Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 19 665 NP_036462 19 665 NP_001243397 19 665 XP_005269721 19 665 NP_001098674 17 3301 XP_006711319 17 3301 XP_006711318 17 3301 XP_006711317 17 3301 NP_001098673 17 3301 NP_006729 17 4312 NP_009131 17 4312 XP_005254907 17 4312 XP_005254906 17 4312 XP_005254905 17 4312 XP_005254904 17 4312 XP_005254903 17 4312 XP_005254902 17 4312 XP_005254901 17 4312 XP_005254900 17 4312 XP_005254899 17 4312 XP_005254898 17 4312 XP_005254897 17 4312 XP_006720441 17 4312 XP_006720440 17 4312 XP_006720439 17 4312 XP_005254896 17 4312 NP_001718 16 5631 NP_065880 16 5631 NP_001129392 16 5631 NP_001193486 16 5631 XP_005262522 16 5631 XP_005262521 16 5631 XP_005251580 16 5631 NP_001136254 16 7355 NP_690864 16 7355 NP_065883 16 7355 XP_005245423 16 7355 XP_005245425 16 7355 XP_005270794 16 7355 NP_001159395 15 9605 NP_000449 15 9605 NP_066923 15 9605 NP_001185918 15 9605 NP_848594 15 9605 XP_006723283 15 9605 XP_005268181 15 9605 XP_006719330 15 9605 XP_005253911 15 9605 XP_006719329 15 9605 XP_006719328 15 9605 XP_005249675 15 9605 XP_006715711 15 9605 NP_001138906 15 9605>NP_001243398 Length = 1781 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SPDQSVISV 9 SPDQS ISV Sbjct: 1338 SPDQSAISV 1346>NP_036462 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SPDQSVISV 9 SPDQS ISV Sbjct: 1630 SPDQSAISV 1638>NP_001243397 Length = 1890 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SPDQSVISV 9 SPDQS ISV Sbjct: 1447 SPDQSAISV 1455>XP_005269721 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SPDQSVISV 9 SPDQS ISV Sbjct: 1630 SPDQSAISV 1638>NP_001098674 Length = 796 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPDQSVISV 9 SPD+S +SV Sbjct: 113 SPDESPVSV 121>XP_006711319 Length = 933 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPDQSVISV 9 SPD+S +SV Sbjct: 113 SPDESPVSV 121>XP_006711318 Length = 1039 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPDQSVISV 9 SPD+S +SV Sbjct: 113 SPDESPVSV 121>XP_006711317 Length = 1039 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPDQSVISV 9 SPD+S +SV Sbjct: 113 SPDESPVSV 121>NP_001098673 Length = 902 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SPDQSVISV 9 SPD+S +SV Sbjct: 113 SPDESPVSV 121>NP_006729 Length = 2817 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>NP_009131 Length = 2813 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>XP_005254907 Length = 2590 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 482 PDQAVIS 488>XP_005254906 Length = 2675 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 567 PDQAVIS 573>XP_005254905 Length = 2793 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>XP_005254904 Length = 2802 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>XP_005254903 Length = 2820 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>XP_005254902 Length = 2835 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>XP_005254901 Length = 2842 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>XP_005254900 Length = 2843 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>XP_005254899 Length = 2861 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>XP_005254898 Length = 2874 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>XP_005254897 Length = 2876 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>XP_006720441 Length = 2881 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>XP_006720440 Length = 2882 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>XP_006720439 Length = 2882 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>XP_005254896 Length = 2883 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PDQSVIS 8 PDQ+VIS Sbjct: 775 PDQAVIS 781>NP_001718 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SPDQSVISV 9 SP+Q++IS+ Sbjct: 8 SPNQTLISI 16>NP_065880 Length = 1423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPDQSVISV 9 SPD SV+ V Sbjct: 315 SPDNSVVIV 323>NP_001129392 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPDQSVISV 9 SPD SV+ V Sbjct: 315 SPDNSVVIV 323>NP_001193486 Length = 1386 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPDQSVISV 9 SPD SV+ V Sbjct: 315 SPDNSVVIV 323>XP_005262522 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SPDQSVISV 9 SP+Q++IS+ Sbjct: 8 SPNQTLISI 16>XP_005262521 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SPDQSVISV 9 SP+Q++IS+ Sbjct: 8 SPNQTLISI 16>XP_005251580 Length = 1422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPDQSVISV 9 SPD SV+ V Sbjct: 314 SPDNSVVIV 322>NP_001136254 Length = 1481 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDQSVISV 9 PD +VISV Sbjct: 1001 PDTAVISV 1008>NP_690864 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDQSVISV 9 PD +VISV Sbjct: 1001 PDTAVISV 1008>NP_065883 Length = 1237 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDQSVISV 9 PD SV+SV Sbjct: 77 PDISVVSV 84>XP_005245423 Length = 1246 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDQSVISV 9 PD SV+SV Sbjct: 86 PDISVVSV 93>XP_005245425 Length = 1299 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDQSVISV 9 PD SV+SV Sbjct: 139 PDISVVSV 146>XP_005270794 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDQSVISV 9 PD +VISV Sbjct: 1001 PDTAVISV 1008>NP_001159395 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPDQSVISV 9 SPD +ISV Sbjct: 371 SPDGKMISV 379>NP_000449 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPDQSVISV 9 SPD +ISV Sbjct: 397 SPDGKMISV 405>NP_066923 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PDQSVISV 9 PD S++SV Sbjct: 195 PDTSLVSV 202>NP_001185918 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PDQSVISV 9 PD S++SV Sbjct: 144 PDTSLVSV 151>NP_848594 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPDQSVISV 9 SP S+ISV Sbjct: 249 SPQSSMISV 257>XP_006723283 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDQSVISV 9 PD SVIS+ Sbjct: 51 PDLSVISM 58>XP_005268181 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SPDQSVIS 8 SP QSV++ Sbjct: 376 SPSQSVVT 383>XP_006719330 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPDQSVISV 9 SP S+ISV Sbjct: 249 SPQSSMISV 257>XP_005253911 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPDQSVISV 9 SP S+ISV Sbjct: 249 SPQSSMISV 257>XP_006719329 Length = 506 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPDQSVISV 9 SP S+ISV Sbjct: 249 SPQSSMISV 257>XP_006719328 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SPDQSVISV 9 SP S+ISV Sbjct: 249 SPQSSMISV 257>XP_005249675 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SPDQSVIS 8 SPD V+S Sbjct: 51 SPDMGVVS 58>XP_006715711 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SPDQSVIS 8 SPD V+S Sbjct: 51 SPDMGVVS 58>NP_001138906 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDQSVISV 9 PD SVIS+ Sbjct: 51 PDLSVISM 58Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.117 0.290 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 611,814 Number of extensions: 694 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |