Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 665 NP_001075109 19 665 NP_008958 17 4312 XP_005247133 17 4312 NP_057006 16 5631 NP_001123237 16 5631 NP_001243779 16 5631 NP_596869 16 5631 NP_056374 16 5631 XP_006724887 16 5631 XP_006722501 16 5631 XP_005258301 16 5631 XP_005258300 16 5631 XP_006712787 16 5631 XP_006712786 16 5631 NP_001254479 16 5631 NP_055828 16 7355 NP_001009999 16 7355 NP_001185902 16 7355 NP_065939 16 7355 NP_001185901 16 7355 XP_006712581 16 7355 XP_005246132 16 7355 XP_005271131 16 7355 XP_006710854 16 7355 XP_006710537 16 7355 XP_006710536 16 7355 XP_006710535 16 7355 XP_005245843 16 7355 NP_001073973 16 7355 NP_000670 15 9605 NP_008832 15 9605 NP_004438 15 9605 NP_001018082 15 9605 NP_001017523 15 9605 NP_060382 15 9605 NP_005133 15 9605 NP_055953 15 9605 NP_665803 15 9605 NP_001158608 15 9605 XP_005254461 15 9605 XP_006720603 15 9605 XP_006720602 15 9605 XP_005268702 15 9605 XP_006719120 15 9605 XP_005253397 15 9605 XP_005253396 15 9605 XP_005273967 15 9605 XP_005265876 15 9605 XP_006714884 15 9605 XP_005265875 15 9605 XP_005263140 15 9605 XP_006711599 15 9605 XP_005245543 15 9605 XP_006711598 15 9605 XP_006711597 15 9605 XP_006711596 15 9605 XP_006711595 15 9605 XP_006711594 15 9605 NP_110391 15 9605 NP_001005168 15 9605>NP_008835 Length = 4128 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNNKELSI 8 SNNKELSI Sbjct: 354 SNNKELSI 361>NP_001075109 Length = 4097 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNNKELSI 8 SNNKELSI Sbjct: 354 SNNKELSI 361>NP_008958 Length = 1522 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NNKELSIG 9 NNKEL G Sbjct: 1495 NNKELGTG 1502>XP_005247133 Length = 1517 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NNKELSIG 9 NNKEL G Sbjct: 1490 NNKELGTG 1497>NP_057006 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SNNKEL 6 SNNKEL Sbjct: 111 SNNKEL 116>NP_001123237 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SNNKEL 6 SNNKEL Sbjct: 111 SNNKEL 116>NP_001243779 Length = 34350 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NNKELS 7 NNKELS Sbjct: 4701 NNKELS 4706>NP_596869 Length = 33423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NNKELS 7 NNKELS Sbjct: 3774 NNKELS 3779>NP_056374 Length = 1596 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNNKELSIG 9 +NNK+L +G Sbjct: 279 NNNKDLLLG 287>XP_006724887 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SNNKEL 6 SNNKEL Sbjct: 111 SNNKEL 116>XP_006722501 Length = 1403 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNNKELSIG 9 +NNK+L +G Sbjct: 279 NNNKDLLLG 287>XP_005258301 Length = 1539 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNNKELSIG 9 +NNK+L +G Sbjct: 279 NNNKDLLLG 287>XP_005258300 Length = 1596 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNNKELSIG 9 +NNK+L +G Sbjct: 279 NNNKDLLLG 287>XP_006712787 Length = 33978 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NNKELS 7 NNKELS Sbjct: 4702 NNKELS 4707>XP_006712786 Length = 35484 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NNKELS 7 NNKELS Sbjct: 4702 NNKELS 4707>NP_001254479 Length = 35991 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NNKELS 7 NNKELS Sbjct: 5018 NNKELS 5023>NP_055828 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NNKELSIG 9 NNK +S+G Sbjct: 402 NNKPVSLG 409>NP_001009999 Length = 876 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NNKELSIG 9 NNK +S+G Sbjct: 426 NNKPVSLG 433>NP_001185902 Length = 143 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NNKELSIG 9 N+K LS+G Sbjct: 26 NDKHLSVG 33>NP_065939 Length = 1094 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NNKELSIG 9 N+K LS+G Sbjct: 85 NDKHLSVG 92>NP_001185901 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NNKELSIG 9 N+K LS+G Sbjct: 26 NDKHLSVG 33>XP_006712581 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNNKELS 7 +NNKE+S Sbjct: 64 ANNKEIS 70>XP_005246132 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNNKELS 7 +NNKE+S Sbjct: 64 ANNKEIS 70>XP_005271131 Length = 376 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NNKELSIG 9 N+K LS+G Sbjct: 85 NDKHLSVG 92>XP_006710854 Length = 1046 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NNKELSIG 9 N+K LS+G Sbjct: 37 NDKHLSVG 44>XP_006710537 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NNKELSIG 9 NNK +S+G Sbjct: 422 NNKPVSLG 429>XP_006710536 Length = 828 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NNKELSIG 9 NNK +S+G Sbjct: 422 NNKPVSLG 429>XP_006710535 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NNKELSIG 9 NNK +S+G Sbjct: 402 NNKPVSLG 409>XP_005245843 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NNKELSIG 9 NNK +S+G Sbjct: 422 NNKPVSLG 429>NP_001073973 Length = 1052 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNNKELS 7 +NNKE+S Sbjct: 64 ANNKEIS 70>NP_000670 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNNKELSI 8 SN+KEL++ Sbjct: 246 SNSKELTL 253>NP_008832 Length = 2548 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NNKELSIG 9 N K LSIG Sbjct: 527 NTKTLSIG 534>NP_004438 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NNKELSI 8 NN ELS+ Sbjct: 546 NNSELSV 552>NP_001018082 Length = 1104 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NNKELS 7 NNKE+S Sbjct: 918 NNKEMS 923>NP_001017523 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NNKELS 7 NNKE+S Sbjct: 455 NNKEMS 460>NP_060382 Length = 1022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NNKELSIG 9 +NK LS+G Sbjct: 224 SNKPLSVG 231>NP_005133 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNNKELSIG 9 S+N +L+IG Sbjct: 82 SDNNDLTIG 90>NP_055953 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NNKELSI 8 N KELSI Sbjct: 473 NKKELSI 479>NP_665803 Length = 1025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NNKELS 7 NNKE+S Sbjct: 840 NNKEMS 845>NP_001158608 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NNKELSIG 9 +NK LS+G Sbjct: 224 SNKPLSVG 231>XP_005254461 Length = 2600 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NNKELSIG 9 N K LSIG Sbjct: 508 NTKTLSIG 515>XP_006720603 Length = 2619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NNKELSIG 9 N K LSIG Sbjct: 527 NTKTLSIG 534>XP_006720602 Length = 2619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NNKELSIG 9 N K LSIG Sbjct: 527 NTKTLSIG 534>XP_005268702 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NNKELS 7 NNKE+S Sbjct: 541 NNKEMS 546>XP_006719120 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NNKELSI 8 NN ELS+ Sbjct: 546 NNSELSV 552>XP_005253397 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NNKELSI 8 NN ELS+ Sbjct: 546 NNSELSV 552>XP_005253396 Length = 833 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NNKELSI 8 NN ELS+ Sbjct: 557 NNSELSV 563>XP_005273967 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNNKELSIG 9 S+N +L+IG Sbjct: 57 SDNNDLTIG 65>XP_005265876 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNNKELSI 8 SN+KEL++ Sbjct: 246 SNSKELTL 253>XP_006714884 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNNKELSI 8 SN+KEL++ Sbjct: 246 SNSKELTL 253>XP_005265875 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNNKELSI 8 SN+KEL++ Sbjct: 246 SNSKELTL 253>XP_005263140 Length = 1034 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NNKELSIG 9 +NK LS+G Sbjct: 236 SNKPLSVG 243>XP_006711599 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NNKELSI 8 +NKELS+ Sbjct: 54 DNKELSV 60>XP_005245543 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NNKELSI 8 +NKELS+ Sbjct: 54 DNKELSV 60>XP_006711598 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NNKELSI 8 +NKELS+ Sbjct: 54 DNKELSV 60>XP_006711597 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NNKELSI 8 +NKELS+ Sbjct: 54 DNKELSV 60>XP_006711596 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NNKELSI 8 +NKELS+ Sbjct: 54 DNKELSV 60>XP_006711595 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NNKELSI 8 +NKELS+ Sbjct: 54 DNKELSV 60>XP_006711594 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NNKELSI 8 +NKELS+ Sbjct: 54 DNKELSV 60>NP_110391 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NNKELSI 8 +NKELS+ Sbjct: 54 DNKELSV 60>NP_001005168 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NNKELSIG 9 N KE+S G Sbjct: 94 NTKEISFG 101Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.290 0.117 0.285 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 590,150 Number of extensions: 1029 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |