Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 21 229 NP_004561 21 229 NP_001275703 21 229 XP_005253450 21 229 XP_006719151 21 229 NP_036542 18 1482 NP_001107572 18 1482 NP_001107571 18 1482 NP_963869 18 1482 NP_001230262 18 1482 NP_001230261 18 1482 XP_005255309 18 1482 NP_919260 18 1482 NP_001104292 17 2528 NP_808592 17 4312 NP_004306 17 4312 NP_001120977 17 4312 XP_005273561 17 4312 NP_006562 16 5631 NP_689948 16 5631 NP_005531 16 7355 NP_055534 16 7355 NP_056264 16 7355 NP_001092086 16 7355 NP_001193867 16 7355 NP_001193870 16 7355 XP_006716256 16 7355 XP_006716255 16 7355 XP_006716254 16 7355 XP_006716253 16 7355 XP_005250134 16 7355 XP_005250133 16 7355 XP_005250132 16 7355 XP_005250131 16 7355 XP_005245134 16 7355 XP_005270894 16 7355 XP_005270892 16 7355 NP_620077 16 7355 NP_001269557 15 9605 NP_001269560 15 9605 NP_000038 15 9605 NP_004130 15 9605 NP_065128 15 9605 NP_001135943 15 9605 NP_620686 15 9605 NP_071445 15 9605 NP_055025 15 9605 NP_001003927 15 9605 NP_001010980 15 9605 XP_005274578 15 9605 XP_005274576 15 9605 XP_005274575 15 9605 XP_006721306 15 9605 XP_006721305 15 9605 XP_005256141 15 9605 XP_005271476 15 9605 XP_006718836 15 9605 XP_005263206 15 9605 XP_005263205 15 9605 XP_005245929 15 9605 NP_001001824 15 9605 NP_001935 15 9605>NP_001275701 Length = 1486 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SPVTVQIDF 9 SPVT+QIDF Sbjct: 660 SPVTLQIDF 668>NP_004561 Length = 1445 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SPVTVQIDF 9 SPVT+QIDF Sbjct: 619 SPVTLQIDF 627>NP_001275703 Length = 1264 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SPVTVQIDF 9 SPVT+QIDF Sbjct: 438 SPVTLQIDF 446>XP_005253450 Length = 1486 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SPVTVQIDF 9 SPVT+QIDF Sbjct: 660 SPVTLQIDF 668>XP_006719151 Length = 1486 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SPVTVQIDF 9 SPVT+QIDF Sbjct: 660 SPVTLQIDF 668>NP_036542 Length = 853 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPVTVQIDF 9 SP+TV+ DF Sbjct: 828 SPITVESDF 836>NP_001107572 Length = 809 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPVTVQIDF 9 SP+TV+ DF Sbjct: 784 SPITVESDF 792>NP_001107571 Length = 840 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPVTVQIDF 9 SP+TV+ DF Sbjct: 815 SPITVESDF 823>NP_963869 Length = 910 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPVTVQIDF 9 SP+TV+ DF Sbjct: 885 SPITVESDF 893>NP_001230262 Length = 879 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPVTVQIDF 9 SP+TV+ DF Sbjct: 854 SPITVESDF 862>NP_001230261 Length = 923 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPVTVQIDF 9 SP+TV+ DF Sbjct: 898 SPITVESDF 906>XP_005255309 Length = 859 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPVTVQIDF 9 SP+TV+ DF Sbjct: 834 SPITVESDF 842>NP_919260 Length = 292 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPVTVQIDF 9 SPVTVQ+ + Sbjct: 150 SPVTVQVSY 158>NP_001104292 Length = 395 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PVTVQIDF 9 PVT+ IDF Sbjct: 132 PVTLHIDF 139>NP_808592 Length = 395 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PVTVQIDF 9 P+TV +DF Sbjct: 184 PLTVNLDF 191>NP_004306 Length = 411 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PVTVQIDF 9 P+TV +DF Sbjct: 200 PLTVNLDF 207>NP_001120977 Length = 389 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PVTVQIDF 9 P+TV +DF Sbjct: 178 PLTVNLDF 185>XP_005273561 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PVTVQIDF 9 P+TV +DF Sbjct: 162 PLTVNLDF 169>NP_006562 Length = 190 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PVTVQIDF 9 P T+Q+DF Sbjct: 159 PQTLQLDF 166>NP_689948 Length = 473 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SPVTVQIDF 9 +P T+QI+F Sbjct: 19 APRTIQIEF 27>NP_005531 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SPVTVQID 8 S VTVQ+D Sbjct: 95 SDVTVQLD 102>NP_055534 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SPVTVQID 8 SP+TV+++ Sbjct: 527 SPITVEVN 534>NP_056264 Length = 219 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SPVTVQIDF 9 SP T+Q+ + Sbjct: 181 SPTTIQVTY 189>NP_001092086 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SPVTVQIDF 9 SP T+Q+ + Sbjct: 215 SPTTIQVTY 223>NP_001193867 Length = 919 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SPVTVQID 8 SP+TV+++ Sbjct: 527 SPITVEVN 534>NP_001193870 Length = 497 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SPVTVQID 8 SP+TV+++ Sbjct: 103 SPITVEVN 110>XP_006716256 Length = 919 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SPVTVQID 8 SP+TV+++ Sbjct: 527 SPITVEVN 534>XP_006716255 Length = 919 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SPVTVQID 8 SP+TV+++ Sbjct: 527 SPITVEVN 534>XP_006716254 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SPVTVQID 8 SP+TV+++ Sbjct: 527 SPITVEVN 534>XP_006716253 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SPVTVQID 8 SP+TV+++ Sbjct: 527 SPITVEVN 534>XP_005250134 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SPVTVQID 8 SP+TV+++ Sbjct: 527 SPITVEVN 534>XP_005250133 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SPVTVQID 8 SP+TV+++ Sbjct: 527 SPITVEVN 534>XP_005250132 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SPVTVQID 8 SP+TV+++ Sbjct: 527 SPITVEVN 534>XP_005250131 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SPVTVQID 8 SP+TV+++ Sbjct: 527 SPITVEVN 534>XP_005245134 Length = 235 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SPVTVQIDF 9 SP T+Q+ + Sbjct: 197 SPTTIQVTY 205>XP_005270894 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SPVTVQID 8 S VTVQ+D Sbjct: 95 SDVTVQLD 102>XP_005270892 Length = 801 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SPVTVQID 8 S VTVQ+D Sbjct: 95 SDVTVQLD 102>NP_620077 Length = 201 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SPVTVQIDF 9 SP T+Q+ + Sbjct: 163 SPTTIQVTY 171>NP_001269557 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPVTVQID 8 SPV +Q+D Sbjct: 578 SPVPLQLD 585>NP_001269560 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPVTVQID 8 SPV +Q+D Sbjct: 508 SPVPLQLD 515>NP_000038 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPVTVQID 8 SPV +Q+D Sbjct: 553 SPVPLQLD 560>NP_004130 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PVTVQID 8 PVT +ID Sbjct: 217 PVTTEID 223>NP_065128 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SPVTVQ 6 SP+TVQ Sbjct: 128 SPITVQ 133>NP_001135943 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SPVTVQ 6 SP+TVQ Sbjct: 128 SPITVQ 133>NP_620686 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SPVTVQID 8 SP +QID Sbjct: 391 SPTLIQID 398>NP_071445 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PVTVQIDF 9 PV +Q+D+ Sbjct: 792 PVALQLDY 799>NP_055025 Length = 236 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 SPVTVQIDF 9 +P+T ++D+ Sbjct: 62 NPITPEVDY 70>NP_001003927 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 SPVTVQIDF 9 +P+T ++D+ Sbjct: 85 NPITPEVDY 93>NP_001010980 Length = 102 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPVTVQID 8 SPV VQ++ Sbjct: 93 SPVDVQVE 100>XP_005274578 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPVTVQID 8 SPV +Q+D Sbjct: 499 SPVPLQLD 506>XP_005274576 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPVTVQID 8 SPV +Q+D Sbjct: 553 SPVPLQLD 560>XP_005274575 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPVTVQID 8 SPV +Q+D Sbjct: 562 SPVPLQLD 569>XP_006721306 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PVTVQIDF 9 PV +Q+D+ Sbjct: 765 PVALQLDY 772>XP_006721305 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PVTVQIDF 9 PV +Q+D+ Sbjct: 765 PVALQLDY 772>XP_005256141 Length = 1013 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PVTVQIDF 9 PV +Q+D+ Sbjct: 765 PVALQLDY 772>XP_005271476 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SPVTVQID 8 SP +QID Sbjct: 60 SPTLIQID 67>XP_006718836 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SPVTVQID 8 SP +QID Sbjct: 83 SPTLIQID 90>XP_005263206 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SPVTVQ 6 SP+TVQ Sbjct: 128 SPITVQ 133>XP_005263205 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SPVTVQ 6 SP+TVQ Sbjct: 128 SPITVQ 133>XP_005245929 Length = 102 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPVTVQID 8 SPV VQ++ Sbjct: 93 SPVDVQVE 100>NP_001001824 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SPVTVQIDF 9 +PVT+Q F Sbjct: 160 TPVTMQFPF 168>NP_001935 Length = 999 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SPVTVQI 7 +PVT+Q+ Sbjct: 368 TPVTIQV 374Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.139 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 544,126 Number of extensions: 1084 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |