Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1935 NP_001035957 18 1935 XP_006721991 18 1935 XP_006721990 18 1935 XP_006721989 18 1935 XP_005258041 18 1935 XP_006721988 18 1935 XP_006721987 18 1935 XP_006721986 18 1935 XP_005258040 18 1935 XP_006721985 18 1935 NP_059116 17 4312 NP_064578 17 4312 XP_005267816 17 4312 XP_006718702 17 4312 XP_006718701 17 4312 XP_006718700 17 4312 XP_005274169 17 4312 XP_005274166 17 4312 XP_005274165 17 4312 XP_005274163 17 4312 NP_001273762 16 5631 NP_057013 16 5631 NP_660199 16 5631 NP_660198 16 5631 NP_005246 16 5631 NP_001191759 16 5631 XP_005272330 16 5631 XP_005272329 16 5631 XP_005272327 16 5631 XP_006713937 16 5631 XP_005272326 16 5631 XP_005272325 16 5631 NP_660200 16 5631>NP_000258 Length = 2818 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ILQSIAN Sbjct: 1422 SKILQSIAN 1430>NP_001035957 Length = 2839 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ILQSIAN Sbjct: 1443 SKILQSIAN 1451>XP_006721991 Length = 1632 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ILQSIAN Sbjct: 1453 SKILQSIAN 1461>XP_006721990 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ILQSIAN Sbjct: 1453 SKILQSIAN 1461>XP_006721989 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ILQSIAN Sbjct: 1453 SKILQSIAN 1461>XP_005258041 Length = 2836 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ILQSIAN Sbjct: 1422 SKILQSIAN 1430>XP_006721988 Length = 2846 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ILQSIAN Sbjct: 1432 SKILQSIAN 1440>XP_006721987 Length = 2849 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ILQSIAN Sbjct: 1453 SKILQSIAN 1461>XP_006721986 Length = 2854 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ILQSIAN Sbjct: 1440 SKILQSIAN 1448>XP_005258040 Length = 2857 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ILQSIAN Sbjct: 1443 SKILQSIAN 1451>XP_006721985 Length = 2867 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ILQSIAN Sbjct: 1453 SKILQSIAN 1461>NP_059116 Length = 781 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MILQSIAN 9 ++LQS+AN Sbjct: 713 LVLQSVAN 720>NP_064578 Length = 1322 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S I+QSIAN Sbjct: 242 SNIMQSIAN 250>XP_005267816 Length = 773 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MILQSIAN 9 ++LQS+AN Sbjct: 705 LVLQSVAN 712>XP_006718702 Length = 1151 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S I+QSIAN Sbjct: 192 SNIMQSIAN 200>XP_006718701 Length = 1309 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S I+QSIAN Sbjct: 243 SNIMQSIAN 251>XP_006718700 Length = 1216 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S I+QSIAN Sbjct: 257 SNIMQSIAN 265>XP_005274169 Length = 1272 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S I+QSIAN Sbjct: 206 SNIMQSIAN 214>XP_005274166 Length = 1323 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S I+QSIAN Sbjct: 257 SNIMQSIAN 265>XP_005274165 Length = 1323 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S I+QSIAN Sbjct: 243 SNIMQSIAN 251>XP_005274163 Length = 1337 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S I+QSIAN Sbjct: 257 SNIMQSIAN 265>NP_001273762 Length = 1213 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ++QS+AN Sbjct: 296 SKVIQSVAN 304>NP_057013 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MILQSIAN 9 +ILQSI+N Sbjct: 32 LILQSISN 39>NP_660199 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MILQSIAN 9 +ILQSI+N Sbjct: 32 LILQSISN 39>NP_660198 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MILQSIAN 9 +ILQSI+N Sbjct: 32 LILQSISN 39>NP_005246 Length = 1311 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ++QS+AN Sbjct: 394 SKVIQSVAN 402>NP_001191759 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MILQSIAN 9 +ILQSI+N Sbjct: 32 LILQSISN 39>XP_005272330 Length = 1140 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ++QS+AN Sbjct: 394 SKVIQSVAN 402>XP_005272329 Length = 1175 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ++QS+AN Sbjct: 258 SKVIQSVAN 266>XP_005272327 Length = 1236 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ++QS+AN Sbjct: 394 SKVIQSVAN 402>XP_006713937 Length = 1249 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ++QS+AN Sbjct: 332 SKVIQSVAN 340>XP_005272326 Length = 1262 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ++QS+AN Sbjct: 394 SKVIQSVAN 402>XP_005272325 Length = 1300 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMILQSIAN 9 S ++QS+AN Sbjct: 394 SKVIQSVAN 402>NP_660200 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MILQSIAN 9 +ILQSI+N Sbjct: 32 LILQSISN 39Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.122 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 217,088 Number of extensions: 202 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |