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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004295                                                              19     665
NP_996844                                                              19     869
XP_005254439                                                           19     869
XP_006720568                                                           19     869
XP_005254438                                                           19     869
NP_002335                                                              19     869
NP_001128668                                                           17    4312
XP_006717666                                                           17    4312
XP_005269535                                                           17    4312
XP_006717665                                                           17    4312
XP_005269533                                                           17    4312
XP_005269534                                                           17    4312
NP_001034200                                                           16    5631
NP_056537                                                              16    7355
NP_055898                                                              16    7355
NP_057591                                                              16    7355
XP_006723058                                                           16    7355
XP_005257515                                                           16    7355
XP_005257513                                                           16    7355
XP_005252742                                                           16    7355
NP_001073903                                                           16    7355
NP_001258825                                                           15    9605
NP_001258824                                                           15    9605
NP_079426                                                              15    9605
XP_006711619                                                           15    9605
XP_006711618                                                           15    9605
NP_055714                                                              15    9605

>NP_004295
          Length = 1620

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    SPLQVVVKT 9
            SPLQV VKT
Sbjct: 1143 SPLQVAVKT 1151



>NP_996844
          Length = 803

 Score = 18.9 bits (37), Expect =   869
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   SPLQVVVKT 9
           SPLQV +KT
Sbjct: 476 SPLQVAIKT 484



>XP_005254439
          Length = 475

 Score = 18.9 bits (37), Expect =   869
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   SPLQVVVKT 9
           SPLQV +KT
Sbjct: 148 SPLQVAIKT 156



>XP_006720568
          Length = 771

 Score = 18.9 bits (37), Expect =   869
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   SPLQVVVKT 9
           SPLQV +KT
Sbjct: 444 SPLQVAIKT 452



>XP_005254438
          Length = 819

 Score = 18.9 bits (37), Expect =   869
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   SPLQVVVKT 9
           SPLQV +KT
Sbjct: 492 SPLQVAIKT 500



>NP_002335
          Length = 864

 Score = 18.9 bits (37), Expect =   869
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   SPLQVVVKT 9
           SPLQV +KT
Sbjct: 537 SPLQVAIKT 545



>NP_001128668
          Length = 1435

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    PLQVVVKT 9
            PLQV +KT
Sbjct: 1291 PLQVKIKT 1298



>XP_006717666
          Length = 1289

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    PLQVVVKT 9
            PLQV +KT
Sbjct: 1145 PLQVKIKT 1152



>XP_005269535
          Length = 1435

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    PLQVVVKT 9
            PLQV +KT
Sbjct: 1291 PLQVKIKT 1298



>XP_006717665
          Length = 1435

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    PLQVVVKT 9
            PLQV +KT
Sbjct: 1291 PLQVKIKT 1298



>XP_005269533
          Length = 1435

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    PLQVVVKT 9
            PLQV +KT
Sbjct: 1291 PLQVKIKT 1298



>XP_005269534
          Length = 1435

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    PLQVVVKT 9
            PLQV +KT
Sbjct: 1291 PLQVKIKT 1298



>NP_001034200
          Length = 868

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   SPLQVVVKT 9
           SP +VVVK+
Sbjct: 574 SPFKVVVKS 582



>NP_056537
          Length = 217

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  PLQVVVKT 9
          P QVV+KT
Sbjct: 43 PDQVVIKT 50



>NP_055898
          Length = 1481

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PLQVVVKT 9
           P+QV VKT
Sbjct: 604 PVQVSVKT 611



>NP_057591
          Length = 1490

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PLQVVVKT 9
           P+QV VKT
Sbjct: 604 PVQVSVKT 611



>XP_006723058
          Length = 1460

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SPLQVVVK 8
           +P QVVVK
Sbjct: 157 TPAQVVVK 164



>XP_005257515
          Length = 1256

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PLQVVVKT 9
           P+QV VKT
Sbjct: 604 PVQVSVKT 611



>XP_005257513
          Length = 1489

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PLQVVVKT 9
           P+QV VKT
Sbjct: 603 PVQVSVKT 610



>XP_005252742
          Length = 217

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  PLQVVVKT 9
          P QVV+KT
Sbjct: 43 PDQVVIKT 50



>NP_001073903
          Length = 1489

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SPLQVVVK 8
           +P QVVVK
Sbjct: 186 TPAQVVVK 193



>NP_001258825
          Length = 588

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   SPLQVVV 7
           SP QVVV
Sbjct: 482 SPFQVVV 488



>NP_001258824
          Length = 636

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   SPLQVVV 7
           SP QVVV
Sbjct: 530 SPFQVVV 536



>NP_079426
          Length = 718

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   SPLQVVV 7
           SP QVVV
Sbjct: 612 SPFQVVV 618



>XP_006711619
          Length = 669

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   SPLQVVV 7
           SP QVVV
Sbjct: 563 SPFQVVV 569



>XP_006711618
          Length = 684

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   SPLQVVV 7
           SP QVVV
Sbjct: 578 SPFQVVV 584



>NP_055714
          Length = 611

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   PLQVVVK 8
           PL+V+VK
Sbjct: 326 PLRVIVK 332



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.312    0.125    0.319 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 479,977
Number of extensions: 657
Number of successful extensions: 27
Number of sequences better than 10000.0: 27
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 27
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.6 bits)
S2: 28 (15.4 bits)