Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 18 1135 XP_005262424 18 1135 NP_060127 17 3301 XP_005264437 17 3301 NP_982261 17 3301 NP_001002243 17 3301 NP_067047 16 5631 XP_006717281 16 5631 XP_006717279 16 5631 XP_006717278 16 5631 XP_006717277 16 5631 XP_006717276 16 5631 XP_006717275 16 5631 XP_006717274 16 5631 XP_006717273 16 5631 XP_006717272 16 5631 NP_056099 16 7355 NP_078836 16 7355 XP_005269208 16 7355 XP_006719664 16 7355 XP_005269207 16 7355 XP_006714237 16 7355 XP_006710565 16 7355 XP_006710564 16 7355 XP_005270743 16 7355 NP_115536 16 7355 NP_001135786 15 9605 NP_001129522 15 9605 NP_612461 15 9605 NP_005738 15 9605 NP_001003811 15 9605 NP_543152 15 9605 NP_112566 15 9605 NP_031378 15 9605>NP_722576 Length = 3080 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SLTSFKSA 8 SLTSFKSA Sbjct: 1770 SLTSFKSA 1777>XP_005262424 Length = 2875 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SLTSFKSA 8 SLTSFKSA Sbjct: 1565 SLTSFKSA 1572>NP_060127 Length = 909 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SLTSFKS 7 SLTSFKS Sbjct: 77 SLTSFKS 83>XP_005264437 Length = 937 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SLTSFKS 7 SLTSFKS Sbjct: 77 SLTSFKS 83>NP_982261 Length = 936 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SLTSFKS 7 SLTSFKS Sbjct: 77 SLTSFKS 83>NP_001002243 Length = 908 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SLTSFKS 7 SLTSFKS Sbjct: 77 SLTSFKS 83>NP_067047 Length = 2506 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TSFKSAF 9 T FKSAF Sbjct: 2229 TGFKSAF 2235>XP_006717281 Length = 1702 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TSFKSAF 9 T FKSAF Sbjct: 1425 TGFKSAF 1431>XP_006717279 Length = 2506 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TSFKSAF 9 T FKSAF Sbjct: 2229 TGFKSAF 2235>XP_006717278 Length = 2566 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TSFKSAF 9 T FKSAF Sbjct: 2289 TGFKSAF 2295>XP_006717277 Length = 2567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TSFKSAF 9 T FKSAF Sbjct: 2290 TGFKSAF 2296>XP_006717276 Length = 2567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TSFKSAF 9 T FKSAF Sbjct: 2290 TGFKSAF 2296>XP_006717275 Length = 2567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TSFKSAF 9 T FKSAF Sbjct: 2290 TGFKSAF 2296>XP_006717274 Length = 2567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TSFKSAF 9 T FKSAF Sbjct: 2290 TGFKSAF 2296>XP_006717273 Length = 2567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TSFKSAF 9 T FKSAF Sbjct: 2290 TGFKSAF 2296>XP_006717272 Length = 2567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TSFKSAF 9 T FKSAF Sbjct: 2290 TGFKSAF 2296>NP_056099 Length = 3375 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLTSFKSAF 9 SLT FK F Sbjct: 1695 SLTQFKEEF 1703>NP_078836 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLTSFKSAF 9 SLT FK+ F Sbjct: 414 SLTRFKTLF 422>XP_005269208 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLTSFKSAF 9 SLT FK+ F Sbjct: 414 SLTRFKTLF 422>XP_006719664 Length = 578 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLTSFKSAF 9 SLT FK+ F Sbjct: 306 SLTRFKTLF 314>XP_005269207 Length = 685 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLTSFKSAF 9 SLT FK+ F Sbjct: 413 SLTRFKTLF 421>XP_006714237 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLTSFKSA 8 SLTSF+ A Sbjct: 4 SLTSFRQA 11>XP_006710565 Length = 3140 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLTSFKSAF 9 SLT FK F Sbjct: 1460 SLTQFKEEF 1468>XP_006710564 Length = 3432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLTSFKSAF 9 SLT FK F Sbjct: 1752 SLTQFKEEF 1760>XP_005270743 Length = 3453 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLTSFKSAF 9 SLT FK F Sbjct: 1773 SLTQFKEEF 1781>NP_115536 Length = 1222 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLTSFKSAF 9 SLT F +AF Sbjct: 183 SLTGFATAF 191>NP_001135786 Length = 166 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TSFKSAF 9 TSF SAF Sbjct: 120 TSFTSAF 126>NP_001129522 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTSFKSAF 9 L FKSAF Sbjct: 216 LKQFKSAF 223>NP_612461 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTSFKSAF 9 L FKSAF Sbjct: 216 LKQFKSAF 223>NP_005738 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSFKSAF 9 +TSF SAF Sbjct: 235 VTSFVSAF 242>NP_001003811 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTSFKSAF 9 LTSFK ++ Sbjct: 900 LTSFKESY 907>NP_543152 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TSFKSAF 9 TSF SAF Sbjct: 171 TSFTSAF 177>NP_112566 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTSFKSAF 9 LTSFK ++ Sbjct: 885 LTSFKESY 892>NP_031378 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTSFKSAF 9 +TSF SAF Sbjct: 235 VTSFVSAF 242Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.120 0.300 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 322,482 Number of extensions: 321 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |