Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 19 665 NP_001035957 19 665 XP_006721991 19 665 XP_006721990 19 665 XP_006721989 19 665 XP_005258041 19 665 XP_006721988 19 665 XP_006721987 19 665 XP_006721986 19 665 XP_005258040 19 665 XP_006721985 19 665 NP_055730 17 4312 NP_001242982 17 4312 XP_006717494 17 4312 XP_006717493 17 4312 XP_006717491 17 4312 XP_006717490 17 4312 XP_006717489 17 4312 XP_006717488 17 4312 XP_006717487 17 4312 XP_006717486 17 4312 NP_001243839 16 5631 NP_004719 16 5631 XP_006719560 16 5631 XP_005269075 16 5631 NP_060458 16 5631 NP_004659 16 7355 NP_003125 16 7355 NP_001253981 16 7355 XP_005257983 16 7355 XP_006716232 16 7355 XP_006716231 16 7355 NP_775259 16 7355 NP_001028748 16 7355 NP_001243092 15 9605 NP_001243095 15 9605 NP_001157 15 9605 NP_653309 15 9605 NP_114425 15 9605 NP_003667 15 9605 XP_006711902 15 9605 NP_061720 15 9605>NP_000258 Length = 2818 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNLLNANV 8 SNLLNANV Sbjct: 1150 SNLLNANV 1157>NP_001035957 Length = 2839 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNLLNANV 8 SNLLNANV Sbjct: 1150 SNLLNANV 1157>XP_006721991 Length = 1632 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNLLNANV 8 SNLLNANV Sbjct: 1160 SNLLNANV 1167>XP_006721990 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNLLNANV 8 SNLLNANV Sbjct: 1160 SNLLNANV 1167>XP_006721989 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNLLNANV 8 SNLLNANV Sbjct: 1160 SNLLNANV 1167>XP_005258041 Length = 2836 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNLLNANV 8 SNLLNANV Sbjct: 1150 SNLLNANV 1157>XP_006721988 Length = 2846 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNLLNANV 8 SNLLNANV Sbjct: 1160 SNLLNANV 1167>XP_006721987 Length = 2849 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNLLNANV 8 SNLLNANV Sbjct: 1160 SNLLNANV 1167>XP_006721986 Length = 2854 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNLLNANV 8 SNLLNANV Sbjct: 1147 SNLLNANV 1154>XP_005258040 Length = 2857 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNLLNANV 8 SNLLNANV Sbjct: 1150 SNLLNANV 1157>XP_006721985 Length = 2867 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SNLLNANV 8 SNLLNANV Sbjct: 1160 SNLLNANV 1167>NP_055730 Length = 1710 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLNANV 8 NLLNAN+ Sbjct: 1318 NLLNANL 1324>NP_001242982 Length = 1709 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLNANV 8 NLLNAN+ Sbjct: 1317 NLLNANL 1323>XP_006717494 Length = 1571 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLNANV 8 NLLNAN+ Sbjct: 1179 NLLNANL 1185>XP_006717493 Length = 1610 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLNANV 8 NLLNAN+ Sbjct: 1218 NLLNANL 1224>XP_006717491 Length = 1677 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLNANV 8 NLLNAN+ Sbjct: 1285 NLLNANL 1291>XP_006717490 Length = 1791 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLNANV 8 NLLNAN+ Sbjct: 1399 NLLNANL 1405>XP_006717489 Length = 1945 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLNANV 8 NLLNAN+ Sbjct: 1680 NLLNANL 1686>XP_006717488 Length = 2031 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLNANV 8 NLLNAN+ Sbjct: 1680 NLLNANL 1686>XP_006717487 Length = 2071 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLNANV 8 NLLNAN+ Sbjct: 1679 NLLNANL 1685>XP_006717486 Length = 2072 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLNANV 8 NLLNAN+ Sbjct: 1680 NLLNANL 1686>NP_001243839 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLLNANVG 9 +L+N+NVG Sbjct: 560 SLINSNVG 567>NP_004719 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLLNANVG 9 +L+N+NVG Sbjct: 628 SLINSNVG 635>XP_006719560 Length = 826 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SNLLNANVG 9 +N LNAN+G Sbjct: 667 TNGLNANMG 675>XP_005269075 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SNLLNANVG 9 +N LNAN+G Sbjct: 770 TNGLNANMG 778>NP_060458 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SNLLNANVG 9 +N LNAN+G Sbjct: 770 TNGLNANMG 778>NP_004659 Length = 1857 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NLLNANVG 9 NL+N N G Sbjct: 143 NLVNTNAG 150>NP_003125 Length = 136 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNLLNANV 8 SNLL AN+ Sbjct: 84 SNLLRANM 91>NP_001253981 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NLLNANV 8 NLLN NV Sbjct: 301 NLLNKNV 307>XP_005257983 Length = 850 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NLLNANV 8 NLLN NV Sbjct: 301 NLLNKNV 307>XP_006716232 Length = 2753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NLLNANVG 9 NL+N N G Sbjct: 143 NLVNTNAG 150>XP_006716231 Length = 2753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NLLNANVG 9 NL+N N G Sbjct: 143 NLVNTNAG 150>NP_775259 Length = 931 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NLLNANV 8 NLLN NV Sbjct: 301 NLLNKNV 307>NP_001028748 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NLLNANV 8 NLLN NV Sbjct: 301 NLLNKNV 307>NP_001243092 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NLLNANV 8 NLL ANV Sbjct: 481 NLLKANV 487>NP_001243095 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NLLNANV 8 NLL ANV Sbjct: 432 NLLKANV 438>NP_001157 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NLLNANV 8 NLL ANV Sbjct: 481 NLLKANV 487>NP_653309 Length = 1434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NLLNANV 8 NLLN N+ Sbjct: 830 NLLNLNI 836>NP_114425 Length = 130 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SNLLNANVG 9 SN+L A+VG Sbjct: 75 SNILLASVG 83>NP_003667 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NLLNANVG 9 NLL NVG Sbjct: 250 NLLTFNVG 257>XP_006711902 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NLLNANVG 9 NLL NVG Sbjct: 250 NLLTFNVG 257>NP_061720 Length = 4024 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SNLLNA 6 SNLLNA Sbjct: 2413 SNLLNA 2418Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.124 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 391,198 Number of extensions: 656 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |