Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 18 1135 NP_003473 17 3301 XP_006719679 17 3301 XP_005269219 17 3301 XP_006719678 17 3301 XP_006719677 17 3301 NP_061135 16 5631 NP_001167560 16 5631 NP_001277074 16 5631 NP_056399 16 5631 NP_114423 16 5631 NP_001167561 16 5631 XP_005260914 16 5631 XP_005260913 16 5631 XP_006715571 16 5631 NP_001004480 16 5631 NP_694543 16 7355 NP_003230 16 7355 NP_001277140 16 7355 NP_001010855 16 7355 NP_699171 16 7355 NP_001160006 16 7355 NP_001160005 16 7355 XP_005268085 16 7355 XP_006715629 16 7355 XP_005248604 16 7355 XP_005248602 16 7355 XP_005270503 16 7355 XP_005270502 16 7355 NP_001136021 16 7355 NP_078970 16 7355 NP_077726 16 7355 NP_597703 15 9605 NP_001278308 15 9605 NP_001263272 15 9605 NP_001278253 15 9605 NP_001252543 15 9605 NP_001006643 15 9605 NP_001139813 15 9605 NP_001137472 15 9605 NP_001177739 15 9605 NP_071735 15 9605 NP_001071153 15 9605 XP_005276439 15 9605 XP_005276438 15 9605 XP_006726583 15 9605 XP_006722053 15 9605 XP_006722052 15 9605 XP_005254967 15 9605 XP_006720570 15 9605 XP_006718155 15 9605 XP_006717897 15 9605 XP_006717896 15 9605 XP_006717685 15 9605 XP_005271857 15 9605 XP_006717684 15 9605 XP_006717682 15 9605 XP_005271854 15 9605 XP_005265443 15 9605 XP_005265442 15 9605 XP_005265441 15 9605 XP_005265440 15 9605 XP_006710001 15 9605 NP_597704 15 9605>NP_004110 Length = 993 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SMHGSREVQ 9 SM GSREVQ Sbjct: 736 SMPGSREVQ 744>NP_003473 Length = 5537 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMHGSREVQ 9 S+HG RE++ Sbjct: 75 SLHGQRELR 83>XP_006719679 Length = 5536 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMHGSREVQ 9 S+HG RE++ Sbjct: 75 SLHGQRELR 83>XP_005269219 Length = 5537 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMHGSREVQ 9 S+HG RE++ Sbjct: 75 SLHGQRELR 83>XP_006719678 Length = 5539 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMHGSREVQ 9 S+HG RE++ Sbjct: 75 SLHGQRELR 83>XP_006719677 Length = 5540 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMHGSREVQ 9 S+HG RE++ Sbjct: 75 SLHGQRELR 83>NP_061135 Length = 648 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SMHGSRE 7 S+HG RE Sbjct: 516 SLHGDRE 522>NP_001167560 Length = 875 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SMHGSREVQ 9 S HG RE++ Sbjct: 608 SSHGFREIE 616>NP_001277074 Length = 350 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HGSREVQ 9 HGS+EV+ Sbjct: 103 HGSKEVK 109>NP_056399 Length = 368 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HGSREVQ 9 HGS+EV+ Sbjct: 121 HGSKEVK 127>NP_114423 Length = 891 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SMHGSREVQ 9 S HG RE++ Sbjct: 624 SSHGFREIE 632>NP_001167561 Length = 918 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SMHGSREVQ 9 S HG RE++ Sbjct: 651 SSHGFREIE 659>XP_005260914 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SMHGSREVQ 9 S HG RE++ Sbjct: 589 SSHGFREIE 597>XP_005260913 Length = 998 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SMHGSREVQ 9 S HG RE++ Sbjct: 731 SSHGFREIE 739>XP_006715571 Length = 628 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SMHGSRE 7 S+HG RE Sbjct: 496 SLHGDRE 502>NP_001004480 Length = 330 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 HGSREVQ 9 HG RE+Q Sbjct: 36 HGQREMQ 42>NP_694543 Length = 707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SMHGSREVQ 9 S+ G+REV+ Sbjct: 76 SLRGTREVE 84>NP_003230 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 MHGSRE 7 MHG RE Sbjct: 83 MHGERE 88>NP_001277140 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SMHGSREVQ 9 ++HG +EV+ Sbjct: 589 NLHGQQEVE 597>NP_001010855 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SMHGSREVQ 9 ++HG +EV+ Sbjct: 725 NLHGQQEVE 733>NP_699171 Length = 722 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMHGSREVQ 9 S+H REVQ Sbjct: 264 SVHQRREVQ 272>NP_001160006 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SMHGSRE 7 S+HG RE Sbjct: 420 SIHGDRE 426>NP_001160005 Length = 704 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SMHGSRE 7 S+HG RE Sbjct: 549 SIHGDRE 555>XP_005268085 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 MHGSRE 7 MHG RE Sbjct: 83 MHGERE 88>XP_006715629 Length = 1667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMHGSR 6 S+HGSR Sbjct: 386 SLHGSR 391>XP_005248604 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SMHGSRE 7 S+HG RE Sbjct: 511 SIHGDRE 517>XP_005248602 Length = 700 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SMHGSRE 7 S+HG RE Sbjct: 545 SIHGDRE 551>XP_005270503 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMHGSREVQ 9 S+H REVQ Sbjct: 296 SVHQRREVQ 304>XP_005270502 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMHGSREVQ 9 S+H REVQ Sbjct: 296 SVHQRREVQ 304>NP_001136021 Length = 690 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SMHGSRE 7 S+HG RE Sbjct: 535 SIHGDRE 541>NP_078970 Length = 1667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMHGSR 6 S+HGSR Sbjct: 386 SLHGSR 391>NP_077726 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SMHGSRE 7 S+HG RE Sbjct: 569 SIHGDRE 575>NP_597703 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 586 HGSRE 590>NP_001278308 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 501 HGSRE 505>NP_001263272 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 609 HGSRE 613>NP_001278253 Length = 2639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 1630 HGSRE 1634>NP_001252543 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 19 HGSRE 23>NP_001006643 Length = 489 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 19 HGSRE 23>NP_001139813 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 417 HGSRE 421>NP_001137472 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 609 HGSRE 613>NP_001177739 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 609 HGSRE 613>NP_071735 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMHGSR 6 S+HGSR Sbjct: 222 SVHGSR 227>NP_001071153 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 586 HGSRE 590>XP_005276439 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 586 HGSRE 590>XP_005276438 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 609 HGSRE 613>XP_006726583 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 408 HGSRE 412>XP_006722053 Length = 2608 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 1599 HGSRE 1603>XP_006722052 Length = 2631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 1630 HGSRE 1634>XP_005254967 Length = 1175 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMHGSREVQ 9 S G+REVQ Sbjct: 1017 SRSGNREVQ 1025>XP_006720570 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMHGSREVQ 9 S G+REVQ Sbjct: 1023 SRSGNREVQ 1031>XP_006718155 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 408 HGSRE 412>XP_006717897 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MHGSREV 8 M GSRE+ Sbjct: 4 MEGSREI 10>XP_006717896 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MHGSREV 8 M GSRE+ Sbjct: 30 MEGSREI 36>XP_006717685 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 570 HGSRE 574>XP_005271857 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 609 HGSRE 613>XP_006717684 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 609 HGSRE 613>XP_006717682 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 639 HGSRE 643>XP_005271854 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 662 HGSRE 666>XP_005265443 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMHGSR 6 S+HGSR Sbjct: 133 SVHGSR 138>XP_005265442 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMHGSR 6 S+HGSR Sbjct: 222 SVHGSR 227>XP_005265441 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMHGSR 6 S+HGSR Sbjct: 222 SVHGSR 227>XP_005265440 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SMHGSR 6 S+HGSR Sbjct: 222 SVHGSR 227>XP_006710001 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 96 HGSRE 100>NP_597704 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HGSRE 7 HGSRE Sbjct: 473 HGSRE 477Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.117 0.313 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 662,257 Number of extensions: 1021 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |