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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_008835                                                              20     390
NP_001075109                                                           20     390
NP_057355                                                              17    2528
NP_001178253                                                           17    2528
XP_005258342                                                           17    2528
NP_002680                                                              17    4312
NP_062550                                                              16    5631
NP_078966                                                              15    9605
NP_001122089                                                           15    9605
NP_114128                                                              15    9605
NP_001273540                                                           15    9605
NP_055589                                                              15    9605
NP_004834                                                              15    9605
XP_005267236                                                           15    9605
XP_005267235                                                           15    9605
XP_006715650                                                           15    9605
XP_005267234                                                           15    9605
NP_006502                                                              15    9605

>NP_008835
          Length = 4128

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SNRTETVTS 9
            +NRTETVTS
Sbjct: 3862 ANRTETVTS 3870



>NP_001075109
          Length = 4097

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SNRTETVTS 9
            +NRTETVTS
Sbjct: 3831 ANRTETVTS 3839



>NP_057355
          Length = 245

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   SNRTETVTS 9
           SNR+ET TS
Sbjct: 131 SNRSETSTS 139



>NP_001178253
          Length = 245

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   SNRTETVTS 9
           SNR+ET TS
Sbjct: 131 SNRSETSTS 139



>XP_005258342
          Length = 199

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1  SNRTETVTS 9
          SNR+ET TS
Sbjct: 85 SNRSETSTS 93



>NP_002680
          Length = 598

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   SNRTETVTS 9
           SNR E VTS
Sbjct: 165 SNRGEVVTS 173



>NP_062550
          Length = 393

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  SNRTETVT 8
          +N TET+T
Sbjct: 20 TNHTETIT 27



>NP_078966
          Length = 14507

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    NRTETVTS 9
            +RTE +TS
Sbjct: 5815 SRTEVITS 5822



>NP_001122089
          Length = 769

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   NRTETVTS 9
           NRT TVT+
Sbjct: 539 NRTFTVTT 546



>NP_114128
          Length = 795

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   NRTETVTS 9
           NRT TVT+
Sbjct: 565 NRTFTVTT 572



>NP_001273540
          Length = 796

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   NRTETVTS 9
           NRT TVT+
Sbjct: 566 NRTFTVTT 573



>NP_055589
          Length = 495

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   SNRTETV 7
           +NRT+TV
Sbjct: 346 TNRTDTV 352



>NP_004834
          Length = 636

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  SNRTETV 7
          SN+T+TV
Sbjct: 75 SNKTQTV 81



>XP_005267236
          Length = 768

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   NRTETVTS 9
           NRT TVT+
Sbjct: 538 NRTFTVTT 545



>XP_005267235
          Length = 773

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   NRTETVTS 9
           NRT TVT+
Sbjct: 566 NRTFTVTT 573



>XP_006715650
          Length = 775

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   NRTETVTS 9
           NRT TVT+
Sbjct: 545 NRTFTVTT 552



>XP_005267234
          Length = 795

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   NRTETVTS 9
           NRT TVT+
Sbjct: 565 NRTFTVTT 572



>NP_006502
          Length = 617

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   NRTETVTS 9
           NR+ TVTS
Sbjct: 470 NRSVTVTS 477



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.282   0.0937    0.211 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 354,162
Number of extensions: 666
Number of successful extensions: 18
Number of sequences better than 10000.0: 18
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 18
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 18 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (14.8 bits)
S2: 28 (15.4 bits)