Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 19 869 NP_004561 19 869 NP_001275703 19 869 XP_005253450 19 869 XP_006719151 19 869 NP_064502 17 2528 NP_964014 17 3301 NP_733936 16 5631 NP_001071 16 5631 NP_950245 16 5631 NP_001243057 16 5631 NP_001243056 16 5631 NP_001121683 16 5631 NP_116258 16 5631 XP_006716736 16 5631 NP_061028 16 7355 NP_775105 16 7355 NP_037423 16 7355 NP_001036148 16 7355 NP_542172 16 7355 XP_006716612 16 7355 XP_006716611 16 7355 XP_006715506 16 7355 XP_006715505 16 7355 XP_006715504 16 7355 XP_006715503 16 7355 XP_006715502 16 7355 NP_001106849 15 9605 NP_060663 15 9605 NP_848519 15 9605 NP_001164111 15 9605 NP_036251 15 9605 NP_001164110 15 9605 NP_001034892 15 9605 NP_001074025 15 9605 XP_005256532 15 9605 XP_005251917 15 9605 XP_005270863 15 9605 XP_005270862 15 9605 XP_006710667 15 9605 XP_006710666 15 9605 NP_001139108 15 9605 NP_659491 15 9605>NP_001275701 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNQYLIQVT 9 SN YLIQVT Sbjct: 1259 SNLYLIQVT 1267>NP_004561 Length = 1445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNQYLIQVT 9 SN YLIQVT Sbjct: 1218 SNLYLIQVT 1226>NP_001275703 Length = 1264 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNQYLIQVT 9 SN YLIQVT Sbjct: 1037 SNLYLIQVT 1045>XP_005253450 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNQYLIQVT 9 SN YLIQVT Sbjct: 1259 SNLYLIQVT 1267>XP_006719151 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SNQYLIQVT 9 SN YLIQVT Sbjct: 1259 SNLYLIQVT 1267>NP_064502 Length = 1176 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SNQYLIQVT 9 S+QYL++VT Sbjct: 898 SSQYLMEVT 906>NP_964014 Length = 175 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NQYLIQVT 9 NQYL Q+T Sbjct: 165 NQYLPQIT 172>NP_733936 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNQYLIQ 7 SNQ+L+Q Sbjct: 356 SNQFLVQ 362>NP_001071 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNQYLIQ 7 SNQ+L+Q Sbjct: 343 SNQFLVQ 349>NP_950245 Length = 384 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNQYLIQV 8 +NQY IQV Sbjct: 329 ANQYSIQV 336>NP_001243057 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNQYLIQV 8 +NQY IQV Sbjct: 280 ANQYSIQV 287>NP_001243056 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNQYLIQV 8 +NQY IQV Sbjct: 280 ANQYSIQV 287>NP_001121683 Length = 554 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SNQYLIQV 8 SNQYL V Sbjct: 409 SNQYLFSV 416>NP_116258 Length = 583 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SNQYLIQV 8 SNQYL V Sbjct: 438 SNQYLFSV 445>XP_006716736 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SNQYLIQV 8 SNQYL V Sbjct: 351 SNQYLFSV 358>NP_061028 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NQYLIQV 8 N YL+QV Sbjct: 266 NSYLVQV 272>NP_775105 Length = 1659 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNQYLIQV 8 SNQ+LI V Sbjct: 146 SNQFLIYV 153>NP_037423 Length = 1443 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NQYLIQVT 9 N+Y++QV+ Sbjct: 615 NRYIVQVS 622>NP_001036148 Length = 1683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNQYLIQV 8 SNQ+LI V Sbjct: 146 SNQFLIYV 153>NP_542172 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SNQYLI 6 SNQYL+ Sbjct: 272 SNQYLV 277>XP_006716612 Length = 1365 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NQYLIQVT 9 N+Y++QV+ Sbjct: 537 NRYIVQVS 544>XP_006716611 Length = 1440 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NQYLIQVT 9 N+Y++QV+ Sbjct: 615 NRYIVQVS 622>XP_006715506 Length = 1507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNQYLIQV 8 SNQ+LI V Sbjct: 146 SNQFLIYV 153>XP_006715505 Length = 1673 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNQYLIQV 8 SNQ+LI V Sbjct: 146 SNQFLIYV 153>XP_006715504 Length = 1683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNQYLIQV 8 SNQ+LI V Sbjct: 146 SNQFLIYV 153>XP_006715503 Length = 1707 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNQYLIQV 8 SNQ+LI V Sbjct: 146 SNQFLIYV 153>XP_006715502 Length = 1707 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNQYLIQV 8 SNQ+LI V Sbjct: 146 SNQFLIYV 153>NP_001106849 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QYLIQVT 9 QY+IQ+T Sbjct: 172 QYVIQLT 178>NP_060663 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QYLIQVT 9 QY+IQ+T Sbjct: 172 QYVIQLT 178>NP_848519 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NQYLIQV 8 NQY++Q+ Sbjct: 74 NQYVVQL 80>NP_001164111 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NQYLIQV 8 NQY++Q+ Sbjct: 61 NQYVVQL 67>NP_036251 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NQYLIQV 8 NQY++Q+ Sbjct: 61 NQYVVQL 67>NP_001164110 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NQYLIQV 8 NQY++Q+ Sbjct: 61 NQYVVQL 67>NP_001034892 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NQYLIQV 8 NQY++Q+ Sbjct: 61 NQYVVQL 67>NP_001074025 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NQYLIQVT 9 NQY++ V+ Sbjct: 531 NQYIVSVS 538>XP_005256532 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NQYLIQVT 9 NQY++ V+ Sbjct: 510 NQYIVSVS 517>XP_005251917 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NQYLIQV 8 NQY++Q+ Sbjct: 61 NQYVVQL 67>XP_005270863 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNQYLIQ 7 SN+YLI+ Sbjct: 92 SNRYLIE 98>XP_005270862 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNQYLIQ 7 SN+YLI+ Sbjct: 92 SNRYLIE 98>XP_006710667 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNQYLIQ 7 SN+YLI+ Sbjct: 92 SNRYLIE 98>XP_006710666 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNQYLIQ 7 SN+YLI+ Sbjct: 92 SNRYLIE 98>NP_001139108 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNQYLIQ 7 SN+YLI+ Sbjct: 92 SNRYLIE 98>NP_659491 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NQYLIQVT 9 NQY++ V+ Sbjct: 599 NQYIVSVS 606Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.125 0.316 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 435,102 Number of extensions: 663 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |