Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 20 509 NP_001185763 20 509 NP_055459 20 509 NP_001002811 20 509 NP_001002812 20 509 XP_006726410 20 509 XP_006711719 20 509 XP_006711717 20 509 XP_006711716 20 509 XP_006711715 20 509 XP_006711714 20 509 XP_006711713 20 509 XP_006711712 20 509 XP_006711711 20 509 XP_006711710 20 509 XP_006711709 20 509 XP_005277503 20 509 XP_005273038 20 509 XP_006711708 20 509 XP_005277500 20 509 XP_006711707 20 509 XP_005277499 20 509 XP_006711706 20 509 XP_006711705 20 509 XP_006711164 20 509 NP_003213 17 4312 NP_000258 16 7355 NP_001035957 16 7355 NP_775871 16 7355 XP_006721990 16 7355 XP_006721989 16 7355 XP_005258041 16 7355 XP_006721988 16 7355 XP_006721987 16 7355 XP_006721986 16 7355 XP_005258040 16 7355 XP_006721985 16 7355 NP_001006658 15 9605 NP_065830 15 9605 NP_115850 15 9605 NP_001036783 15 9605 NP_919254 15 9605 XP_005255923 15 9605 XP_005268263 15 9605 XP_005268262 15 9605 XP_005268261 15 9605 NP_056066 15 9605>NP_001185761 Length = 2240 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 529 SDKTLEANE 537>NP_001185763 Length = 2362 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 463 SDKTLEANE 471>NP_055459 Length = 2346 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 463 SDKTLEANE 471>NP_001002811 Length = 1132 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 626 SDKTLEANE 634>NP_001002812 Length = 969 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 463 SDKTLEANE 471>XP_006726410 Length = 2087 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 538 SDKTLEANE 546>XP_006711719 Length = 2302 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 529 SDKTLEANE 537>XP_006711717 Length = 2385 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 529 SDKTLEANE 537>XP_006711716 Length = 2411 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 529 SDKTLEANE 537>XP_006711715 Length = 2428 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 463 SDKTLEANE 471>XP_006711714 Length = 2429 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 463 SDKTLEANE 471>XP_006711713 Length = 2432 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 466 SDKTLEANE 474>XP_006711712 Length = 2473 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 626 SDKTLEANE 634>XP_006711711 Length = 2482 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 626 SDKTLEANE 634>XP_006711710 Length = 2494 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 529 SDKTLEANE 537>XP_006711709 Length = 2495 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 529 SDKTLEANE 537>XP_005277503 Length = 2498 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 626 SDKTLEANE 634>XP_005273038 Length = 2509 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 626 SDKTLEANE 634>XP_006711708 Length = 2512 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 626 SDKTLEANE 634>XP_005277500 Length = 2525 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 626 SDKTLEANE 634>XP_006711707 Length = 2553 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 626 SDKTLEANE 634>XP_005277499 Length = 2561 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 626 SDKTLEANE 634>XP_006711706 Length = 2591 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 626 SDKTLEANE 634>XP_006711705 Length = 2592 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 626 SDKTLEANE 634>XP_006711164 Length = 2087 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SNKTLEANE 9 S+KTLEANE Sbjct: 538 SDKTLEANE 546>NP_003213 Length = 450 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SNKTLEANE 9 SNKTLE E Sbjct: 438 SNKTLEKME 446>NP_000258 Length = 2818 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NKTLEANE 9 +KTL ANE Sbjct: 1891 SKTLAANE 1898>NP_001035957 Length = 2839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NKTLEANE 9 +KTL ANE Sbjct: 1912 SKTLAANE 1919>NP_775871 Length = 8384 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNKTLEANE 9 S+KT+E N+ Sbjct: 284 SSKTVEGNQ 292>XP_006721990 Length = 2823 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NKTLEANE 9 +KTL ANE Sbjct: 1922 SKTLAANE 1929>XP_006721989 Length = 2823 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NKTLEANE 9 +KTL ANE Sbjct: 1922 SKTLAANE 1929>XP_005258041 Length = 2836 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NKTLEANE 9 +KTL ANE Sbjct: 1891 SKTLAANE 1898>XP_006721988 Length = 2846 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NKTLEANE 9 +KTL ANE Sbjct: 1901 SKTLAANE 1908>XP_006721987 Length = 2849 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NKTLEANE 9 +KTL ANE Sbjct: 1922 SKTLAANE 1929>XP_006721986 Length = 2854 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NKTLEANE 9 +KTL ANE Sbjct: 1909 SKTLAANE 1916>XP_005258040 Length = 2857 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NKTLEANE 9 +KTL ANE Sbjct: 1912 SKTLAANE 1919>XP_006721985 Length = 2867 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NKTLEANE 9 +KTL ANE Sbjct: 1922 SKTLAANE 1929>NP_001006658 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NKTLEANE 9 NKTL+A E Sbjct: 928 NKTLDAIE 935>NP_065830 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NKTLEANE 9 NKTL+A E Sbjct: 917 NKTLDAIE 924>NP_115850 Length = 103 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SNKTLEANE 9 SN+ EANE Sbjct: 18 SNEANEANE 26>NP_001036783 Length = 1045 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNKTLEANE 9 + +TL+ANE Sbjct: 970 ATQTLQANE 978>NP_919254 Length = 1045 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNKTLEANE 9 + +TL+ANE Sbjct: 970 ATQTLQANE 978>XP_005255923 Length = 667 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNKTLEA 7 SNKT+E+ Sbjct: 84 SNKTIES 90>XP_005268263 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNKTLEANE 9 + +TL+ANE Sbjct: 970 ATQTLQANE 978>XP_005268262 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNKTLEANE 9 + +TL+ANE Sbjct: 970 ATQTLQANE 978>XP_005268261 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SNKTLEANE 9 + +TL+ANE Sbjct: 970 ATQTLQANE 978>NP_056066 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNKTLEA 7 SNKT+E+ Sbjct: 240 SNKTIES 246Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.276 0.0988 0.224 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 395,033 Number of extensions: 638 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |