Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 18 1135 NP_116213 16 5631 XP_005253413 16 5631 XP_005253412 16 5631 XP_005263884 16 5631 XP_006712870 16 5631 NP_001635 16 5631 NP_001231892 16 7355 NP_001104488 16 7355 NP_660093 16 7355 NP_065831 16 7355 NP_892009 16 7355 XP_006718429 16 7355 XP_006718428 16 7355 XP_006718427 16 7355 NP_004855 15 9605 NP_001274745 15 9605 NP_055662 15 9605 NP_002536 15 9605 NP_001012393 15 9605 NP_005796 15 9605 XP_005271636 15 9605 XP_005271635 15 9605 XP_005271632 15 9605 XP_006718909 15 9605 XP_005271631 15 9605 XP_006711752 15 9605 XP_006711751 15 9605 XP_006711750 15 9605 XP_006711749 15 9605 XP_005245729 15 9605 XP_005245727 15 9605 XP_005245726 15 9605 XP_005245725 15 9605 XP_005245724 15 9605 XP_005245715 15 9605 XP_006711748 15 9605 XP_006711747 15 9605 XP_006711746 15 9605 XP_006711745 15 9605 XP_006711744 15 9605 XP_006711743 15 9605 XP_006711742 15 9605>NP_004110 Length = 993 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNTGVSIQV 9 S TGVSIQV Sbjct: 633 SKTGVSIQV 641>NP_116213 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNTGVSIQ 8 SNTG+S Q Sbjct: 274 SNTGLSTQ 281>XP_005253413 Length = 191 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NTGVSIQV 9 N+GV+IQ+ Sbjct: 91 NSGVTIQI 98>XP_005253412 Length = 236 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NTGVSIQV 9 N+GV+IQ+ Sbjct: 136 NSGVTIQI 143>XP_005263884 Length = 554 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNTGVSIQ 8 SNTG+S Q Sbjct: 273 SNTGLSTQ 280>XP_006712870 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNTGVSIQ 8 SNTG+S Q Sbjct: 274 SNTGLSTQ 281>NP_001635 Length = 236 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NTGVSIQV 9 N+GV+IQ+ Sbjct: 136 NSGVTIQI 143>NP_001231892 Length = 2488 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNTGVSIQ 8 S+TGVS++ Sbjct: 715 SSTGVSVE 722>NP_001104488 Length = 2365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNTGVSIQ 8 S+TGVS++ Sbjct: 628 SSTGVSVE 635>NP_660093 Length = 2429 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNTGVSIQ 8 S+TGVS++ Sbjct: 692 SSTGVSVE 699>NP_065831 Length = 1392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVSI Sbjct: 1325 NTGVSI 1330>NP_892009 Length = 2432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNTGVSIQ 8 S+TGVS++ Sbjct: 692 SSTGVSVE 699>XP_006718429 Length = 2416 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNTGVSIQ 8 S+TGVS++ Sbjct: 643 SSTGVSVE 650>XP_006718428 Length = 2455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNTGVSIQ 8 S+TGVS++ Sbjct: 715 SSTGVSVE 722>XP_006718427 Length = 2465 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNTGVSIQ 8 S+TGVS++ Sbjct: 692 SSTGVSVE 699>NP_004855 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNTGVSIQ 8 ++TGVS+Q Sbjct: 288 TDTGVSLQ 295>NP_001274745 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 977 NTGVSV 982>NP_055662 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 966 NTGVSV 971>NP_002536 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 231 NTGVSV 236>NP_001012393 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 224 NTGVSV 229>NP_005796 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SNTGVSIQ 8 S TGVS++ Sbjct: 78 SGTGVSVE 85>XP_005271636 Length = 207 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 93 NTGVSV 98>XP_005271635 Length = 245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 131 NTGVSV 136>XP_005271632 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 231 NTGVSV 236>XP_006718909 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 223 NTGVSV 228>XP_005271631 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 230 NTGVSV 235>XP_006711752 Length = 1085 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 966 NTGVSV 971>XP_006711751 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 626 NTGVSV 631>XP_006711750 Length = 930 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 736 NTGVSV 741>XP_006711749 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 771 NTGVSV 776>XP_005245729 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 966 NTGVSV 971>XP_005245727 Length = 1079 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 977 NTGVSV 982>XP_005245726 Length = 1095 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 977 NTGVSV 982>XP_005245725 Length = 1096 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 977 NTGVSV 982>XP_005245724 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 977 NTGVSV 982>XP_005245715 Length = 1115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 977 NTGVSV 982>XP_006711748 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 966 NTGVSV 971>XP_006711747 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 966 NTGVSV 971>XP_006711746 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 966 NTGVSV 971>XP_006711745 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 977 NTGVSV 982>XP_006711744 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 977 NTGVSV 982>XP_006711743 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 977 NTGVSV 982>XP_006711742 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTGVSI 7 NTGVS+ Sbjct: 977 NTGVSV 982Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.117 0.282 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 495,895 Number of extensions: 746 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |