 Length = 2514 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 +QH++EV+ Sbjct: 2133 AQHISEVI 2140>NP_001070729 Length = 2458 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SQHMTEVV 8 +QH++EV+ Sbjct: 2123 AQHISEVI 2130>NP_001006623 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HMTEVVL 9 H++EVVL Sbjct: 266 HLSEVVL 272>NP_057315 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQHMTEVVL 9 S+HMT+ V+ Sbjct: 294 SRHMTQEVV 302>NP_036516 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQHMTEVVL 9 S HM EVV+ Sbjct: 7 SVHMEEVVV 15>NP_758953 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 QHMTEV 7 QH+TE+ Sbjct: 254 QHLTEI 259>XP_005260259 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQHMTEVVL 9 S HM EVV+ Sbjct: 7 SVHMEEVVV 15>XP_005258045 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQHMTEVVL 9 S+HMT+ V+ Sbjct: 294 SRHMTQEVV 302>XP_005267412 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 QHMTEV 7 QH+TE+ Sbjct: 210 QHLTEI 215>XP_005267411 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 QHMTEV 7 QH+TE+ Sbjct: 242 QHLTEI 247>XP_005270784 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQHMTE 6 SQH+TE Sbjct: 474 SQHITE 479>XP_005270783 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQHMTE 6 SQH+TE Sbjct: 474 SQHITE 479>XP_005270782 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SQHMTE 6 SQH+TE Sbjct: 474 SQHITE 479>NP_001004696 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQHMTEVVL 9 S H+T V+L Sbjct: 274 SSHLTVVIL 282>NP_001004697 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQHMTEVVL 9 S H+T V+L Sbjct: 246 SSHLTVVIL 254>NP_001005234 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQHMTEVVL 9 S H+T V+L Sbjct: 242 SSHLTVVIL 250>NP_001004694 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SQHMTEVVL 9 S H+T V+L Sbjct: 246 SSHLTVVIL 254Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.120 0.307 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 522,156 Number of extensions: 664 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |