Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 18 1935 NP_001075109 18 1935 NP_001269504 17 4312 NP_001269507 17 4312 NP_001269506 17 4312 NP_954595 17 4312 NP_954673 17 4312 NP_071887 17 4312 NP_001027459 17 4312 NP_068823 17 4312 NP_001244328 17 4312 NP_001244327 17 4312 NP_001244324 17 4312 NP_001244322 17 4312 NP_001269508 17 4312 NP_001269505 17 4312 NP_001244326 17 4312 NP_001244323 17 4312 XP_006726463 17 4312 XP_006712963 17 4312 XP_006710204 17 4312 NP_003341 16 5631 XP_005251357 16 5631 NP_001138775 16 7355 NP_653287 16 7355 NP_006718 16 7355 NP_001008781 16 7355 NP_001273384 16 7355 NP_068764 16 7355 NP_001273385 16 7355 XP_006726250 16 7355 XP_006726210 16 7355 XP_006726112 16 7355 XP_006726013 16 7355 XP_006725925 16 7355 XP_006725825 16 7355 XP_006725698 16 7355 XP_005249342 16 7355 NP_056297 16 7355 NP_443187 16 7355 NP_071410 15 9605 NP_001186562 15 9605 NP_001017403 15 9605 NP_067649 15 9605 NP_001017404 15 9605 NP_001091742 15 9605 NP_001137450 15 9605 NP_001788 15 9605 NP_002121 15 9605 XP_005255824 15 9605 XP_005255823 15 9605 XP_005255821 15 9605 XP_005255820 15 9605 XP_005255819 15 9605 XP_005255818 15 9605 XP_006718827 15 9605 XP_005248352 15 9605 XP_006711543 15 9605 XP_005245461 15 9605 NP_115536 15 9605 NP_776159 15 9605>NP_008835 Length = 4128 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLYSLKIEV 9 SLYS KIEV Sbjct: 2544 SLYSPKIEV 2552>NP_001075109 Length = 4097 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLYSLKIEV 9 SLYS KIEV Sbjct: 2544 SLYSPKIEV 2552>NP_001269504 Length = 91 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 8 IYSLKIE 14>NP_001269507 Length = 91 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 8 IYSLKIE 14>NP_001269506 Length = 91 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 8 IYSLKIE 14>NP_954595 Length = 170 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 87 IYSLKIE 93>NP_954673 Length = 370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 287 IYSLKIE 293>NP_071887 Length = 103 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 20 IYSLKIE 26>NP_001027459 Length = 147 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 64 IYSLKIE 70>NP_068823 Length = 170 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 87 IYSLKIE 93>NP_001244328 Length = 105 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 22 IYSLKIE 28>NP_001244327 Length = 105 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 22 IYSLKIE 28>NP_001244324 Length = 144 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 61 IYSLKIE 67>NP_001244322 Length = 170 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 87 IYSLKIE 93>NP_001269508 Length = 105 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 22 IYSLKIE 28>NP_001269505 Length = 105 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 22 IYSLKIE 28>NP_001244326 Length = 105 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 22 IYSLKIE 28>NP_001244323 Length = 103 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 20 IYSLKIE 26>XP_006726463 Length = 119 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 36 IYSLKIE 42>XP_006712963 Length = 119 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 36 IYSLKIE 42>XP_006710204 Length = 119 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLKIE Sbjct: 36 IYSLKIE 42>NP_003341 Length = 145 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLK+E Sbjct: 62 IYSLKVE 68>XP_005251357 Length = 105 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 +YSLK+E Sbjct: 22 IYSLKVE 28>NP_001138775 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LYSLKIEV 9 LY LK+E+ Sbjct: 317 LYELKVEL 324>NP_653287 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LYSLKIEV 9 LY LK+E+ Sbjct: 311 LYELKVEL 318>NP_006718 Length = 788 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LYSLKIE 8 LY+LK+E Sbjct: 343 LYTLKVE 349>NP_001008781 Length = 4557 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YSLKIE 8 YSLKIE Sbjct: 900 YSLKIE 905Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SLYSLKIEV 9 S+Y++ +EV Sbjct: 1427 SIYNMSVEV 1435>NP_001273384 Length = 405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SLYSLKIEV 9 +LY+L+IE+ Sbjct: 19 TLYALRIEL 27>NP_068764 Length = 405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SLYSLKIEV 9 +LY+L+IE+ Sbjct: 19 TLYALRIEL 27>NP_001273385 Length = 361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SLYSLKIEV 9 +LY+L+IE+ Sbjct: 300 TLYALRIEL 308>XP_006726250 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LYSLKIEV 9 LY LK+E+ Sbjct: 221 LYELKVEL 228>XP_006726210 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LYSLKIEV 9 LY LK+E+ Sbjct: 221 LYELKVEL 228>XP_006726112 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LYSLKIEV 9 LY LK+E+ Sbjct: 221 LYELKVEL 228>XP_006726013 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LYSLKIEV 9 LY LK+E+ Sbjct: 221 LYELKVEL 228>XP_006725925 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LYSLKIEV 9 LY LK+E+ Sbjct: 221 LYELKVEL 228>XP_006725825 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LYSLKIEV 9 LY LK+E+ Sbjct: 221 LYELKVEL 228>XP_006725698 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LYSLKIEV 9 LY LK+E+ Sbjct: 221 LYELKVEL 228>XP_005249342 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SLYSLKIEV 9 +LY+L+IE+ Sbjct: 300 TLYALRIEL 308>NP_056297 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SLYSLKIEV 9 +LY+L+IE+ Sbjct: 300 TLYALRIEL 308>NP_443187 Length = 710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YSLKIEV 9 Y+LKIE+ Sbjct: 116 YTLKIEI 122>NP_071410 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SLYSLK 6 SLYSLK Sbjct: 666 SLYSLK 671>NP_001186562 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SLYSLK 6 SLYSLK Sbjct: 666 SLYSLK 671>NP_001017403 Length = 967 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LYSLKI 7 LYSLKI Sbjct: 113 LYSLKI 118>NP_067649 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LYSLKI 7 LYSLKI Sbjct: 61 LYSLKI 66>NP_001017404 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LYSLKI 7 LYSLKI Sbjct: 70 LYSLKI 75>NP_001091742 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SLYSLKI 7 +LYSLK+ Sbjct: 382 TLYSLKV 388>NP_001137450 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLYSLKIEV 9 SLY +++EV Sbjct: 146 SLYVIRLEV 154>NP_001788 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YSLKIE 8 YSLK+E Sbjct: 343 YSLKVE 348>NP_002121 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SLYSLKI 7 +LYSLK+ Sbjct: 382 TLYSLKV 388>XP_005255824 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YSLKIE 8 YSLK+E Sbjct: 343 YSLKVE 348>XP_005255823 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YSLKIE 8 YSLK+E Sbjct: 343 YSLKVE 348>XP_005255821 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YSLKIE 8 YSLK+E Sbjct: 343 YSLKVE 348>XP_005255820 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YSLKIE 8 YSLK+E Sbjct: 343 YSLKVE 348>XP_005255819 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YSLKIE 8 YSLK+E Sbjct: 343 YSLKVE 348>XP_005255818 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YSLKIE 8 YSLK+E Sbjct: 343 YSLKVE 348>XP_006718827 Length = 3479 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SLYSLKIEV 9 S+Y++ +EV Sbjct: 317 SIYNMSVEV 325>XP_005248352 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SLYSLKI 7 +LYSLK+ Sbjct: 340 TLYSLKV 346>XP_006711543 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LYSLKI 7 LYSLKI Sbjct: 113 LYSLKI 118>XP_005245461 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LYSLKI 7 LYSLKI Sbjct: 70 LYSLKI 75>NP_115536 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SLYSLK 6 SLYSLK Sbjct: 1057 SLYSLK 1062>NP_776159 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLYSLKIEV 9 SLY +++EV Sbjct: 146 SLYVIRLEV 154Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.133 0.316 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 456,022 Number of extensions: 766 Number of successful extensions: 62 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |