Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004324 20 299 XP_005250103 20 299 XP_005250102 20 299 NP_056374 16 5631 NP_003694 16 5631 NP_060959 16 5631 XP_006722501 16 5631 XP_005258301 16 5631 XP_005258300 16 5631 XP_006713992 16 5631 XP_005245394 16 5631 XP_005245393 16 5631 XP_006711515 16 5631 XP_006711514 16 5631 XP_006711513 16 5631 NP_775821 16 7355 NP_005286 16 7355 NP_665803 16 7355 XP_005251455 16 7355 XP_005251456 16 7355 XP_005251454 16 7355 NP_001258754 15 9605 NP_001258753 15 9605 NP_004559 15 9605 NP_002010 15 9605 NP_001153392 15 9605 NP_116195 15 9605 NP_057095 15 9605 NP_001182220 15 9605 NP_001258752 15 9605 NP_778203 15 9605 NP_001258751 15 9605 NP_001153502 15 9605 NP_001834 15 9605 NP_001019903 15 9605 XP_006719777 15 9605 XP_006719304 15 9605 XP_005268708 15 9605 XP_006715176 15 9605 XP_006715175 15 9605 XP_005249238 15 9605 XP_006713424 15 9605 XP_005265572 15 9605 XP_005245943 15 9605 XP_006710737 15 9605 XP_005245946 15 9605 XP_005245945 15 9605 XP_005245944 15 9605 XP_005245942 15 9605 NP_055632 15 9605 NP_065090 15 9605>NP_004324 Length = 766 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NRMKTLGR 9 NRMKTLGR Sbjct: 436 NRMKTLGR 443>XP_005250103 Length = 758 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NRMKTLGR 9 NRMKTLGR Sbjct: 436 NRMKTLGR 443>XP_005250102 Length = 767 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NRMKTLGR 9 NRMKTLGR Sbjct: 436 NRMKTLGR 443>NP_056374 Length = 1596 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N+MKTL R Sbjct: 667 NKMKTLKR 674>NP_003694 Length = 857 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SNRMKT 6 SNRMKT Sbjct: 269 SNRMKT 274>NP_060959 Length = 2964 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N+MKTL R Sbjct: 987 NKMKTLKR 994>XP_006722501 Length = 1403 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N+MKTL R Sbjct: 667 NKMKTLKR 674>XP_005258301 Length = 1539 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N+MKTL R Sbjct: 667 NKMKTLKR 674>XP_005258300 Length = 1596 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N+MKTL R Sbjct: 667 NKMKTLKR 674>XP_006713992 Length = 857 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SNRMKT 6 SNRMKT Sbjct: 269 SNRMKT 274>XP_005245394 Length = 1741 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N+MKTL R Sbjct: 987 NKMKTLKR 994>XP_005245393 Length = 2663 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N+MKTL R Sbjct: 987 NKMKTLKR 994>XP_006711515 Length = 2904 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N+MKTL R Sbjct: 987 NKMKTLKR 994>XP_006711514 Length = 2964 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N+MKTL R Sbjct: 987 NKMKTLKR 994>XP_006711513 Length = 2964 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N+MKTL R Sbjct: 987 NKMKTLKR 994>NP_775821 Length = 1326 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNRMKTLGR 9 +NR+K LG+ Sbjct: 811 ANRLKILGQ 819>NP_005286 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNRMKTLGR 9 +NR+ T+GR Sbjct: 148 ANRILTMGR 156>NP_665803 Length = 1025 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SNRMKTL 7 SNR KTL Sbjct: 867 SNRFKTL 873>XP_005251455 Length = 1334 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNRMKTLGR 9 +NR+K LG+ Sbjct: 819 ANRLKILGQ 827>XP_005251456 Length = 1334 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNRMKTLGR 9 +NR+K LG+ Sbjct: 819 ANRLKILGQ 827>XP_005251454 Length = 1334 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNRMKTLGR 9 +NR+K LG+ Sbjct: 819 ANRLKILGQ 827>NP_001258754 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N +KTLG+ Sbjct: 14 NLLKTLGK 21>NP_001258753 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N +KTLG+ Sbjct: 14 NLLKTLGK 21>NP_004559 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N +KTLG+ Sbjct: 14 NLLKTLGK 21>NP_002010 Length = 1338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNRMKTLGR 9 SN++ T+GR Sbjct: 538 SNKVGTVGR 546>NP_001153392 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNRMKTLGR 9 SN++ T+GR Sbjct: 538 SNKVGTVGR 546>NP_116195 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RMKTLGR 9 ++KTLGR Sbjct: 219 QLKTLGR 225>NP_057095 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNRMKTLG 8 S+R+K+LG Sbjct: 225 SDRLKSLG 232>NP_001182220 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N +KTLG+ Sbjct: 18 NLLKTLGK 25>NP_001258752 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N +KTLG+ Sbjct: 33 NLLKTLGK 40>NP_778203 Length = 1007 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNRMKTLG 8 SNR+KT G Sbjct: 685 SNRIKTDG 692>NP_001258751 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N +KTLG+ Sbjct: 28 NLLKTLGK 35>NP_001153502 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNRMKTLGR 9 SN++ T+GR Sbjct: 538 SNKVGTVGR 546>NP_001834 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNRMKTLG 8 SNR+KT G Sbjct: 696 SNRIKTDG 703>NP_001019903 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNRMKTLG 8 S+R+K+LG Sbjct: 149 SDRLKSLG 156>XP_006719777 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SNRMKTLGR 9 +NR K LG+ Sbjct: 410 TNRQKLLGK 418>XP_006719304 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNRMKTLG 8 SNR+KT G Sbjct: 696 SNRIKTDG 703>XP_005268708 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNRMKTLG 8 SNR+KT G Sbjct: 696 SNRIKTDG 703>XP_006715176 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N +KTLG+ Sbjct: 18 NLLKTLGK 25>XP_006715175 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N +KTLG+ Sbjct: 18 NLLKTLGK 25>XP_005249238 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NRMKTLGR 9 N +KTLG+ Sbjct: 47 NLLKTLGK 54>XP_006713424 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RMKTLGR 9 ++KTLGR Sbjct: 219 QLKTLGR 225>XP_005265572 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RMKTLGR 9 ++KTLGR Sbjct: 219 QLKTLGR 225>XP_005245943 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNRMKTLG 8 S+R+K+LG Sbjct: 149 SDRLKSLG 156>XP_006710737 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNRMKTLG 8 S+R+K+LG Sbjct: 149 SDRLKSLG 156>XP_005245946 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNRMKTLG 8 S+R+K+LG Sbjct: 149 SDRLKSLG 156>XP_005245945 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNRMKTLG 8 S+R+K+LG Sbjct: 149 SDRLKSLG 156>XP_005245944 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNRMKTLG 8 S+R+K+LG Sbjct: 149 SDRLKSLG 156>XP_005245942 Length = 401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNRMKTLG 8 S+R+K+LG Sbjct: 253 SDRLKSLG 260>NP_055632 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNRMKTLGR 9 SNR++ LG+ Sbjct: 188 SNRIRFLGK 196>NP_065090 Length = 178 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RMKTLGR 9 RMK +GR Sbjct: 131 RMKNIGR 137Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.126 0.336 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 370,336 Number of extensions: 565 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |