Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001185761                                                           19     665
NP_001185763                                                           19     665
NP_055459                                                              19     665
XP_006711719                                                           19     665
XP_006711718                                                           19     665
XP_006711717                                                           19     665
XP_006711716                                                           19     665
XP_006711715                                                           19     665
XP_006711714                                                           19     665
XP_006711713                                                           19     665
XP_006711712                                                           19     665
XP_006711711                                                           19     665
XP_006711710                                                           19     665
XP_006711709                                                           19     665
XP_005277503                                                           19     665
XP_005273038                                                           19     665
XP_006711708                                                           19     665
XP_005277500                                                           19     665
XP_006711707                                                           19     665
XP_005277499                                                           19     665
XP_006711706                                                           19     665
XP_006711705                                                           19     665
XP_006710143                                                           19     665
XP_006710142                                                           19     665
XP_006710141                                                           19     665
XP_006726410                                                           18    1935
XP_006711164                                                           18    1935
NP_001277189                                                           17    4312
NP_055968                                                              17    4312
NP_001277188                                                           17    4312
XP_005248759                                                           17    4312
XP_006715489                                                           17    4312
XP_005248758                                                           17    4312
NP_115532                                                              16    5631
NP_076414                                                              16    5631
NP_001002259                                                           16    5631
NP_031374                                                              16    5631
NP_001193785                                                           16    5631
NP_660317                                                              16    5631
NP_001182315                                                           16    5631
NP_001182316                                                           16    5631
NP_001180317                                                           16    5631
XP_005257146                                                           16    5631
XP_006720988                                                           16    5631
XP_006720987                                                           16    5631
XP_006720986                                                           16    5631
XP_005255563                                                           16    5631
XP_005255562                                                           16    5631
XP_006719211                                                           16    5631
XP_006719210                                                           16    5631
XP_006719209                                                           16    5631
XP_006719208                                                           16    5631
XP_006719207                                                           16    5631
XP_006719206                                                           16    5631
XP_006719205                                                           16    5631
XP_006719204                                                           16    5631
XP_006719203                                                           16    5631
XP_006719202                                                           16    5631
XP_006719201                                                           16    5631
XP_006719200                                                           16    5631
XP_006711288                                                           16    5631
XP_006711287                                                           16    5631
NP_055693                                                              15    9605
NP_055178                                                              15    9605
NP_001018098                                                           15    9605
NP_060154                                                              15    9605
NP_001264984                                                           15    9605
NP_060550                                                              15    9605
NP_438170                                                              15    9605
NP_065872                                                              15    9605
NP_055454                                                              15    9605
NP_065923                                                              15    9605
NP_065859                                                              15    9605
NP_077015                                                              15    9605
XP_005266395                                                           15    9605
XP_005264815                                                           15    9605
XP_005264814                                                           15    9605
XP_006711862                                                           15    9605
XP_005273271                                                           15    9605
XP_005273270                                                           15    9605
XP_005273269                                                           15    9605
XP_005273268                                                           15    9605
XP_005273266                                                           15    9605
XP_006711861                                                           15    9605
NP_001244899                                                           15    9605
>NP_001185761
          Length = 2240

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1215 SLVKQDSKQ 1223
>NP_001185763
          Length = 2362

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1259 SLVKQDSKQ 1267
>NP_055459
          Length = 2346

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1259 SLVKQDSKQ 1267
>XP_006711719
          Length = 2302

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1215 SLVKQDSKQ 1223
>XP_006711718
          Length = 1436

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   SLVEQDSKQ 9
           SLV+QDSKQ
Sbjct: 266 SLVKQDSKQ 274
>XP_006711717
          Length = 2385

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1215 SLVKQDSKQ 1223
>XP_006711716
          Length = 2411

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1324 SLVKQDSKQ 1332
>XP_006711715
          Length = 2428

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1258 SLVKQDSKQ 1266
>XP_006711714
          Length = 2429

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1259 SLVKQDSKQ 1267
>XP_006711713
          Length = 2432

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1262 SLVKQDSKQ 1270
>XP_006711712
          Length = 2473

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1422 SLVKQDSKQ 1430
>XP_006711711
          Length = 2482

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1312 SLVKQDSKQ 1320
>XP_006711710
          Length = 2494

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1324 SLVKQDSKQ 1332
>XP_006711709
          Length = 2495

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1325 SLVKQDSKQ 1333
>XP_005277503
          Length = 2498

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1422 SLVKQDSKQ 1430
>XP_005273038
          Length = 2509

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1422 SLVKQDSKQ 1430
>XP_006711708
          Length = 2512

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1422 SLVKQDSKQ 1430
>XP_005277500
          Length = 2525

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1422 SLVKQDSKQ 1430
>XP_006711707
          Length = 2553

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1422 SLVKQDSKQ 1430
>XP_005277499
          Length = 2561

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1422 SLVKQDSKQ 1430
>XP_006711706
          Length = 2591

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1421 SLVKQDSKQ 1429
>XP_006711705
          Length = 2592

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDSKQ
Sbjct: 1422 SLVKQDSKQ 1430
>XP_006710143
          Length = 562

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   SLVEQDSKQ 9
           SLV+QDSKQ
Sbjct: 101 SLVKQDSKQ 109
>XP_006710142
          Length = 671

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   SLVEQDSKQ 9
           SLV+QDSKQ
Sbjct: 210 SLVKQDSKQ 218
>XP_006710141
          Length = 672

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   SLVEQDSKQ 9
           SLV+QDSKQ
Sbjct: 211 SLVKQDSKQ 219
>XP_006726410
          Length = 2087

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDS+Q
Sbjct: 1062 SLVKQDSEQ 1070
>XP_006711164
          Length = 2087

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 9/9 (100%)

Query: 1    SLVEQDSKQ 9
            SLV+QDS+Q
Sbjct: 1062 SLVKQDSEQ 1070
>NP_001277189
          Length = 736

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   VEQDSKQ 9
           VEQDSK+
Sbjct: 318 VEQDSKE 324
>NP_055968
          Length = 2039

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   VEQDSKQ 9
           VEQDSK+
Sbjct: 318 VEQDSKE 324
>NP_001277188
          Length = 1951

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   VEQDSKQ 9
           VEQDSK+
Sbjct: 230 VEQDSKE 236
>XP_005248759
          Length = 1951

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   VEQDSKQ 9
           VEQDSK+
Sbjct: 230 VEQDSKE 236
>XP_006715489
          Length = 2039

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   VEQDSKQ 9
           VEQDSK+
Sbjct: 318 VEQDSKE 324
>XP_005248758
          Length = 2039

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   VEQDSKQ 9
           VEQDSK+
Sbjct: 318 VEQDSKE 324
>NP_115532
          Length = 960

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 536 EQDSKQ 541
>NP_076414
          Length = 1077

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 536 EQDSKQ 541
>NP_001002259
          Length = 1127

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 536 EQDSKQ 541
>NP_031374
          Length = 670

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   SLVEQDSKQ 9
           S++EQDS++
Sbjct: 396 SMLEQDSRR 404
>NP_001193785
          Length = 905

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 536 EQDSKQ 541
>NP_660317
          Length = 258

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   SLVEQDSK 8
           SLV+QDS+
Sbjct: 237 SLVQQDSQ 244
>NP_001182315
          Length = 258

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   SLVEQDSK 8
           SLV+QDS+
Sbjct: 237 SLVQQDSQ 244
>NP_001182316
          Length = 258

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   SLVEQDSK 8
           SLV+QDS+
Sbjct: 237 SLVQQDSQ 244
>NP_001180317
          Length = 683

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 357 EQDSKQ 362
>XP_005257146
          Length = 258

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   SLVEQDSK 8
           SLV+QDS+
Sbjct: 237 SLVQQDSQ 244
>XP_006720988
          Length = 440

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  EQDSKQ 9
          EQDSKQ
Sbjct: 64 EQDSKQ 69
>XP_006720987
          Length = 365

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 357 EQDSKQ 362
>XP_006720986
          Length = 554

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 357 EQDSKQ 362
>XP_005255563
          Length = 663

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 287 EQDSKQ 292
>XP_005255562
          Length = 733

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 357 EQDSKQ 362
>XP_006719211
          Length = 794

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 203 EQDSKQ 208
>XP_006719210
          Length = 940

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 536 EQDSKQ 541
>XP_006719209
          Length = 941

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 536 EQDSKQ 541
>XP_006719208
          Length = 961

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 536 EQDSKQ 541
>XP_006719207
          Length = 1043

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 536 EQDSKQ 541
>XP_006719206
          Length = 1046

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 455 EQDSKQ 460
>XP_006719205
          Length = 1057

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 536 EQDSKQ 541
>XP_006719204
          Length = 1078

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 536 EQDSKQ 541
>XP_006719203
          Length = 1091

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 536 EQDSKQ 541
>XP_006719202
          Length = 1092

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 536 EQDSKQ 541
>XP_006719201
          Length = 1106

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 536 EQDSKQ 541
>XP_006719200
          Length = 1126

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   EQDSKQ 9
           EQDSKQ
Sbjct: 536 EQDSKQ 541
>XP_006711288
          Length = 604

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   SLVEQDSKQ 9
           S++EQDS++
Sbjct: 330 SMLEQDSRR 338
>XP_006711287
          Length = 669

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   SLVEQDSKQ 9
           S++EQDS++
Sbjct: 396 SMLEQDSRR 404
>NP_055693
          Length = 648

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   LVEQDSK 8
           L+EQD K
Sbjct: 561 LIEQDKK 567
>NP_055178
          Length = 4579

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LVEQDSKQ 9
            L EQ+SKQ
Sbjct: 1347 LSEQESKQ 1354
>NP_001018098
          Length = 3628

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    SLVEQDSKQ 9
            SLV  +SKQ
Sbjct: 3097 SLVNNESKQ 3105
>NP_060154
          Length = 3710

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    SLVEQDSKQ 9
            SLV  +SKQ
Sbjct: 3054 SLVNNESKQ 3062
>NP_001264984
          Length = 4432

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LVEQDSKQ 9
            L EQ+SKQ
Sbjct: 1200 LSEQESKQ 1207
>NP_060550
          Length = 3585

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    SLVEQDSKQ 9
            SLV  +SKQ
Sbjct: 3054 SLVNNESKQ 3062
>NP_438170
          Length = 434

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   SLVEQDS 7
           SLVE+DS
Sbjct: 141 SLVEKDS 147
>NP_065872
          Length = 3753

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    SLVEQDSKQ 9
            SLV  +SKQ
Sbjct: 3097 SLVNNESKQ 3105
>NP_055454
          Length = 1564

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LVEQDSK 8
           LVE DSK
Sbjct: 264 LVEMDSK 270
>NP_065923
          Length = 1028

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   SLVEQDSKQ 9
           S VE+DS++
Sbjct: 164 SFVEEDSRR 172
>NP_065859
          Length = 1722

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LVEQDSK 8
           L+E+DSK
Sbjct: 883 LIEKDSK 889
>NP_077015
          Length = 1004

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   SLVEQDS 7
           SLVE+DS
Sbjct: 378 SLVEKDS 384
>XP_005266395
          Length = 4588

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LVEQDSKQ 9
            L EQ+SKQ
Sbjct: 1356 LSEQESKQ 1363
>XP_005264815
          Length = 923

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   SLVEQDSKQ 9
           S VE+DS++
Sbjct: 164 SFVEEDSRR 172
>XP_005264814
          Length = 1028

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   SLVEQDSKQ 9
           S VE+DS++
Sbjct: 164 SFVEEDSRR 172
>XP_006711862
          Length = 1704

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LVEQDSK 8
           L+E+DSK
Sbjct: 883 LIEKDSK 889
>XP_005273271
          Length = 1722

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LVEQDSK 8
           L+E+DSK
Sbjct: 883 LIEKDSK 889
>XP_005273270
          Length = 1722

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LVEQDSK 8
           L+E+DSK
Sbjct: 883 LIEKDSK 889
>XP_005273269
          Length = 1722

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LVEQDSK 8
           L+E+DSK
Sbjct: 883 LIEKDSK 889
>XP_005273268
          Length = 1722

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LVEQDSK 8
           L+E+DSK
Sbjct: 883 LIEKDSK 889
>XP_005273266
          Length = 1722

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LVEQDSK 8
           L+E+DSK
Sbjct: 883 LIEKDSK 889
>XP_006711861
          Length = 1722

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LVEQDSK 8
           L+E+DSK
Sbjct: 883 LIEKDSK 889
>NP_001244899
          Length = 740

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   SLVEQDS 7
           SLVE+DS
Sbjct: 378 SLVEKDS 384
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.288    0.108    0.238 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 566,829
Number of extensions: 925
Number of successful extensions: 85
Number of sequences better than 10000.0: 85
Number of HSP's gapped: 85
Number of HSP's successfully gapped: 85
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (14.9 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package