Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 390 NP_001075109 20 390 NP_659457 17 4312 NP_060142 16 5631 NP_001276915 16 5631 NP_060328 16 5631 NP_001127911 16 5631 NP_001127910 16 5631 NP_665696 16 5631 NP_001258652 16 5631 NP_110420 16 5631 XP_006720657 16 5631 XP_005254579 16 5631 XP_005254578 16 5631 XP_006720656 16 5631 XP_006720645 16 5631 XP_005254546 16 5631 XP_005254545 16 5631 XP_005254544 16 5631 XP_005254543 16 5631 XP_006714860 16 5631 XP_006714859 16 5631 XP_005268570 16 5631 NP_001127909 16 5631 NP_000324 16 7355 NP_878918 16 7355 NP_055995 16 7355 NP_001263629 16 7355 NP_612202 16 7355 NP_001170858 16 7355 NP_061895 16 7355 XP_005266770 16 7355 XP_005266768 16 7355 XP_006720147 16 7355 XP_005267517 16 7355 XP_005267516 16 7355 XP_005267515 16 7355 XP_005267514 16 7355 XP_005267513 16 7355 XP_005267512 16 7355 XP_005267511 16 7355 NP_055661 15 9605 NP_001170946 15 9605 NP_742024 15 9605 NP_689794 15 9605 NP_689895 15 9605 NP_055335 15 9605 NP_001099008 15 9605 NP_001072982 15 9605 NP_079247 15 9605 NP_001007472 15 9605 NP_066003 15 9605 NP_996830 15 9605 NP_996829 15 9605 NP_996828 15 9605 NP_996827 15 9605 NP_001275585 15 9605 NP_005289 15 9605 NP_115937 15 9605 XP_006724530 15 9605 XP_005274508 15 9605 XP_005256470 15 9605 XP_005255340 15 9605 XP_005255337 15 9605 XP_005255336 15 9605 XP_005255335 15 9605 XP_005255334 15 9605 XP_005252275 15 9605 XP_006714195 15 9605 XP_006713835 15 9605 XP_006713834 15 9605 XP_006713833 15 9605 XP_006713832 15 9605 XP_006713831 15 9605 NP_060850 15 9605>NP_008835 Length = 4128 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 MLDQSFRE Sbjct: 1600 MLDQSFRE 1607>NP_001075109 Length = 4097 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 MLDQSFRE Sbjct: 1600 MLDQSFRE 1607>NP_659457 Length = 514 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 LDQ FRE Sbjct: 153 LDQQFRE 159>NP_060142 Length = 1865 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 +L+QSFR+ Sbjct: 693 LLEQSFRQ 700>NP_001276915 Length = 200 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SMLDQSFR 8 ++LDQSF+ Sbjct: 176 TLLDQSFK 183>NP_060328 Length = 301 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SMLDQSFR 8 ++LDQSF+ Sbjct: 277 TLLDQSFK 284>NP_001127911 Length = 1253 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQSFRE 9 +D+SFRE Sbjct: 615 MDESFRE 621>NP_001127910 Length = 1253 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQSFRE 9 +D+SFRE Sbjct: 615 MDESFRE 621>NP_665696 Length = 1210 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQSFRE 9 +D+SFRE Sbjct: 615 MDESFRE 621>NP_001258652 Length = 943 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 LDQ FRE Sbjct: 460 LDQMFRE 466>NP_110420 Length = 1113 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 LDQ FRE Sbjct: 460 LDQMFRE 466>XP_006720657 Length = 301 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SMLDQSFR 8 ++LDQSF+ Sbjct: 277 TLLDQSFK 284>XP_005254579 Length = 301 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SMLDQSFR 8 ++LDQSF+ Sbjct: 277 TLLDQSFK 284>XP_005254578 Length = 301 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SMLDQSFR 8 ++LDQSF+ Sbjct: 277 TLLDQSFK 284>XP_006720656 Length = 301 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SMLDQSFR 8 ++LDQSF+ Sbjct: 277 TLLDQSFK 284>XP_006720645 Length = 1060 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 +L+QSFR+ Sbjct: 693 LLEQSFRQ 700>XP_005254546 Length = 1443 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 +L+QSFR+ Sbjct: 251 LLEQSFRQ 258>XP_005254545 Length = 1864 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 +L+QSFR+ Sbjct: 693 LLEQSFRQ 700>XP_005254544 Length = 1884 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 +L+QSFR+ Sbjct: 693 LLEQSFRQ 700>XP_005254543 Length = 1885 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 +L+QSFR+ Sbjct: 693 LLEQSFRQ 700>XP_006714860 Length = 1146 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 LDQ FRE Sbjct: 460 LDQMFRE 466>XP_006714859 Length = 1188 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 LDQ FRE Sbjct: 460 LDQMFRE 466>XP_005268570 Length = 1188 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 LDQ FRE Sbjct: 460 LDQMFRE 466>NP_001127909 Length = 1237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQSFRE 9 +D+SFRE Sbjct: 642 MDESFRE 648>NP_000324 Length = 892 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQSFRE 9 LD+SF+E Sbjct: 112 LDESFKE 118>NP_878918 Length = 6907 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLDQSFRE 9 MLD SF++ Sbjct: 1383 MLDMSFKD 1390>NP_055995 Length = 6885 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLDQSFRE 9 MLD SF++ Sbjct: 1383 MLDMSFKD 1390>NP_001263629 Length = 891 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQSFRE 9 +DQSF+E Sbjct: 498 IDQSFQE 504>NP_612202 Length = 892 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQSFRE 9 +DQSF+E Sbjct: 498 IDQSFQE 504>NP_001170858 Length = 945 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQSFRE 9 LD+SF+E Sbjct: 112 LDESFKE 118>NP_061895 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQSFRE 9 LD+SF+E Sbjct: 31 LDESFKE 37>XP_005266770 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQSFRE 9 LD+SF+E Sbjct: 100 LDESFKE 106>XP_005266768 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQSFRE 9 LD+SF+E Sbjct: 100 LDESFKE 106>XP_006720147 Length = 4788 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLDQSFRE 9 MLD SF++ Sbjct: 1383 MLDMSFKD 1390>XP_005267517 Length = 6883 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLDQSFRE 9 MLD SF++ Sbjct: 1383 MLDMSFKD 1390>XP_005267516 Length = 6884 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLDQSFRE 9 MLD SF++ Sbjct: 1383 MLDMSFKD 1390>XP_005267515 Length = 6899 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLDQSFRE 9 MLD SF++ Sbjct: 1383 MLDMSFKD 1390>XP_005267514 Length = 6908 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLDQSFRE 9 MLD SF++ Sbjct: 1383 MLDMSFKD 1390>XP_005267513 Length = 6921 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLDQSFRE 9 MLD SF++ Sbjct: 1383 MLDMSFKD 1390>XP_005267512 Length = 6922 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLDQSFRE 9 MLD SF++ Sbjct: 1383 MLDMSFKD 1390>XP_005267511 Length = 6922 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MLDQSFRE 9 MLD SF++ Sbjct: 1383 MLDMSFKD 1390>NP_055661 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 LD+ FRE Sbjct: 80 LDEEFRE 86>NP_001170946 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MLDQSFR 8 MLD+SF+ Sbjct: 1 MLDESFQ 7>NP_742024 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SMLDQSFRE 9 ++LD FRE Sbjct: 299 ALLDDHFRE 307>NP_689794 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MLDQSFR 8 MLD+SF+ Sbjct: 64 MLDESFQ 70>NP_689895 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DQSFRE 9 D+SFRE Sbjct: 21 DESFRE 26>NP_055335 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 +DQ FRE Sbjct: 752 VDQGFRE 758>NP_001099008 Length = 1332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 +DQ FRE Sbjct: 752 VDQGFRE 758>NP_001072982 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 LDQ FR+ Sbjct: 343 LDQEFRQ 349>NP_079247 Length = 1566 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 +LDQS+++ Sbjct: 566 LLDQSYKQ 573>NP_001007472 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 +LDQS+++ Sbjct: 707 LLDQSYKQ 714>NP_066003 Length = 1554 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 +LDQS+++ Sbjct: 554 LLDQSYKQ 561>NP_996830 Length = 1569 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 +LDQS+++ Sbjct: 569 LLDQSYKQ 576>NP_996829 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 +LDQS+++ Sbjct: 579 LLDQSYKQ 586>NP_996828 Length = 1556 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 +LDQS+++ Sbjct: 556 LLDQSYKQ 563>NP_996827 Length = 1544 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 +LDQS+++ Sbjct: 544 LLDQSYKQ 551>NP_001275585 Length = 1104 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 LDQ FR+ Sbjct: 343 LDQEFRQ 349>NP_005289 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MLDQSFR 8 +LD+SFR Sbjct: 309 LLDRSFR 315>NP_115937 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SMLDQSFRE 9 ++LD FRE Sbjct: 157 ALLDDHFRE 165>XP_006724530 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MLDQSFR 8 MLD+SF+ Sbjct: 64 MLDESFQ 70>XP_005274508 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MLDQSFR 8 MLD+SF+ Sbjct: 64 MLDESFQ 70>XP_005256470 Length = 1120 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 +DQ FRE Sbjct: 752 VDQGFRE 758>XP_005255340 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 LDQ FR+ Sbjct: 343 LDQEFRQ 349>XP_005255337 Length = 1104 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 LDQ FR+ Sbjct: 343 LDQEFRQ 349>XP_005255336 Length = 1112 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 LDQ FR+ Sbjct: 343 LDQEFRQ 349>XP_005255335 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 LDQ FR+ Sbjct: 343 LDQEFRQ 349>XP_005255334 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LDQSFRE 9 LDQ FR+ Sbjct: 343 LDQEFRQ 349>XP_005252275 Length = 1734 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MLDQSFRE 9 +LDQS+++ Sbjct: 734 LLDQSYKQ 741>XP_006714195 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DQSFRE 9 D+SFRE Sbjct: 21 DESFRE 26>XP_006713835 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SMLDQSFRE 9 ++LD FRE Sbjct: 157 ALLDDHFRE 165>XP_006713834 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SMLDQSFRE 9 ++LD FRE Sbjct: 279 ALLDDHFRE 287>XP_006713833 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SMLDQSFRE 9 ++LD FRE Sbjct: 291 ALLDDHFRE 299>XP_006713832 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SMLDQSFRE 9 ++LD FRE Sbjct: 301 ALLDDHFRE 309>XP_006713831 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SMLDQSFRE 9 ++LD FRE Sbjct: 330 ALLDDHFRE 338>NP_060850 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMLDQSFRE 9 ++LD+SF E Sbjct: 290 TLLDESFLE 298Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.127 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 460,723 Number of extensions: 648 Number of successful extensions: 75 Number of sequences better than 10000.0: 75 Number of HSP's gapped: 75 Number of HSP's successfully gapped: 75 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |