Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001006608 18 1935 NP_955372 18 1935 NP_055649 18 1935 XP_005275724 18 1935 XP_005275722 18 1935 XP_005275721 18 1935 XP_006725345 18 1935 XP_006725344 18 1935 XP_005275719 18 1935 XP_006725343 18 1935 XP_006725342 18 1935 XP_005275717 18 1935 XP_005275716 18 1935 XP_005257941 18 1935 XP_005257940 18 1935 XP_006722274 18 1935 XP_006722273 18 1935 XP_005257939 18 1935 XP_006722272 18 1935 XP_005257937 18 1935 XP_005257936 18 1935 XP_005257935 18 1935 XP_006722271 18 1935 NP_004110 17 2528 NP_003740 17 4312 XP_006711469 17 4312 XP_005245352 17 4312 NP_001276953 16 7355 NP_714912 16 7355 NP_001276952 16 7355 NP_005526 16 7355 NP_001171655 16 7355 NP_000346 16 7355 NP_000557 16 7355 XP_006722804 16 7355 XP_005245015 16 7355 XP_005245014 16 7355 NP_078966 15 9605 NP_006107 15 9605 NP_001483 15 9605 NP_060501 15 9605 NP_848611 15 9605 NP_056453 15 9605 NP_001017922 15 9605 NP_061008 15 9605 NP_955400 15 9605 XP_006726571 15 9605 XP_006726570 15 9605 XP_003960511 15 9605 XP_006717414 15 9605 XP_005264894 15 9605 XP_006710376 15 9605 XP_005270472 15 9605 XP_006710282 15 9605>NP_001006608 Length = 1700 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>NP_955372 Length = 1634 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>NP_055649 Length = 1700 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_005275724 Length = 894 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_005275722 Length = 969 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_005275721 Length = 1018 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_006725345 Length = 1600 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_006725344 Length = 1606 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 509 SPSVTVQLL 517>XP_005275719 Length = 1625 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_006725343 Length = 1635 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_006725342 Length = 1651 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_005275717 Length = 1665 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_005275716 Length = 1676 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_005257941 Length = 969 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_005257940 Length = 1018 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_006722274 Length = 1576 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_006722273 Length = 1600 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_005257939 Length = 1606 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 509 SPSVTVQLL 517>XP_006722272 Length = 1635 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_005257937 Length = 1651 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_005257936 Length = 1665 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_005257935 Length = 1676 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>XP_006722271 Length = 1700 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SPSITLQVL 9 SPS+T+Q+L Sbjct: 603 SPSVTVQLL 611>NP_004110 Length = 993 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SPSITLQVL 9 S SITLQVL Sbjct: 86 SASITLQVL 94>NP_003740 Length = 1338 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 PSITLQVL 9 PS+TLQ++ Sbjct: 236 PSVTLQLM 243>XP_006711469 Length = 357 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SPSITLQV 8 SPS+TL+V Sbjct: 15 SPSLTLKV 22>XP_005245352 Length = 357 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SPSITLQV 8 SPS+TL+V Sbjct: 15 SPSLTLKV 22>NP_001276953 Length = 702 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPSITLQV 8 SP +TLQ+ Sbjct: 166 SPEVTLQL 173>NP_714912 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPSITLQV 8 SP +TLQ+ Sbjct: 126 SPEVTLQL 133>NP_001276952 Length = 660 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPSITLQV 8 SP +TLQ+ Sbjct: 126 SPEVTLQL 133>NP_005526 Length = 662 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPSITLQV 8 SP +TLQ+ Sbjct: 126 SPEVTLQL 133>NP_001171655 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SITLQVL 9 S+TLQVL Sbjct: 304 SVTLQVL 310>NP_000346 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SITLQVL 9 S+TLQVL Sbjct: 331 SVTLQVL 337>NP_000557 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPSITLQVL 9 SP + LQVL Sbjct: 273 SPELELQVL 281>XP_006722804 Length = 674 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPSITLQV 8 SP +TLQ+ Sbjct: 126 SPEVTLQL 133>XP_005245015 Length = 282 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPSITLQVL 9 SP + LQVL Sbjct: 181 SPELELQVL 189>XP_005245014 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPSITLQVL 9 SP + LQVL Sbjct: 274 SPELELQVL 282>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SPSITL 6 SPSITL Sbjct: 2308 SPSITL 2313>NP_006107 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SPSITLQ 7 SP++TLQ Sbjct: 438 SPTLTLQ 444>NP_001483 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SPSITLQ 7 SP +TLQ Sbjct: 82 SPGVTLQ 88>NP_060501 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SPSITLQ 7 +PS+TLQ Sbjct: 1001 TPSLTLQ 1007>NP_848611 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PSITLQVL 9 P+I LQ+L Sbjct: 423 PAIVLQIL 430>NP_056453 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPSITLQV 8 SP ITL++ Sbjct: 449 SPDITLKI 456>NP_001017922 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SITLQVL 9 S+TLQ+L Sbjct: 108 SVTLQIL 114>NP_061008 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SITLQVL 9 S+TLQ+L Sbjct: 108 SVTLQIL 114>NP_955400 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPSITLQV 8 SP ITL++ Sbjct: 441 SPDITLKI 448>XP_006726571 Length = 3681 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SPSITLQVL 9 SPS LQVL Sbjct: 1539 SPSPRLQVL 1547>XP_006726570 Length = 3722 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SPSITLQVL 9 SPS LQVL Sbjct: 1539 SPSPRLQVL 1547>XP_003960511 Length = 3722 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SPSITLQVL 9 SPS LQVL Sbjct: 1539 SPSPRLQVL 1547>XP_006717414 Length = 5100 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SPSITLQVL 9 SPS LQVL Sbjct: 2917 SPSPRLQVL 2925>XP_005264894 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SPSITLQ 7 +PS+TLQ Sbjct: 920 TPSLTLQ 926>XP_006710376 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SITLQVL 9 S+TLQ+L Sbjct: 108 SVTLQIL 114>XP_005270472 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SITLQVL 9 S+TLQ+L Sbjct: 169 SVTLQIL 175>XP_006710282 Length = 2621 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SPSITLQVL 9 SPS LQVL Sbjct: 438 SPSPRLQVL 446Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.128 0.320 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 642,304 Number of extensions: 1038 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |