Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 21 229 NP_858045 21 229 NP_006525 21 229 NP_001167559 21 229 NP_573439 17 4312 NP_573438 17 4312 NP_001181930 17 4312 NP_005695 17 4312 XP_006710336 17 4312 XP_006710335 17 4312 XP_006710334 17 4312 XP_006710333 17 4312 XP_006710332 17 4312 NP_689548 16 7355 NP_001268369 16 7355 NP_068759 16 7355 NP_001229852 16 7355 NP_057175 16 7355 NP_001037770 16 7355 XP_005261682 16 7355 XP_006724323 16 7355 XP_005254217 16 7355 NP_055950 15 9605 NP_001138295 15 9605 NP_005839 15 9605 NP_055797 15 9605 NP_060063 15 9605 NP_942595 15 9605 XP_005254179 15 9605 XP_005254178 15 9605 XP_006720435 15 9605 XP_005254177 15 9605 XP_006720434 15 9605 XP_005254176 15 9605 XP_005267486 15 9605 XP_006720145 15 9605 XP_005267485 15 9605 XP_005267483 15 9605 XP_005267482 15 9605 XP_005267481 15 9605 XP_005267480 15 9605 XP_005267479 15 9605 XP_005267478 15 9605 XP_005267477 15 9605 XP_005250292 15 9605 XP_005263174 15 9605 NP_001116437 15 9605>NP_001167558 Length = 1423 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SMINQMNQQ 9 SM+NQMNQQ Sbjct: 1137 SMMNQMNQQ 1145>NP_858045 Length = 1424 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SMINQMNQQ 9 SM+NQMNQQ Sbjct: 1137 SMMNQMNQQ 1145>NP_006525 Length = 1420 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SMINQMNQQ 9 SM+NQMNQQ Sbjct: 1137 SMMNQMNQQ 1145>NP_001167559 Length = 1415 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SMINQMNQQ 9 SM+NQMNQQ Sbjct: 1132 SMMNQMNQQ 1140>NP_573439 Length = 1436 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MINQMNQ 8 M+NQ+NQ Sbjct: 1265 MLNQLNQ 1271>NP_573438 Length = 1440 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MINQMNQ 8 M+NQ+NQ Sbjct: 1271 MLNQLNQ 1277>NP_001181930 Length = 1433 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MINQMNQ 8 M+NQ+NQ Sbjct: 1262 MLNQLNQ 1268>NP_005695 Length = 1446 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MINQMNQ 8 M+NQ+NQ Sbjct: 1275 MLNQLNQ 1281>XP_006710336 Length = 1177 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MINQMNQ 8 M+NQ+NQ Sbjct: 1006 MLNQLNQ 1012>XP_006710335 Length = 1370 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MINQMNQ 8 M+NQ+NQ Sbjct: 1199 MLNQLNQ 1205>XP_006710334 Length = 1292 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MINQMNQ 8 M+NQ+NQ Sbjct: 1121 MLNQLNQ 1127>XP_006710333 Length = 1439 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MINQMNQ 8 M+NQ+NQ Sbjct: 1268 MLNQLNQ 1274>XP_006710332 Length = 1442 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MINQMNQ 8 M+NQ+NQ Sbjct: 1271 MLNQLNQ 1277>NP_689548 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SMINQMNQQ 9 S+ NQ NQ+ Sbjct: 483 SLFNQKNQE 491>NP_001268369 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 INQMNQQ 9 ++QMNQQ Sbjct: 411 LSQMNQQ 417>NP_068759 Length = 440 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 INQMNQQ 9 ++QMNQQ Sbjct: 394 LSQMNQQ 400>NP_001229852 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MINQMNQQ 9 MIN+ N+Q Sbjct: 311 MINKQNEQ 318>NP_057175 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MINQMNQQ 9 MIN+ N+Q Sbjct: 359 MINKQNEQ 366>NP_001037770 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 INQMNQQ 9 ++QMNQQ Sbjct: 421 LSQMNQQ 427>XP_005261682 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MINQMNQQ 9 MIN+ N+Q Sbjct: 261 MINKQNEQ 268>XP_006724323 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MINQMNQQ 9 MIN+ N+Q Sbjct: 402 MINKQNEQ 409>XP_005254217 Length = 347 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SMINQMNQQ 9 S+ NQ NQ+ Sbjct: 299 SLFNQKNQE 307>NP_055950 Length = 2012 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SMINQMN 7 SM+NQM+ Sbjct: 1108 SMLNQMS 1114>NP_001138295 Length = 1906 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MINQMNQQ 9 M+N++NQ+ Sbjct: 1086 MLNRINQE 1093>NP_005839 Length = 1863 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MINQMNQQ 9 M+N++NQ+ Sbjct: 1043 MLNRINQE 1050>NP_055797 Length = 2341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMINQM 6 SM+NQM Sbjct: 2170 SMVNQM 2175>NP_060063 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MINQMNQQ 9 ++NQMN++ Sbjct: 138 VVNQMNKK 145>NP_942595 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MINQMNQQ 9 ++NQMN++ Sbjct: 138 VVNQMNKK 145>XP_005254179 Length = 1173 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MINQMNQQ 9 M+N++NQ+ Sbjct: 353 MLNRINQE 360>XP_005254178 Length = 1863 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MINQMNQQ 9 M+N++NQ+ Sbjct: 1043 MLNRINQE 1050>XP_006720435 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MINQMNQQ 9 M+N++NQ+ Sbjct: 1087 MLNRINQE 1094>XP_005254177 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MINQMNQQ 9 M+N++NQ+ Sbjct: 1087 MLNRINQE 1094>XP_006720434 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MINQMNQQ 9 M+N++NQ+ Sbjct: 1087 MLNRINQE 1094>XP_005254176 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MINQMNQQ 9 M+N++NQ+ Sbjct: 1087 MLNRINQE 1094>XP_005267486 Length = 1421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMINQM 6 SM+NQM Sbjct: 1250 SMVNQM 1255>XP_006720145 Length = 1423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMINQM 6 SM+NQM Sbjct: 1252 SMVNQM 1257>XP_005267485 Length = 1459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMINQM 6 SM+NQM Sbjct: 1288 SMVNQM 1293>XP_005267483 Length = 2230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMINQM 6 SM+NQM Sbjct: 2059 SMVNQM 2064>XP_005267482 Length = 2243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMINQM 6 SM+NQM Sbjct: 2072 SMVNQM 2077>XP_005267481 Length = 2293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMINQM 6 SM+NQM Sbjct: 2122 SMVNQM 2127>XP_005267480 Length = 2336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMINQM 6 SM+NQM Sbjct: 2165 SMVNQM 2170>XP_005267479 Length = 2344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMINQM 6 SM+NQM Sbjct: 2173 SMVNQM 2178>XP_005267478 Length = 2348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMINQM 6 SM+NQM Sbjct: 2177 SMVNQM 2182>XP_005267477 Length = 2349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMINQM 6 SM+NQM Sbjct: 2178 SMVNQM 2183>XP_005250292 Length = 1654 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SMINQMN 7 SM+NQM+ Sbjct: 750 SMLNQMS 756>XP_005263174 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MINQMNQQ 9 ++NQMN++ Sbjct: 138 VVNQMNKK 145>NP_001116437 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SMINQMNQQ 9 S NQ NQQ Sbjct: 257 SHFNQTNQQ 265Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.110 0.264 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 320,002 Number of extensions: 400 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |