Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 665 XP_005262424 19 665 NP_663623 16 5631 NP_001026850 16 5631 NP_004341 16 5631 NP_078966 16 5631 NP_001013725 16 5631 NP_056386 16 5631 NP_001010854 16 5631 XP_005255038 16 5631 XP_005255037 16 5631 XP_005254450 16 5631 XP_005254449 16 5631 XP_005267424 16 5631 XP_006720122 16 5631 XP_006720121 16 5631 XP_006716738 16 5631 XP_006716737 16 5631 XP_005272407 16 5631 XP_006716177 16 5631 XP_006715520 16 5631 XP_005246081 16 5631 NP_001093879 16 5631 NP_116291 16 5631 NP_060726 16 7355 NP_001138624 16 7355 NP_689628 16 7355 NP_620063 16 7355 NP_055917 16 7355 NP_079079 16 7355 NP_001165335 16 7355 XP_005273458 16 7355 XP_005273457 16 7355 XP_006716349 16 7355 XP_006710633 16 7355 XP_006710632 16 7355 XP_006710631 16 7355 XP_006710630 16 7355 XP_006710629 16 7355 XP_006710628 16 7355 XP_006710627 16 7355 XP_006710626 16 7355 NP_001839 15 9605 NP_003310 15 9605 NP_000183 15 9605 NP_001136233 15 9605 NP_852259 15 9605 NP_597676 15 9605 NP_542448 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_150628 15 9605 XP_006724027 15 9605 XP_005254813 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_543146 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_722576 Length = 3080 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLSTTDHTL 9 S STTDHTL Sbjct: 2132 SPSTTDHTL 2140>XP_005262424 Length = 2875 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLSTTDHTL 9 S STTDHTL Sbjct: 1927 SPSTTDHTL 1935>NP_663623 Length = 577 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSTTDHTL 9 +++TT HTL Sbjct: 356 NITTTPHTL 364>NP_001026850 Length = 429 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSTTDH 7 SLSTT H Sbjct: 232 SLSTTSH 238>NP_004341 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSTTDH 7 SLSTT H Sbjct: 218 SLSTTSH 224>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSTTDH 7 SLSTT H Sbjct: 7745 SLSTTSH 7751>NP_001013725 Length = 1649 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SLSTTDHT 8 SLS DHT Sbjct: 205 SLSNQDHT 212>NP_056386 Length = 1112 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLSTTDHT 8 SLS+T HT Sbjct: 898 SLSSTHHT 905>NP_001010854 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSTTDH 7 SLS TDH Sbjct: 509 SLSPTDH 515>XP_005255038 Length = 321 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STTDHTL 9 +T+DHTL Sbjct: 18 TTSDHTL 24>XP_005255037 Length = 347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STTDHTL 9 +T+DHTL Sbjct: 18 TTSDHTL 24>XP_005254450 Length = 1505 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SLSTTDHT 8 SLS DHT Sbjct: 205 SLSNQDHT 212>XP_005254449 Length = 1626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SLSTTDHT 8 SLS DHT Sbjct: 205 SLSNQDHT 212>XP_005267424 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSTTDH 7 SLS TDH Sbjct: 251 SLSPTDH 257>XP_006720122 Length = 820 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSTTDH 7 SLS TDH Sbjct: 415 SLSPTDH 421>XP_006720121 Length = 851 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSTTDH 7 SLS TDH Sbjct: 517 SLSPTDH 523>XP_006716738 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 STTDHTL 9 STT HTL Sbjct: 441 STTPHTL 447>XP_006716737 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 STTDHTL 9 STT HTL Sbjct: 441 STTPHTL 447>XP_005272407 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 STTDHTL 9 STT HTL Sbjct: 441 STTPHTL 447>XP_006716177 Length = 386 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLSTTDHT 8 S STT+HT Sbjct: 222 SPSTTEHT 229>XP_006715520 Length = 1056 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLSTTDHT 8 SLS+T HT Sbjct: 842 SLSSTHHT 849>XP_005246081 Length = 429 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSTTDH 7 SLSTT H Sbjct: 232 SLSTTSH 238>NP_001093879 Length = 1105 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLSTTDHT 8 SLS+T HT Sbjct: 891 SLSSTHHT 898>NP_116291 Length = 528 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 STTDHTL 9 STT HTL Sbjct: 441 STTPHTL 447>NP_060726 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SLSTTDHT 8 SLS T HT Sbjct: 335 SLSLTSHT 342>NP_001138624 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SLSTTDHT 8 S STT HT Sbjct: 155 SSSTTSHT 162>NP_689628 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SLSTTDHT 8 S STT HT Sbjct: 180 SSSTTSHT 187>NP_620063 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSTTDH 7 SLSTT H Sbjct: 56 SLSTTHH 62>NP_055917 Length = 1426 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TTDHTL 9 TT+HTL Sbjct: 976 TTEHTL 981>NP_079079 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 STTDHT 8 STT+HT Sbjct: 200 STTEHT 205>NP_001165335 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 STTDHT 8 STT+HT Sbjct: 160 STTEHT 165>XP_005273458 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SLSTTDHT 8 S STT HT Sbjct: 90 SSSTTSHT 97>XP_005273457 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SLSTTDHT 8 S STT HT Sbjct: 90 SSSTTSHT 97>XP_006716349 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SLSTTDHT 8 S STT HT Sbjct: 180 SSSTTSHT 187>XP_006710633 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TTDHTL 9 TT+HTL Sbjct: 800 TTEHTL 805>XP_006710632 Length = 1389 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TTDHTL 9 TT+HTL Sbjct: 939 TTEHTL 944>XP_006710631 Length = 1412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TTDHTL 9 TT+HTL Sbjct: 962 TTEHTL 967>XP_006710630 Length = 1424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TTDHTL 9 TT+HTL Sbjct: 974 TTEHTL 979>XP_006710629 Length = 1425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TTDHTL 9 TT+HTL Sbjct: 975 TTEHTL 980>XP_006710628 Length = 1426 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TTDHTL 9 TT+HTL Sbjct: 976 TTEHTL 981>XP_006710627 Length = 1426 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TTDHTL 9 TT+HTL Sbjct: 976 TTEHTL 981>XP_006710626 Length = 1426 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TTDHTL 9 TT+HTL Sbjct: 976 TTEHTL 981>NP_001839 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SLSTTDHT 8 S+ TDHT Sbjct: 201 SIIATDHT 208>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSTTDHTL 9 +ST +HTL Sbjct: 19342 ISTDNHTL 19349>NP_000183 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 STTDH 7 STTDH Sbjct: 332 STTDH 336>NP_001136233 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 STTDH 7 STTDH Sbjct: 241 STTDH 245>NP_852259 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 STTDH 7 STTDH Sbjct: 332 STTDH 336>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSTTDHTL 9 +ST +HTL Sbjct: 19467 ISTDNHTL 19474>NP_542448 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 STTDH 7 STTDH Sbjct: 282 STTDH 286>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSTTDHTL 9 +ST +HTL Sbjct: 26766 ISTDNHTL 26773>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSTTDHTL 9 +ST +HTL Sbjct: 25839 ISTDNHTL 25846>NP_150628 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 STTDH 7 STTDH Sbjct: 241 STTDH 245>XP_006724027 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SLSTTDHT 8 S+ TDHT Sbjct: 201 SIIATDHT 208>XP_005254813 Length = 169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 STTDH 7 STTDH Sbjct: 94 STTDH 98>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSTTDHTL 9 +ST +HTL Sbjct: 15079 ISTDNHTL 15086>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSTTDHTL 9 +ST +HTL Sbjct: 16438 ISTDNHTL 16445>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSTTDHTL 9 +ST +HTL Sbjct: 26394 ISTDNHTL 26401>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSTTDHTL 9 +ST +HTL Sbjct: 27900 ISTDNHTL 27907>NP_543146 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LSTTDH 7 LST+DH Sbjct: 41 LSTSDH 46>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSTTDHTL 9 +ST +HTL Sbjct: 28407 ISTDNHTL 28414>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSTTDHTL 9 +ST +HTL Sbjct: 19534 ISTDNHTL 19541Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.111 0.290 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 573,126 Number of extensions: 659 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |