Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 21 175 NP_036462 21 175 NP_001243397 21 175 XP_005269721 21 175 NP_073150 20 509 NP_001092882 17 3301 NP_006757 17 3301 NP_001092883 17 3301 XP_005273706 17 3301 NP_942133 17 4312 NP_942131 17 4312 NP_942134 17 4312 NP_942135 17 4312 NP_942136 17 4312 XP_006725385 17 4312 XP_006725384 17 4312 XP_006725383 17 4312 XP_005257325 17 4312 XP_005257324 17 4312 XP_005257323 17 4312 XP_006721916 17 4312 NP_055692 16 5631 XP_005257947 16 5631 XP_005257946 16 5631 XP_005257945 16 5631 XP_006722277 16 5631 NP_001277182 16 7355 NP_001005463 16 7355 NP_001010986 16 7355 NP_775965 16 7355 XP_006724816 16 7355 XP_006724815 16 7355 XP_006724814 16 7355 XP_005262462 16 7355 XP_006717806 16 7355 XP_005252726 16 7355 XP_006717805 16 7355 XP_006717804 16 7355 XP_005252725 16 7355 XP_005252724 16 7355 XP_006717803 16 7355 XP_006717802 16 7355 NP_000123 15 9605 NP_079291 15 9605 XP_006717810 15 9605 XP_006717809 15 9605 XP_005269730 15 9605 XP_005269729 15 9605>NP_001243398 Length = 1781 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NAMNGYSM 9 NAMNGYSM Sbjct: 1698 NAMNGYSM 1705>NP_036462 Length = 2073 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NAMNGYSM 9 NAMNGYSM Sbjct: 1990 NAMNGYSM 1997>NP_001243397 Length = 1890 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NAMNGYSM 9 NAMNGYSM Sbjct: 1807 NAMNGYSM 1814>XP_005269721 Length = 2073 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NAMNGYSM 9 NAMNGYSM Sbjct: 1990 NAMNGYSM 1997>NP_073150 Length = 575 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SNAMNGYS 8 SN+MNGYS Sbjct: 476 SNSMNGYS 483>NP_001092882 Length = 2004 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 NAMN Y M Sbjct: 1920 NAMNSYRM 1927>NP_006757 Length = 2004 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 NAMN Y M Sbjct: 1920 NAMNSYRM 1927>NP_001092883 Length = 2004 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 NAMN Y M Sbjct: 1920 NAMNSYRM 1927>XP_005273706 Length = 1997 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 NAMN Y M Sbjct: 1913 NAMNSYRM 1920>NP_942133 Length = 2346 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 N MNGY + Sbjct: 862 NVMNGYCL 869>NP_942131 Length = 2383 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 N MNGY + Sbjct: 899 NVMNGYCL 906>NP_942134 Length = 2288 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 N MNGY + Sbjct: 804 NVMNGYCL 811>NP_942135 Length = 2268 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 N MNGY + Sbjct: 784 NVMNGYCL 791>NP_942136 Length = 2346 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 N MNGY + Sbjct: 862 NVMNGYCL 869>XP_006725385 Length = 2038 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 N MNGY + Sbjct: 554 NVMNGYCL 561>XP_006725384 Length = 2268 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 N MNGY + Sbjct: 784 NVMNGYCL 791>XP_006725383 Length = 2338 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 N MNGY + Sbjct: 862 NVMNGYCL 869>XP_005257325 Length = 2038 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 N MNGY + Sbjct: 554 NVMNGYCL 561>XP_005257324 Length = 2268 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 N MNGY + Sbjct: 784 NVMNGYCL 791>XP_005257323 Length = 2268 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 N MNGY + Sbjct: 784 NVMNGYCL 791>XP_006721916 Length = 2375 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NAMNGYSM 9 N MNGY + Sbjct: 899 NVMNGYCL 906>NP_055692 Length = 1942 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNAMNGY 7 SNA++GY Sbjct: 147 SNALSGY 153>XP_005257947 Length = 1935 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNAMNGY 7 SNA++GY Sbjct: 147 SNALSGY 153>XP_005257946 Length = 1943 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNAMNGY 7 SNA++GY Sbjct: 147 SNALSGY 153>XP_005257945 Length = 1969 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNAMNGY 7 SNA++GY Sbjct: 147 SNALSGY 153>XP_006722277 Length = 1970 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SNAMNGY 7 SNA++GY Sbjct: 147 SNALSGY 153>NP_001277182 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAMNGYS 8 +A+NGYS Sbjct: 262 SAVNGYS 268>NP_001005463 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SNAMNGY 7 S +MNGY Sbjct: 478 STSMNGY 484>NP_001010986 Length = 1119 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NAMNGY 7 NAM+GY Sbjct: 591 NAMDGY 596>NP_775965 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NAMNGY 7 NAM+GY Sbjct: 591 NAMDGY 596>XP_006724816 Length = 1105 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NAMNGY 7 NAM+GY Sbjct: 588 NAMDGY 593>XP_006724815 Length = 1105 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NAMNGY 7 NAM+GY Sbjct: 588 NAMDGY 593>XP_006724814 Length = 1116 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NAMNGY 7 NAM+GY Sbjct: 588 NAMDGY 593>XP_005262462 Length = 1129 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NAMNGY 7 NAM+GY Sbjct: 588 NAMDGY 593>XP_006717806 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SNAMNGY 7 S +MNGY Sbjct: 487 STSMNGY 493>XP_005252726 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SNAMNGY 7 S +MNGY Sbjct: 478 STSMNGY 484>XP_006717805 Length = 593 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SNAMNGY 7 S +MNGY Sbjct: 487 STSMNGY 493>XP_006717804 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SNAMNGY 7 S +MNGY Sbjct: 487 STSMNGY 493>XP_005252725 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SNAMNGY 7 S +MNGY Sbjct: 487 STSMNGY 493>XP_005252724 Length = 620 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SNAMNGY 7 S +MNGY Sbjct: 478 STSMNGY 484>XP_006717803 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SNAMNGY 7 S +MNGY Sbjct: 487 STSMNGY 493>XP_006717802 Length = 629 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SNAMNGY 7 S +MNGY Sbjct: 487 STSMNGY 493>NP_000123 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NAMNGYSM 9 +A+NGY M Sbjct: 1938 HAINGYIM 1945>NP_079291 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AMNGYS 8 A+NGYS Sbjct: 262 AVNGYS 267>XP_006717810 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AMNGYS 8 A+NGYS Sbjct: 278 AVNGYS 283>XP_006717809 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AMNGYS 8 A+NGYS Sbjct: 278 AVNGYS 283>XP_005269730 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AMNGYS 8 A+NGYS Sbjct: 278 AVNGYS 283>XP_005269729 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AMNGYS 8 A+NGYS Sbjct: 279 AVNGYS 284Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.111 0.299 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 504,172 Number of extensions: 701 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |