Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 20 509 NP_001087241 20 509 XP_006714101 20 509 XP_005265799 20 509 XP_005265798 20 509 XP_005265797 20 509 NP_851322 17 3301 NP_001035545 17 4312 NP_001314 16 5631 NP_005273 16 5631 NP_001139317 16 7355 NP_598334 16 7355 NP_002932 16 7355 NP_001276968 16 7355 NP_001276969 16 7355 NP_001122401 16 7355 NP_002933 16 7355 NP_071765 16 7355 NP_817089 16 7355 XP_005265887 16 7355 XP_006713342 16 7355 XP_006713341 16 7355 XP_006713340 16 7355 XP_006713339 16 7355 NP_004937 16 7355 NP_039225 15 9605 NP_115604 15 9605 XP_005275582 15 9605 XP_005275581 15 9605 XP_005275423 15 9605 XP_005275422 15 9605 XP_005275288 15 9605 XP_005275287 15 9605 XP_005275147 15 9605 XP_005275146 15 9605 XP_005274992 15 9605 XP_005274991 15 9605 XP_005272846 15 9605 XP_005272845 15 9605 XP_005274901 15 9605 XP_005274900 15 9605 XP_005249059 15 9605 XP_005249058 15 9605 XP_001717126 15 9605>NP_000213 Length = 976 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNSIYVFV 8 SNSIYVFV Sbjct: 104 SNSIYVFV 111>NP_001087241 Length = 972 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNSIYVFV 8 SNSIYVFV Sbjct: 104 SNSIYVFV 111>XP_006714101 Length = 526 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNSIYVFV 8 SNSIYVFV Sbjct: 104 SNSIYVFV 111>XP_005265799 Length = 973 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNSIYVFV 8 SNSIYVFV Sbjct: 104 SNSIYVFV 111>XP_005265798 Length = 976 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNSIYVFV 8 SNSIYVFV Sbjct: 104 SNSIYVFV 111>XP_005265797 Length = 977 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNSIYVFV 8 SNSIYVFV Sbjct: 104 SNSIYVFV 111>NP_851322 Length = 724 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNSIYVFVI 9 SN +YVF++ Sbjct: 226 SNYLYVFIL 234>NP_001035545 Length = 832 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SNSIYVFVI 9 SNS YV V+ Sbjct: 240 SNSFYVVVV 248>NP_001314 Length = 149 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SNSIYVF 7 SNSIY F Sbjct: 63 SNSIYYF 69>NP_005273 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 S+Y+FVI Sbjct: 22 SLYIFVI 28>NP_001139317 Length = 1551 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NSIYVFVI 9 N+IY+F++ Sbjct: 591 NAIYLFLV 598>NP_598334 Length = 1606 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NSIYVFVI 9 N+IY+F++ Sbjct: 591 NAIYLFLV 598>NP_002932 Length = 1651 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NSIYVFVI 9 N+IY+F++ Sbjct: 627 NAIYLFLV 634>NP_001276968 Length = 1382 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NSIYVFVI 9 N+IY+F++ Sbjct: 592 NTIYLFMV 599>NP_001276969 Length = 1443 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NSIYVFVI 9 N+IY+F++ Sbjct: 592 NTIYLFMV 599>NP_001122401 Length = 1394 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NSIYVFVI 9 N+IY+F++ Sbjct: 604 NTIYLFMV 611>NP_002933 Length = 1378 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NSIYVFVI 9 N+IY+F++ Sbjct: 588 NTIYLFMV 595>NP_071765 Length = 1386 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NSIYVFVI 9 N+IY+F++ Sbjct: 622 NTIYLFLV 629>NP_817089 Length = 832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SNSIYVFVI 9 +NS YV +I Sbjct: 462 NNSFYVIII 470>XP_005265887 Length = 939 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNSIYVFV 8 ++S+YVFV Sbjct: 220 THSLYVFV 227>XP_006713342 Length = 1205 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NSIYVFVI 9 N+IY+F++ Sbjct: 608 NTIYLFMV 615>XP_006713341 Length = 1600 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NSIYVFVI 9 N+IY+F++ Sbjct: 576 NAIYLFLV 583>XP_006713340 Length = 1615 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NSIYVFVI 9 N+IY+F++ Sbjct: 591 NAIYLFLV 598>XP_006713339 Length = 1616 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NSIYVFVI 9 N+IY+F++ Sbjct: 592 NAIYLFLV 599>NP_004937 Length = 1830 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNSIYVFV 8 ++S+YVFV Sbjct: 220 THSLYVFV 227>NP_039225 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>NP_115604 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NSIYVFV 8 NS+YV V Sbjct: 38 NSVYVLV 44>XP_005275582 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005275581 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005275423 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005275422 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005275288 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005275287 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005275147 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005275146 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005274992 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005274991 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005272846 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005272845 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005274901 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005274900 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005249059 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_005249058 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIYVFVI 9 ++YVF+I Sbjct: 35 AVYVFII 41>XP_001717126 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SNSIYVFV 8 SNS Y++V Sbjct: 524 SNSTYLYV 531Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.145 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 383,381 Number of extensions: 662 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |