Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 299 NP_002802 17 3301 NP_001278413 17 4312 NP_004354 17 4312 NP_001186317 17 4312 NP_001129026 17 4312 NP_001129027 17 4312 NP_001239589 17 4312 NP_001422 17 4312 NP_056127 17 4312 XP_005258472 17 4312 XP_006715431 17 4312 XP_006715430 17 4312 XP_006715429 17 4312 XP_006715428 17 4312 XP_006715427 17 4312 XP_006715426 17 4312 XP_006715425 17 4312 XP_006715424 17 4312 XP_006715423 17 4312 XP_006715422 17 4312 XP_006715421 17 4312 XP_006715420 17 4312 XP_005266898 17 4312 XP_005266897 17 4312 XP_006715419 17 4312 XP_006714407 17 4312 XP_006714406 17 4312 XP_005263347 17 4312 XP_005263346 17 4312 XP_005263345 17 4312 XP_005263344 17 4312 XP_005263343 17 4312 XP_005263342 17 4312 XP_005263341 17 4312 XP_005263340 17 4312 XP_005263339 17 4312 NP_078898 16 5631 NP_001268405 16 5631 NP_004824 16 5631 NP_002790 16 5631 XP_006712814 16 5631 XP_006712813 16 5631 NP_115830 16 7355 NP_001032961 16 7355 NP_004188 16 7355 NP_001002909 16 7355 NP_057400 16 7355 NP_116098 16 7355 XP_006721846 16 7355 XP_006721845 16 7355 XP_006721844 16 7355 XP_006718108 16 7355 XP_005264025 16 7355 XP_006712655 16 7355 NP_003001 15 9605 NP_001268364 15 9605 NP_694960 15 9605 NP_001131147 15 9605 NP_848664 15 9605 NP_006827 15 9605 NP_065923 15 9605 XP_006726423 15 9605 XP_006726404 15 9605 XP_006724953 15 9605 XP_005256812 15 9605 XP_006721631 15 9605 XP_005256810 15 9605 XP_005248314 15 9605 XP_005248313 15 9605 XP_005264814 15 9605 XP_006711770 15 9605 XP_005277402 15 9605 XP_006711155 15 9605>NP_004295 Length = 1620 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 NVATGRLP Sbjct: 1544 NVATGRLP 1551>NP_002802 Length = 324 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VATGRLP 9 VATG+LP Sbjct: 215 VATGKLP 221>NP_001278413 Length = 702 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SNVATGR 7 SN+ATGR Sbjct: 658 SNLATGR 664>NP_004354 Length = 702 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SNVATGR 7 SN+ATGR Sbjct: 658 SNLATGR 664>NP_001186317 Length = 852 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>NP_001129026 Length = 673 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>NP_001129027 Length = 673 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>NP_001239589 Length = 747 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>NP_001422 Length = 1005 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>NP_056127 Length = 5005 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NVATGRL 8 NV+TGRL Sbjct: 206 NVSTGRL 212>XP_005258472 Length = 420 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SNVATGR 7 SN+ATGR Sbjct: 376 SNLATGR 382>XP_006715431 Length = 673 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_006715430 Length = 706 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_006715429 Length = 730 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_006715428 Length = 747 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_006715427 Length = 838 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_006715426 Length = 852 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_006715425 Length = 935 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_006715424 Length = 1005 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_006715423 Length = 1023 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_006715422 Length = 1030 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_006715421 Length = 1039 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_006715420 Length = 1057 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_005266898 Length = 1113 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_005266897 Length = 1113 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_006715419 Length = 1113 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 ++A+GRLP Sbjct: 320 DIASGRLP 327>XP_006714407 Length = 5004 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NVATGRL 8 NV+TGRL Sbjct: 206 NVSTGRL 212>XP_006714406 Length = 3680 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NVATGRL 8 NV+TGRL Sbjct: 206 NVSTGRL 212>XP_005263347 Length = 4640 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NVATGRL 8 NV+TGRL Sbjct: 206 NVSTGRL 212>XP_005263346 Length = 4983 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NVATGRL 8 NV+TGRL Sbjct: 206 NVSTGRL 212>XP_005263345 Length = 4991 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NVATGRL 8 NV+TGRL Sbjct: 206 NVSTGRL 212>XP_005263344 Length = 5005 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NVATGRL 8 NV+TGRL Sbjct: 206 NVSTGRL 212>XP_005263343 Length = 5009 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NVATGRL 8 NV+TGRL Sbjct: 206 NVSTGRL 212>XP_005263342 Length = 5025 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NVATGRL 8 NV+TGRL Sbjct: 206 NVSTGRL 212>XP_005263341 Length = 5026 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NVATGRL 8 NV+TGRL Sbjct: 206 NVSTGRL 212>XP_005263340 Length = 5026 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NVATGRL 8 NV+TGRL Sbjct: 206 NVSTGRL 212>XP_005263339 Length = 5026 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NVATGRL 8 NV+TGRL Sbjct: 206 NVSTGRL 212>NP_078898 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NVATGRLP 9 N+A G+LP Sbjct: 748 NIALGQLP 755>NP_001268405 Length = 804 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NVATGRLP 9 N+A G+LP Sbjct: 705 NIALGQLP 712>NP_004824 Length = 343 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NVATGRL 8 N+ATG+L Sbjct: 34 NIATGKL 40>NP_002790 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVATGRLP 9 +++TGRLP Sbjct: 110 SLSTGRLP 117>XP_006712814 Length = 527 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NVATGRLP 9 N+A G+LP Sbjct: 428 NIALGQLP 435>XP_006712813 Length = 824 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NVATGRLP 9 N+A G+LP Sbjct: 725 NIALGQLP 732>NP_115830 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SNVATGRLP 9 +NVATG P Sbjct: 36 TNVATGAPP 44>NP_001032961 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SNVATGRLP 9 SN TGR P Sbjct: 448 SNRGTGRAP 456>NP_004188 Length = 364 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SNVATGRLP 9 +NVATG P Sbjct: 36 TNVATGAPP 44>NP_001002909 Length = 1502 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SNVATGR 7 SN+ TGR Sbjct: 1068 SNIGTGR 1074>NP_057400 Length = 1251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SNVATGRLP 9 SN TGR P Sbjct: 448 SNRGTGRAP 456>NP_116098 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NVATGRLP 9 NVA RLP Sbjct: 378 NVAVDRLP 385>XP_006721846 Length = 1424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SNVATGR 7 SN+ TGR Sbjct: 990 SNIGTGR 996>XP_006721845 Length = 1424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SNVATGR 7 SN+ TGR Sbjct: 990 SNIGTGR 996>XP_006721844 Length = 1424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SNVATGR 7 SN+ TGR Sbjct: 990 SNIGTGR 996>XP_006718108 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NVATGRLP 9 NVA RLP Sbjct: 378 NVAVDRLP 385>XP_005264025 Length = 1181 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SNVATGRLP 9 SN TGR P Sbjct: 378 SNRGTGRAP 386>XP_006712655 Length = 1251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SNVATGRLP 9 SN TGR P Sbjct: 448 SNRGTGRAP 456>NP_003001 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VATGRLP 9 +ATGR P Sbjct: 300 LATGRFP 306>NP_001268364 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VATGRLP 9 +ATGR P Sbjct: 311 LATGRFP 317>NP_694960 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NVATGRLP 9 N +TG+LP Sbjct: 46 NESTGQLP 53>NP_001131147 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SNVATGRLP 9 +N+AT LP Sbjct: 164 ANLATSHLP 172>NP_848664 Length = 138 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VATGRLP 9 +A+GRLP Sbjct: 36 LASGRLP 42>NP_006827 Length = 2671 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NVATGRL 8 NVA GRL Sbjct: 2494 NVAPGRL 2500>NP_065923 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NVATGRL 8 NVA GRL Sbjct: 306 NVARGRL 312>XP_006726423 Length = 3768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATGRLP 9 +TGRLP Sbjct: 5 STGRLP 10>XP_006726404 Length = 1355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATGRLP 9 +TGRLP Sbjct: 5 STGRLP 10>XP_006724953 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATGRLP 9 +TGRLP Sbjct: 5 STGRLP 10>XP_005256812 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VATGRLP 9 +ATGR P Sbjct: 154 LATGRFP 160>XP_006721631 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VATGRLP 9 +ATGR P Sbjct: 182 LATGRFP 188>XP_005256810 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VATGRLP 9 +ATGR P Sbjct: 182 LATGRFP 188>XP_005248314 Length = 113 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VATGRLP 9 +A+GRLP Sbjct: 36 LASGRLP 42>XP_005248313 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VATGRLP 9 +A+GRLP Sbjct: 36 LASGRLP 42>XP_005264814 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NVATGRL 8 NVA GRL Sbjct: 306 NVARGRL 312>XP_006711770 Length = 3768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATGRLP 9 +TGRLP Sbjct: 5 STGRLP 10>XP_005277402 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATGRLP 9 +TGRLP Sbjct: 5 STGRLP 10>XP_006711155 Length = 1355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATGRLP 9 +TGRLP Sbjct: 5 STGRLP 10Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.126 0.356 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 482,075 Number of extensions: 662 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |