Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001020949 17 4312 NP_057524 17 4312 XP_006723301 17 4312 XP_005259029 17 4312 XP_006723300 17 4312 XP_005259028 17 4312 NP_002273 16 5631 NP_002272 16 5631 NP_003557 16 5631 NP_002275 16 5631 XP_006719694 16 5631 XP_005268923 16 5631 XP_005268921 16 5631 XP_005275778 16 5631 NP_001245210 16 7355 NP_000242 16 7355 NP_001272369 16 7355 NP_689969 16 7355 NP_001272368 16 7355 NP_061874 16 7355 NP_001269786 16 7355 NP_056053 16 7355 NP_056039 16 7355 NP_001106207 16 7355 NP_001155134 16 7355 NP_001155133 16 7355 XP_006714899 16 7355 XP_005265910 16 7355 XP_006714898 16 7355 XP_005265909 16 7355 XP_005265908 16 7355 XP_005265907 16 7355 XP_005248335 16 7355 XP_006714526 16 7355 XP_006713736 16 7355 XP_005247601 16 7355 XP_006713735 16 7355 XP_006713734 16 7355 XP_006713141 16 7355 XP_006713140 16 7355 XP_005265056 16 7355 XP_005264389 16 7355 NP_068798 15 9605 NP_001129477 15 9605 NP_001129478 15 9605 NP_000810 15 9605 XP_006724053 15 9605 XP_006724052 15 9605 XP_005260998 15 9605 XP_006724051 15 9605>NP_001020949 Length = 424 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 +NLEAL+Q Sbjct: 401 NNLEALLQ 408>NP_057524 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 +NLEAL+Q Sbjct: 451 NNLEALLQ 458>XP_006723301 Length = 424 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 +NLEAL+Q Sbjct: 401 NNLEALLQ 408>XP_005259029 Length = 424 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 +NLEAL+Q Sbjct: 401 NNLEALLQ 408>XP_006723300 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 +NLEAL+Q Sbjct: 451 NNLEALLQ 458>XP_005259028 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 +NLEAL+Q Sbjct: 451 NNLEALLQ 458>NP_002273 Length = 493 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 +N+EALIQ Sbjct: 232 ANVEALIQ 239>NP_002272 Length = 505 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 +N+EALIQ Sbjct: 227 ANVEALIQ 234>NP_003557 Length = 1411 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLEALIQ 8 NLEAL+Q Sbjct: 527 NLEALLQ 533>NP_002275 Length = 486 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 +N+EALIQ Sbjct: 227 ANVEALIQ 234>XP_006719694 Length = 1465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLEALIQ 8 NLEAL+Q Sbjct: 581 NLEALLQ 587>XP_005268923 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 +N+EALIQ Sbjct: 304 ANVEALIQ 311>XP_005268921 Length = 447 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 +N+EALIQ Sbjct: 232 ANVEALIQ 239>XP_005275778 Length = 447 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 +N+EALIQ Sbjct: 232 ANVEALIQ 239>NP_001245210 Length = 868 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SNLEALI 7 SNLEAL+ Sbjct: 119 SNLEALL 125>NP_000242 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SNLEALI 7 SNLEAL+ Sbjct: 185 SNLEALL 191>NP_001272369 Length = 1385 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SNLEALIQI 9 +NL ALIQ+ Sbjct: 497 ANLHALIQM 505>NP_689969 Length = 1708 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SNLEALIQI 9 +NL ALIQ+ Sbjct: 782 ANLHALIQM 790>NP_001272368 Length = 1732 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SNLEALIQI 9 +NL ALIQ+ Sbjct: 782 ANLHALIQM 790>NP_061874 Length = 1706 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLEALIQ 8 NL+ALIQ Sbjct: 896 NLDALIQ 902>NP_001269786 Length = 1694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLEALIQ 8 NL+ALIQ Sbjct: 896 NLDALIQ 902>NP_056053 Length = 1113 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNLEALIQ 8 SNL AL+Q Sbjct: 683 SNLSALLQ 690>NP_056039 Length = 1233 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 SN+E+L+Q Sbjct: 46 SNMESLLQ 53>NP_001106207 Length = 1512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 SN+E+L+Q Sbjct: 442 SNMESLLQ 449>NP_001155134 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNLEALIQ 8 SNL AL+Q Sbjct: 683 SNLSALLQ 690>NP_001155133 Length = 1119 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNLEALIQ 8 SNL AL+Q Sbjct: 683 SNLSALLQ 690>XP_006714899 Length = 881 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNLEALIQ 8 SNL AL+Q Sbjct: 440 SNLSALLQ 447>XP_005265910 Length = 1112 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNLEALIQ 8 SNL AL+Q Sbjct: 683 SNLSALLQ 690>XP_006714898 Length = 1117 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNLEALIQ 8 SNL AL+Q Sbjct: 683 SNLSALLQ 690>XP_005265909 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNLEALIQ 8 SNL AL+Q Sbjct: 683 SNLSALLQ 690>XP_005265908 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNLEALIQ 8 SNL AL+Q Sbjct: 683 SNLSALLQ 690>XP_005265907 Length = 1124 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SNLEALIQ 8 SNL AL+Q Sbjct: 683 SNLSALLQ 690>XP_005248335 Length = 1423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SNLEALIQI 9 +NL ALIQ+ Sbjct: 497 ANLHALIQM 505>XP_006714526 Length = 1670 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SNLEALIQI 9 +NL ALIQ+ Sbjct: 782 ANLHALIQM 790>XP_006713736 Length = 928 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLEALIQ 8 NL+ALIQ Sbjct: 896 NLDALIQ 902>XP_005247601 Length = 1484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLEALIQ 8 NL+ALIQ Sbjct: 686 NLDALIQ 692>XP_006713735 Length = 1656 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLEALIQ 8 NL+ALIQ Sbjct: 896 NLDALIQ 902>XP_006713734 Length = 1693 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLEALIQ 8 NL+ALIQ Sbjct: 896 NLDALIQ 902>XP_006713141 Length = 1274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 SN+E+L+Q Sbjct: 46 SNMESLLQ 53>XP_006713140 Length = 1629 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 SN+E+L+Q Sbjct: 442 SNMESLLQ 449>XP_005265056 Length = 1670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SNLEALIQ 8 SN+E+L+Q Sbjct: 442 SNMESLLQ 449>XP_005264389 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SNLEALI 7 SNLEAL+ Sbjct: 185 SNLEALL 191>NP_068798 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NLEALIQ 8 NLEAL++ Sbjct: 450 NLEALVE 456>NP_001129477 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SNLEALI 7 SNL+ALI Sbjct: 819 SNLQALI 825>NP_001129478 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SNLEALI 7 SNL+ALI Sbjct: 819 SNLQALI 825>NP_000810 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SNLEALI 7 SNL+ALI Sbjct: 819 SNLQALI 825>XP_006724053 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SNLEALI 7 SNL+ALI Sbjct: 819 SNLQALI 825>XP_006724052 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SNLEALI 7 SNL+ALI Sbjct: 819 SNLQALI 825>XP_005260998 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SNLEALI 7 SNL+ALI Sbjct: 819 SNLQALI 825>XP_006724051 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SNLEALI 7 SNL+ALI Sbjct: 835 SNLQALI 841Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.133 0.303 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 326,558 Number of extensions: 621 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |