Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000537                                                              20     299
NP_001263689                                                           20     299
NP_001119584                                                           20     299
NP_001119586                                                           20     299
NP_001263625                                                           20     299
NP_001119590                                                           20     299
NP_001263690                                                           20     299
NP_001119585                                                           20     299
NP_001263624                                                           20     299
NP_001119588                                                           20     299
NP_001119587                                                           20     299
NP_001119589                                                           20     299
NP_001159641                                                           19     665
NP_001191121                                                           18    1935
NP_001119713                                                           18    1935
NP_001191117                                                           18    1935
NP_001119712                                                           18    1935
NP_001119714                                                           18    1935
NP_005418                                                              18    1935
NP_001191116                                                           18    1935
NP_001191115                                                           18    1935
NP_001191119                                                           18    1935
NP_001191113                                                           18    1935
NP_001191118                                                           18    1935
NP_001191120                                                           18    1935
NP_001191114                                                           18    1935
NP_115642                                                              17    2528
NP_001059                                                              17    3301
XP_006724479                                                           17    3301
XP_006724478                                                           17    3301
XP_005265484                                                           17    3301
NP_004875                                                              17    3301
NP_003408                                                              17    4312
NP_001265097                                                           17    4312
NP_057492                                                              17    4312
NP_001265098                                                           17    4312
NP_001265096                                                           17    4312
NP_057166                                                              17    4312
XP_005259487                                                           17    4312
XP_006723570                                                           17    4312
NP_001171809                                                           16    5631
NP_001098713                                                           16    5631
NP_065817                                                              16    5631
NP_835455                                                              16    5631
NP_001171953                                                           16    5631
NP_001139281                                                           16    5631
NP_001070654                                                           16    5631
NP_079005                                                              16    5631
XP_006724302                                                           16    5631
XP_006723449                                                           16    5631
NP_037505                                                              16    5631
NP_006598                                                              16    5631
NP_004971                                                              16    7355
NP_751948                                                              16    7355
NP_612486                                                              16    7355
NP_490597                                                              16    7355
NP_055114                                                              16    7355
NP_001278253                                                           16    7355
NP_001177874                                                           16    7355
NP_005649                                                              16    7355
NP_001186512                                                           16    7355
NP_065855                                                              16    7355
NP_004827                                                              16    7355
NP_775733                                                              16    7355
XP_006722053                                                           16    7355
XP_006722052                                                           16    7355
XP_005254235                                                           16    7355
XP_005254233                                                           16    7355
XP_005254234                                                           16    7355
XP_005268242                                                           16    7355
XP_005268241                                                           16    7355
XP_005250570                                                           16    7355
XP_006710693                                                           16    7355
XP_006710692                                                           16    7355
XP_005270908                                                           16    7355
NP_065930                                                              16    7355
NP_002537                                                              15    9605
NP_004210                                                              15    9605
NP_001269311                                                           15    9605
NP_001269312                                                           15    9605
NP_003226                                                              15    9605
NP_653327                                                              15    9605
NP_001186312                                                           15    9605
NP_001186311                                                           15    9605
NP_001186310                                                           15    9605
NP_001186309                                                           15    9605
NP_005086                                                              15    9605
XP_005251100                                                           15    9605
XP_006716686                                                           15    9605
XP_005251099                                                           15    9605
XP_005251097                                                           15    9605
XP_005251095                                                           15    9605
XP_006716685                                                           15    9605
XP_005249641                                                           15    9605
XP_005265883                                                           15    9605
XP_005271388                                                           15    9605
XP_006711098                                                           15    9605
XP_006711097                                                           15    9605
XP_005271387                                                           15    9605
XP_005271385                                                           15    9605
NP_001140157                                                           15    9605
NP_066939                                                              15    9605
NP_061735                                                              15    9605
NP_114382                                                              15    9605
>NP_000537
          Length = 393

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   PGTRVRAM 9
           PGTRVRAM
Sbjct: 153 PGTRVRAM 160
>NP_001263689
          Length = 354

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   PGTRVRAM 9
           PGTRVRAM
Sbjct: 114 PGTRVRAM 121
>NP_001119584
          Length = 393

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   PGTRVRAM 9
           PGTRVRAM
Sbjct: 153 PGTRVRAM 160
>NP_001119586
          Length = 341

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   PGTRVRAM 9
           PGTRVRAM
Sbjct: 153 PGTRVRAM 160
>NP_001263625
          Length = 302

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   PGTRVRAM 9
           PGTRVRAM
Sbjct: 114 PGTRVRAM 121
>NP_001119590
          Length = 354

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   PGTRVRAM 9
           PGTRVRAM
Sbjct: 114 PGTRVRAM 121
>NP_001263690
          Length = 354

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   PGTRVRAM 9
           PGTRVRAM
Sbjct: 114 PGTRVRAM 121
>NP_001119585
          Length = 346

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   PGTRVRAM 9
           PGTRVRAM
Sbjct: 153 PGTRVRAM 160
>NP_001263624
          Length = 307

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   PGTRVRAM 9
           PGTRVRAM
Sbjct: 114 PGTRVRAM 121
>NP_001119588
          Length = 209

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2  PGTRVRAM 9
          PGTRVRAM
Sbjct: 21 PGTRVRAM 28
>NP_001119587
          Length = 261

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2  PGTRVRAM 9
          PGTRVRAM
Sbjct: 21 PGTRVRAM 28
>NP_001119589
          Length = 214

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2  PGTRVRAM 9
          PGTRVRAM
Sbjct: 21 PGTRVRAM 28
>NP_001159641
          Length = 338

 Score = 19.2 bits (38), Expect =   665
 Identities = 7/9 (77%), Positives = 9/9 (100%)

Query: 1  SPGTRVRAM 9
          SPGT+VRA+
Sbjct: 11 SPGTQVRAL 19
>NP_001191121
          Length = 565

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           PGT +RAM
Sbjct: 100 PGTAIRAM 107
>NP_001119713
          Length = 450

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           PGT +RAM
Sbjct: 122 PGTAIRAM 129
>NP_001191117
          Length = 540

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           PGT +RAM
Sbjct: 171 PGTAIRAM 178
>NP_001119712
          Length = 587

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           PGT +RAM
Sbjct: 122 PGTAIRAM 129
>NP_001119714
          Length = 426

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           PGT +RAM
Sbjct: 122 PGTAIRAM 129
>NP_005418
          Length = 636

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           PGT +RAM
Sbjct: 171 PGTAIRAM 178
>NP_001191116
          Length = 555

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           PGT +RAM
Sbjct: 171 PGTAIRAM 178
>NP_001191115
          Length = 403

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           PGT +RAM
Sbjct: 171 PGTAIRAM 178
>NP_001191119
          Length = 506

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           PGT +RAM
Sbjct: 122 PGTAIRAM 129
>NP_001191113
          Length = 499

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           PGT +RAM
Sbjct: 171 PGTAIRAM 178
>NP_001191118
          Length = 354

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           PGT +RAM
Sbjct: 122 PGTAIRAM 129
>NP_001191120
          Length = 491

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           PGT +RAM
Sbjct: 122 PGTAIRAM 129
>NP_001191114
          Length = 475

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           PGT +RAM
Sbjct: 171 PGTAIRAM 178
>NP_115642
          Length = 1984

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1    SPGTRVRA 8
            +PGTRV+A
Sbjct: 1505 TPGTRVQA 1512
>NP_001059
          Length = 1621

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    PGTRVR 7
            PGTRVR
Sbjct: 1305 PGTRVR 1310
>XP_006724479
          Length = 204

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   SPGTRVR 7
           SPG+RVR
Sbjct: 191 SPGSRVR 197
>XP_006724478
          Length = 272

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   SPGTRVR 7
           SPG+RVR
Sbjct: 259 SPGSRVR 265
>XP_005265484
          Length = 1626

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    PGTRVR 7
            PGTRVR
Sbjct: 1310 PGTRVR 1315
>NP_004875
          Length = 814

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   PGTRVR 7
           PGTRVR
Sbjct: 312 PGTRVR 317
>NP_003408
          Length = 627

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SPGTRVRA 8
           SPG RVR+
Sbjct: 177 SPGDRVRS 184
>NP_001265097
          Length = 510

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SPGTRVRA 8
           +PG RVRA
Sbjct: 468 NPGLRVRA 475
>NP_057492
          Length = 587

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SPGTRVRA 8
           +PG RVRA
Sbjct: 545 NPGLRVRA 552
>NP_001265098
          Length = 560

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SPGTRVRA 8
           +PG RVRA
Sbjct: 518 NPGLRVRA 525
>NP_001265096
          Length = 586

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SPGTRVRA 8
           +PG RVRA
Sbjct: 544 NPGLRVRA 551
>NP_057166
          Length = 588

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SPGTRVRA 8
           +PG RVRA
Sbjct: 546 NPGLRVRA 553
>XP_005259487
          Length = 628

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SPGTRVRA 8
           SPG RVR+
Sbjct: 178 SPGDRVRS 185
>XP_006723570
          Length = 627

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SPGTRVRA 8
           SPG RVR+
Sbjct: 177 SPGDRVRS 184
>NP_001171809
          Length = 1148

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   SPGTRV 6
           SPGTR+
Sbjct: 143 SPGTRI 148
>NP_001098713
          Length = 1101

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   SPGTRV 6
           SPGTR+
Sbjct: 143 SPGTRI 148
>NP_065817
          Length = 1100

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   SPGTRV 6
           SPGTR+
Sbjct: 143 SPGTRI 148
>NP_835455
          Length = 328

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SPGTRVRAM 9
           SPG R+R +
Sbjct: 133 SPGARLRGL 141
>NP_001171953
          Length = 778

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  SPGTRVR 7
          SPGTR++
Sbjct: 4  SPGTRLK 10
>NP_001139281
          Length = 2036

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    GTRVRAM 9
            G+RVRAM
Sbjct: 1393 GSRVRAM 1399
>NP_001070654
          Length = 2003

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    GTRVRAM 9
            G+RVRAM
Sbjct: 1360 GSRVRAM 1366
>NP_079005
          Length = 1995

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    GTRVRAM 9
            G+RVRAM
Sbjct: 1352 GSRVRAM 1358
>XP_006724302
          Length = 778

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  SPGTRVR 7
          SPGTR++
Sbjct: 4  SPGTRLK 10
>XP_006723449
          Length = 2003

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    GTRVRAM 9
            G+RVRAM
Sbjct: 1360 GSRVRAM 1366
>NP_037505
          Length = 765

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  SPGTRVR 7
          SPGTR++
Sbjct: 4  SPGTRLK 10
>NP_006598
          Length = 191

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  PGTRVRA 8
          PGTRV A
Sbjct: 14 PGTRVAA 20
>NP_004971
          Length = 655

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           P TR+R+M
Sbjct: 563 PATRLRSM 570
>NP_751948
          Length = 636

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           P TR+R+M
Sbjct: 544 PATRLRSM 551
>NP_612486
          Length = 1227

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GTRVRAM 9
           G+R+RAM
Sbjct: 482 GSRIRAM 488
>NP_490597
          Length = 1362

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  PGTRVR 7
          PGTR+R
Sbjct: 7  PGTRLR 12
>NP_055114
          Length = 722

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  PGTRVR 7
          PGTR+R
Sbjct: 7  PGTRLR 12
>NP_001278253
          Length = 2639

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    PGTRVRA 8
            PG+RVR+
Sbjct: 1028 PGSRVRS 1034

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2    PGTRVRA 8
            PGTRV A
Sbjct: 1977 PGTRVCA 1983
>NP_001177874
          Length = 416

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  SPGTRVR 7
          SPG+R+R
Sbjct: 66 SPGSRLR 72
>NP_005649
          Length = 416

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  SPGTRVR 7
          SPG+R+R
Sbjct: 66 SPGSRLR 72
>NP_001186512
          Length = 444

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SPGTRVRAM 9
           S G RVRA+
Sbjct: 385 SKGVRVRAL 393
>NP_065855
          Length = 444

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SPGTRVRAM 9
           S G RVRA+
Sbjct: 385 SKGVRVRAL 393
>NP_004827
          Length = 1116

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  SPGTRVRAM 9
          SPG  VRA+
Sbjct: 6  SPGLLVRAL 14
>NP_775733
          Length = 1251

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    SPGTRVR 7
            SPG R+R
Sbjct: 1029 SPGQRIR 1035
>XP_006722053
          Length = 2608

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    PGTRVRA 8
            PG+RVR+
Sbjct: 1028 PGSRVRS 1034

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2    PGTRVRA 8
            PGTRV A
Sbjct: 1946 PGTRVCA 1952
>XP_006722052
          Length = 2631

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    PGTRVRA 8
            PG+RVR+
Sbjct: 1028 PGSRVRS 1034

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2    PGTRVRA 8
            PGTRV A
Sbjct: 1977 PGTRVCA 1983
>XP_005254235
          Length = 1017

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GTRVRAM 9
           G+R+RAM
Sbjct: 483 GSRIRAM 489
>XP_005254233
          Length = 1228

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GTRVRAM 9
           G+R+RAM
Sbjct: 483 GSRIRAM 489
>XP_005254234
          Length = 1076

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GTRVRAM 9
           G+R+RAM
Sbjct: 483 GSRIRAM 489
>XP_005268242
          Length = 1285

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    SPGTRVR 7
            SPG R+R
Sbjct: 1063 SPGQRIR 1069
>XP_005268241
          Length = 1300

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    SPGTRVR 7
            SPG R+R
Sbjct: 1078 SPGQRIR 1084
>XP_005250570
          Length = 904

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  PGTRVRAM 9
          PGTR+ A+
Sbjct: 9  PGTRMAAL 16
>XP_006710693
          Length = 636

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           P TR+R+M
Sbjct: 544 PATRLRSM 551
>XP_006710692
          Length = 655

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           P TR+R+M
Sbjct: 563 PATRLRSM 570
>XP_005270908
          Length = 655

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           P TR+R+M
Sbjct: 563 PATRLRSM 570
>NP_065930
          Length = 955

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  PGTRVRAM 9
          PGTR+ A+
Sbjct: 60 PGTRMAAL 67
>NP_002537
          Length = 401

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   PGTRVRA 8
           PGT+V A
Sbjct: 228 PGTKVNA 234
>NP_004210
          Length = 202

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  PGTRVRA 8
          PGTRV A
Sbjct: 14 PGTRVVA 20
>NP_001269311
          Length = 202

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  PGTRVRA 8
          PGTRV A
Sbjct: 14 PGTRVVA 20
>NP_001269312
          Length = 202

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  PGTRVRA 8
          PGTRV A
Sbjct: 14 PGTRVVA 20
>NP_003226
          Length = 2768

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   PGTRVR 7
           PG+RVR
Sbjct: 647 PGSRVR 652
>NP_653327
          Length = 691

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   SPGTRVR 7
           +PGTR++
Sbjct: 645 TPGTRIQ 651
>NP_001186312
          Length = 663

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   SPGTRVR 7
           +PGTR++
Sbjct: 617 TPGTRIQ 623
>NP_001186311
          Length = 677

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   SPGTRVR 7
           +PGTR++
Sbjct: 631 TPGTRIQ 637
>NP_001186310
          Length = 680

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   SPGTRVR 7
           +PGTR++
Sbjct: 634 TPGTRIQ 640
>NP_001186309
          Length = 693

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   SPGTRVR 7
           +PGTR++
Sbjct: 647 TPGTRIQ 653
>NP_005086
          Length = 1548

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    PGTRVRAM 9
            PG RVR++
Sbjct: 1262 PGCRVRSI 1269
>XP_005251100
          Length = 2103

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   PGTRVR 7
           PG+RVR
Sbjct: 647 PGSRVR 652
>XP_006716686
          Length = 2111

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   PGTRVR 7
           PG+RVR
Sbjct: 647 PGSRVR 652
>XP_005251099
          Length = 2121

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   PGTRVR 7
           PG+RVR
Sbjct: 647 PGSRVR 652
>XP_005251097
          Length = 2178

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   PGTRVR 7
           PG+RVR
Sbjct: 647 PGSRVR 652
>XP_005251095
          Length = 2704

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   PGTRVR 7
           PG+RVR
Sbjct: 647 PGSRVR 652
>XP_006716685
          Length = 2747

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   PGTRVR 7
           PG+RVR
Sbjct: 647 PGSRVR 652
>XP_005249641
          Length = 979

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   SPGTRV 6
           +PGTRV
Sbjct: 560 TPGTRV 565
>XP_005265883
          Length = 679

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   SPGTRVR 7
           +PGTR++
Sbjct: 633 TPGTRIQ 639
>XP_005271388
          Length = 1224

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   PGTRVRAM 9
           PG RVR++
Sbjct: 938 PGCRVRSI 945
>XP_006711098
          Length = 1516

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    PGTRVRAM 9
            PG RVR++
Sbjct: 1230 PGCRVRSI 1237
>XP_006711097
          Length = 1542

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    PGTRVRAM 9
            PG RVR++
Sbjct: 1256 PGCRVRSI 1263
>XP_005271387
          Length = 1545

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    PGTRVRAM 9
            PG RVR++
Sbjct: 1259 PGCRVRSI 1266
>XP_005271385
          Length = 1551

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    PGTRVRAM 9
            PG RVR++
Sbjct: 1265 PGCRVRSI 1272
>NP_001140157
          Length = 163

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  SPGTRVRAM 9
          +PG R RA+
Sbjct: 90 APGPRCRAL 98
>NP_066939
          Length = 1119

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   SPGTRV 6
           +PGTRV
Sbjct: 560 TPGTRV 565
>NP_061735
          Length = 931

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   SPGTRV 6
           +PGTRV
Sbjct: 147 TPGTRV 152
>NP_114382
          Length = 823

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   SPGTRV 6
           +PGTRV
Sbjct: 147 TPGTRV 152
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.320    0.127    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 816,697
Number of extensions: 1063
Number of successful extensions: 107
Number of sequences better than 10000.0: 104
Number of HSP's gapped: 107
Number of HSP's successfully gapped: 107
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package