Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001156685 19 665 NP_000133 19 665 NP_075254 19 665 XP_006713936 19 665 XP_006713935 19 665 XP_006713934 19 665 XP_006713933 19 665 XP_006713932 19 665 XP_006713931 19 665 NP_002829 16 5631 XP_006711538 16 5631 XP_006711536 16 5631 NP_689842 16 7355 NP_036553 16 7355 NP_001035878 16 7355 XP_006716794 16 7355 XP_005251446 16 7355 XP_005251445 16 7355 XP_005251444 16 7355 XP_005251443 16 7355 NP_001195 15 9605 NP_001184033 15 9605 NP_005924 15 9605 NP_079410 15 9605 NP_060395 15 9605 NP_056346 15 9605 NP_001273506 15 9605 NP_079286 15 9605 XP_005256231 15 9605 XP_005256229 15 9605 XP_005256228 15 9605 XP_005256227 15 9605 XP_006721346 15 9605 XP_005256226 15 9605 XP_006721345 15 9605 XP_006721344 15 9605 XP_006721343 15 9605 XP_005256225 15 9605 XP_006718903 15 9605 XP_006718902 15 9605 XP_005273954 15 9605 XP_006718558 15 9605 XP_005273953 15 9605 XP_005273952 15 9605 XP_005273950 15 9605 XP_006716870 15 9605 XP_006716869 15 9605 XP_006716868 15 9605 XP_006716867 15 9605 XP_006713142 15 9605 XP_005265060 15 9605 XP_005265059 15 9605 XP_005265058 15 9605>NP_001156685 Length = 808 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNTSMSSNT 9 SN SMSSNT Sbjct: 429 SNASMSSNT 437>NP_000133 Length = 806 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNTSMSSNT 9 SN SMSSNT Sbjct: 427 SNASMSSNT 435>NP_075254 Length = 694 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNTSMSSNT 9 SN SMSSNT Sbjct: 315 SNASMSSNT 323>XP_006713936 Length = 807 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNTSMSSNT 9 SN SMSSNT Sbjct: 427 SNASMSSNT 435>XP_006713935 Length = 807 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNTSMSSNT 9 SN SMSSNT Sbjct: 428 SNASMSSNT 436>XP_006713934 Length = 809 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNTSMSSNT 9 SN SMSSNT Sbjct: 429 SNASMSSNT 437>XP_006713933 Length = 810 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNTSMSSNT 9 SN SMSSNT Sbjct: 430 SNASMSSNT 438>XP_006713932 Length = 810 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNTSMSSNT 9 SN SMSSNT Sbjct: 431 SNASMSSNT 439>XP_006713931 Length = 811 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNTSMSSNT 9 SN SMSSNT Sbjct: 431 SNASMSSNT 439>NP_002829 Length = 1306 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SNTSMSSNT 9 SNT++++NT Sbjct: 185 SNTTITANT 193>XP_006711538 Length = 1189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SNTSMSSNT 9 SNT++++NT Sbjct: 68 SNTTITANT 76>XP_006711536 Length = 1240 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SNTSMSSNT 9 SNT++++NT Sbjct: 119 SNTTITANT 127>NP_689842 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSMSSNT 9 TSMSSN+ Sbjct: 103 TSMSSNS 109>NP_036553 Length = 1914 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNTSMSSN 8 SN+S SSN Sbjct: 1799 SNSSQSSN 1806>NP_001035878 Length = 930 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSMSSNT 9 TSMSSN+ Sbjct: 258 TSMSSNS 264>XP_006716794 Length = 572 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSMSSNT 9 TSMSSN+ Sbjct: 258 TSMSSNS 264>XP_005251446 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSMSSNT 9 TSMSSN+ Sbjct: 258 TSMSSNS 264>XP_005251445 Length = 708 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSMSSNT 9 TSMSSN+ Sbjct: 36 TSMSSNS 42>XP_005251444 Length = 708 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSMSSNT 9 TSMSSN+ Sbjct: 36 TSMSSNS 42>XP_005251443 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TSMSSNT 9 TSMSSN+ Sbjct: 103 TSMSSNS 109>NP_001195 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SNTSMSSNT 9 S TS+S+NT Sbjct: 604 SVTSLSTNT 612>NP_001184033 Length = 3972 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NTSMSSN 8 NTS SSN Sbjct: 2262 NTSTSSN 2268>NP_005924 Length = 3969 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NTSMSSN 8 NTS SSN Sbjct: 2259 NTSTSSN 2265>NP_079410 Length = 2881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTSMSSN 8 NTS++SN Sbjct: 329 NTSLNSN 335>NP_060395 Length = 1909 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NTSMSS 7 NTSMSS Sbjct: 1473 NTSMSS 1478>NP_056346 Length = 1963 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NTSMSSNT 9 NT +S NT Sbjct: 711 NTKLSGNT 718>NP_001273506 Length = 2353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NTSMSSNT 9 NT +S NT Sbjct: 711 NTKLSGNT 718>NP_079286 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TSMSSN 8 TSMSSN Sbjct: 414 TSMSSN 419>XP_005256231 Length = 2573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTSMSSN 8 NTS++SN Sbjct: 329 NTSLNSN 335>XP_005256229 Length = 2881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTSMSSN 8 NTS++SN Sbjct: 329 NTSLNSN 335>XP_005256228 Length = 2882 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTSMSSN 8 NTS++SN Sbjct: 329 NTSLNSN 335>XP_005256227 Length = 2897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTSMSSN 8 NTS++SN Sbjct: 329 NTSLNSN 335>XP_006721346 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTSMSSN 8 NTS++SN Sbjct: 329 NTSLNSN 335>XP_005256226 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTSMSSN 8 NTS++SN Sbjct: 329 NTSLNSN 335>XP_006721345 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTSMSSN 8 NTS++SN Sbjct: 329 NTSLNSN 335>XP_006721344 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTSMSSN 8 NTS++SN Sbjct: 329 NTSLNSN 335>XP_006721343 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTSMSSN 8 NTS++SN Sbjct: 329 NTSLNSN 335>XP_005256225 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTSMSSN 8 NTS++SN Sbjct: 329 NTSLNSN 335>XP_006718903 Length = 2673 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NTSMSSN 8 NTS SSN Sbjct: 963 NTSTSSN 969>XP_006718902 Length = 2964 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NTSMSSN 8 NTS SSN Sbjct: 1254 NTSTSSN 1260>XP_005273954 Length = 1676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NTSMSSNT 9 NT +S NT Sbjct: 711 NTKLSGNT 718>XP_006718558 Length = 1841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NTSMSSNT 9 NT +S NT Sbjct: 198 NTKLSGNT 205>XP_005273953 Length = 2171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NTSMSSNT 9 NT +S NT Sbjct: 528 NTKLSGNT 535>XP_005273952 Length = 2245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NTSMSSNT 9 NT +S NT Sbjct: 602 NTKLSGNT 609>XP_005273950 Length = 2354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NTSMSSNT 9 NT +S NT Sbjct: 711 NTKLSGNT 718>XP_006716870 Length = 1456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NTSMSS 7 NTSMSS Sbjct: 1020 NTSMSS 1025>XP_006716869 Length = 1722 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NTSMSS 7 NTSMSS Sbjct: 1286 NTSMSS 1291>XP_006716868 Length = 1894 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NTSMSS 7 NTSMSS Sbjct: 1522 NTSMSS 1527>XP_006716867 Length = 1958 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NTSMSS 7 NTSMSS Sbjct: 1522 NTSMSS 1527>XP_006713142 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TSMSSN 8 TSMSSN Sbjct: 359 TSMSSN 364>XP_005265060 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TSMSSN 8 TSMSSN Sbjct: 479 TSMSSN 484>XP_005265059 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TSMSSN 8 TSMSSN Sbjct: 479 TSMSSN 484>XP_005265058 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TSMSSN 8 TSMSSN Sbjct: 484 TSMSSN 489Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.263 0.0758 0.161 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 287,464 Number of extensions: 449 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 19 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |