Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 18 1935 XP_005262424 18 1935 NP_997264 17 3301 NP_001230925 17 4312 NP_001027 17 4312 NP_073619 16 5631 NP_001140177 16 5631 XP_006719255 16 5631 XP_006719254 16 5631 XP_006719253 16 5631 XP_006719252 16 5631 XP_006719251 16 5631 XP_006719250 16 5631 NP_001008219 16 7355 NP_004029 16 7355 NP_001008220 16 7355 NP_001008222 16 7355 NP_001026 16 7355 NP_056190 16 7355 NP_955749 16 7355 NP_000690 16 7355 NP_066188 16 7355 XP_006711873 16 7355 XP_006711872 16 7355 XP_006711871 16 7355 XP_006711870 16 7355 XP_006711869 16 7355 XP_006711868 16 7355 XP_006711867 16 7355 XP_006711866 16 7355 XP_006711865 16 7355 XP_006710644 16 7355 XP_005270818 16 7355 XP_006710643 16 7355 XP_005270815 16 7355 XP_006710642 16 7355 XP_005270812 16 7355 NP_060034 15 9605 NP_001035026 15 9605 NP_631901 15 9605 NP_683684 15 9605 NP_001154901 15 9605 NP_036273 15 9605 NP_659437 15 9605 XP_005266398 15 9605 XP_005266397 15 9605 XP_006714518 15 9605 XP_006714517 15 9605 XP_006714516 15 9605 XP_006714515 15 9605>NP_722576 Length = 3080 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLTLQTRLI 9 SLTL TRLI Sbjct: 506 SLTLPTRLI 514>XP_005262424 Length = 2875 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLTLQTRLI 9 SLTL TRLI Sbjct: 301 SLTLPTRLI 309>NP_997264 Length = 292 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TLQTRLI 9 TLQTRLI Sbjct: 39 TLQTRLI 45>NP_001230925 Length = 4865 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLTLQTRLI 9 +L LQTRLI Sbjct: 628 NLLLQTRLI 636>NP_001027 Length = 4870 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLTLQTRLI 9 +L LQTRLI Sbjct: 628 NLLLQTRLI 636>NP_073619 Length = 1183 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTLQTRL 8 +TLQTRL Sbjct: 1142 ITLQTRL 1148>NP_001140177 Length = 1570 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLTLQTRLI 9 SLT+ TRLI Sbjct: 460 SLTVLTRLI 468>XP_006719255 Length = 485 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTLQTRL 8 +TLQTRL Sbjct: 444 ITLQTRL 450>XP_006719254 Length = 810 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTLQTRL 8 +TLQTRL Sbjct: 769 ITLQTRL 775>XP_006719253 Length = 1031 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTLQTRL 8 +TLQTRL Sbjct: 990 ITLQTRL 996>XP_006719252 Length = 1031 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTLQTRL 8 +TLQTRL Sbjct: 990 ITLQTRL 996>XP_006719251 Length = 1116 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTLQTRL 8 +TLQTRL Sbjct: 1075 ITLQTRL 1081>XP_006719250 Length = 1141 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTLQTRL 8 +TLQTRL Sbjct: 1100 ITLQTRL 1106>NP_001008219 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SLTLQTRL 8 SLTLQT L Sbjct: 452 SLTLQTGL 459>NP_004029 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SLTLQTRL 8 SLTLQT L Sbjct: 452 SLTLQTGL 459>NP_001008220 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SLTLQTRL 8 SLTLQT L Sbjct: 452 SLTLQTGL 459>NP_001008222 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SLTLQTRL 8 SLTLQT L Sbjct: 452 SLTLQTGL 459>NP_001026 Length = 4967 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTLQTRLI 9 L LQTRL+ Sbjct: 642 LLLQTRLV 649>NP_056190 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTLQTRL 8 LTL+TRL Sbjct: 749 LTLETRL 755>NP_955749 Length = 884 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTLQTRL 8 LTL+TRL Sbjct: 749 LTLETRL 755>NP_000690 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SLTLQTRL 8 SLTLQT L Sbjct: 452 SLTLQTGL 459>NP_066188 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SLTLQTRL 8 SLTLQT L Sbjct: 452 SLTLQTGL 459>XP_006711873 Length = 4954 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTLQTRLI 9 L LQTRL+ Sbjct: 642 LLLQTRLV 649>XP_006711872 Length = 2735 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTLQTRLI 9 L LQTRL+ Sbjct: 642 LLLQTRLV 649>XP_006711871 Length = 4906 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTLQTRLI 9 L LQTRL+ Sbjct: 642 LLLQTRLV 649>XP_006711870 Length = 4965 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTLQTRLI 9 L LQTRL+ Sbjct: 642 LLLQTRLV 649>XP_006711869 Length = 4973 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTLQTRLI 9 L LQTRL+ Sbjct: 642 LLLQTRLV 649>XP_006711868 Length = 4975 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTLQTRLI 9 L LQTRL+ Sbjct: 642 LLLQTRLV 649>XP_006711867 Length = 4977 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTLQTRLI 9 L LQTRL+ Sbjct: 642 LLLQTRLV 649>XP_006711866 Length = 4984 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTLQTRLI 9 L LQTRL+ Sbjct: 642 LLLQTRLV 649>XP_006711865 Length = 4985 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTLQTRLI 9 L LQTRL+ Sbjct: 642 LLLQTRLV 649>XP_006710644 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SLTLQTRL 8 SLTLQT L Sbjct: 452 SLTLQTGL 459>XP_005270818 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SLTLQTRL 8 SLTLQT L Sbjct: 452 SLTLQTGL 459>XP_006710643 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SLTLQTRL 8 SLTLQT L Sbjct: 452 SLTLQTGL 459>XP_005270815 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SLTLQTRL 8 SLTLQT L Sbjct: 452 SLTLQTGL 459>XP_006710642 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SLTLQTRL 8 SLTLQT L Sbjct: 452 SLTLQTGL 459>XP_005270812 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SLTLQTRL 8 SLTLQT L Sbjct: 452 SLTLQTGL 459>NP_060034 Length = 2551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TLQTRL 8 TLQTRL Sbjct: 2396 TLQTRL 2401>NP_001035026 Length = 874 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQTRLI 9 +LQTRLI Sbjct: 827 SLQTRLI 833>NP_631901 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTLQTRLI 9 LTLQ RL+ Sbjct: 125 LTLQERLL 132>NP_683684 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTLQTRLI 9 LTLQ RL+ Sbjct: 136 LTLQERLL 143>NP_001154901 Length = 490 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQTRLI 9 TLQ+RLI Sbjct: 361 TLQSRLI 367>NP_036273 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQTRLI 9 +LQTRLI Sbjct: 840 SLQTRLI 846>NP_659437 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQTRLI 9 TLQ+RLI Sbjct: 336 TLQSRLI 342>XP_005266398 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQTRLI 9 +LQTRLI Sbjct: 408 SLQTRLI 414>XP_005266397 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQTRLI 9 +LQTRLI Sbjct: 662 SLQTRLI 668>XP_006714518 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQTRLI 9 TLQ+RLI Sbjct: 316 TLQSRLI 322>XP_006714517 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQTRLI 9 TLQ+RLI Sbjct: 336 TLQSRLI 342>XP_006714516 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQTRLI 9 TLQ+RLI Sbjct: 341 TLQSRLI 347>XP_006714515 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLQTRLI 9 TLQ+RLI Sbjct: 361 TLQSRLI 367Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.137 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 312,666 Number of extensions: 431 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |