Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 20 390 NP_899662 18 1935 NP_002886 18 1935 XP_006723905 18 1935 NP_005602 17 2528 XP_005256140 17 2528 NP_694962 17 3301 NP_001892 16 5631 NP_075069 16 5631 NP_001162195 16 5631 XP_003960172 16 5631 XP_006718731 16 5631 XP_006718730 16 5631 XP_003119008 16 5631 XP_003119853 16 5631 NP_002652 16 7355 NP_055524 16 7355 NP_001164632 16 7355 NP_001164630 16 7355 NP_001164629 16 7355 NP_001164628 16 7355 NP_005551 16 7355 XP_006723861 16 7355 XP_006723860 16 7355 XP_006723859 16 7355 XP_005259426 16 7355 XP_005247480 16 7355 XP_005247479 16 7355 NP_872416 16 7355 NP_001017415 16 7355 NP_003359 16 7355 NP_001017416 16 7355 NP_115642 15 9605 NP_004786 15 9605 NP_001159716 15 9605 NP_001159718 15 9605 NP_068600 15 9605 NP_001159717 15 9605 NP_114434 15 9605 NP_001034659 15 9605 NP_001633 15 9605 NP_001230228 15 9605 XP_006719958 15 9605 XP_006718000 15 9605 NP_001135748 15 9605 NP_006811 15 9605 NP_001135749 15 9605 NP_001135750 15 9605>NP_000312 Length = 928 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SLSLFYKKM 9 SLSLFYKK+ Sbjct: 646 SLSLFYKKV 654>NP_899662 Length = 1014 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLSLFYKKM 9 SL+LFY+K+ Sbjct: 787 SLALFYRKV 795>NP_002886 Length = 1068 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLSLFYKKM 9 SL+LFY+K+ Sbjct: 787 SLALFYRKV 795>XP_006723905 Length = 896 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLSLFYKKM 9 SL+LFY+K+ Sbjct: 615 SLALFYRKV 623>NP_005602 Length = 1139 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLSLFYKKM 9 SLSLF++K+ Sbjct: 835 SLSLFFRKV 843>XP_005256140 Length = 1065 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLSLFYKKM 9 SLSLF++K+ Sbjct: 761 SLSLFFRKV 769>NP_694962 Length = 442 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SLSLFYKKM 9 SLS F KKM Sbjct: 152 SLSFFLKKM 160>NP_001892 Length = 349 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SLFYKKM 9 SL+Y+KM Sbjct: 338 SLYYRKM 344>NP_075069 Length = 458 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSLFYKK 8 LSLFY K Sbjct: 289 LSLFYNK 295>NP_001162195 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSLFYKK 8 LSLFY K Sbjct: 267 LSLFYNK 273>XP_003960172 Length = 459 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSLFYKKM 9 L L+YKK+ Sbjct: 367 LELYYKKL 374>XP_006718731 Length = 330 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSLFYKK 8 LSLFY K Sbjct: 161 LSLFYNK 167>XP_006718730 Length = 343 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSLFYKK 8 LSLFY K Sbjct: 174 LSLFYNK 180>XP_003119008 Length = 459 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSLFYKKM 9 L L+YKK+ Sbjct: 367 LELYYKKL 374>XP_003119853 Length = 459 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSLFYKKM 9 L L+YKK+ Sbjct: 367 LELYYKKL 374>NP_002652 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LFYKKM 9 LFYKK+ Sbjct: 204 LFYKKL 209>NP_055524 Length = 3546 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LFYKKM 9 LFYK+M Sbjct: 2234 LFYKRM 2239>NP_001164632 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLSLFYKK 8 SLS+ YKK Sbjct: 291 SLSVHYKK 298>NP_001164630 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLSLFYKK 8 SLS+ YKK Sbjct: 381 SLSVHYKK 388>NP_001164629 Length = 554 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLSLFYKK 8 SLS+ YKK Sbjct: 391 SLSVHYKK 398>NP_001164628 Length = 602 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLSLFYKK 8 SLS+ YKK Sbjct: 439 SLSVHYKK 446>NP_005551 Length = 3695 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SLSLFY 6 SLSLFY Sbjct: 1426 SLSLFY 1431>XP_006723861 Length = 2300 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SLSLFY 6 SLSLFY Sbjct: 1426 SLSLFY 1431>XP_006723860 Length = 2586 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SLSLFY 6 SLSLFY Sbjct: 1426 SLSLFY 1431>XP_006723859 Length = 3700 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SLSLFY 6 SLSLFY Sbjct: 1426 SLSLFY 1431>XP_005259426 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLSLFYKK 8 SLS+ YKK Sbjct: 349 SLSVHYKK 356>XP_005247480 Length = 347 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SLFYKK 8 S+FYKK Sbjct: 292 SMFYKK 297>XP_005247479 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SLFYKK 8 S+FYKK Sbjct: 391 SMFYKK 396>NP_872416 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SLFYKK 8 S+FYKK Sbjct: 391 SMFYKK 396>NP_001017415 Length = 785 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LFYKKM 9 LFYKK+ Sbjct: 780 LFYKKL 785>NP_003359 Length = 785 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LFYKKM 9 LFYKK+ Sbjct: 780 LFYKKL 785>NP_001017416 Length = 785 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LFYKKM 9 LFYKK+ Sbjct: 780 LFYKKL 785>NP_115642 Length = 1984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLSLFYKK 8 SLS+FY + Sbjct: 1033 SLSIFYDR 1040>NP_004786 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSLFYKKM 9 S +LFY+K+ Sbjct: 492 SSALFYQKL 500>NP_001159716 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSLFYKKM 9 LSL YK++ Sbjct: 386 LSLLYKRL 393>NP_001159718 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSLFYKKM 9 LSL YK++ Sbjct: 444 LSLLYKRL 451>NP_068600 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSLFYKKM 9 LSL YK++ Sbjct: 444 LSLLYKRL 451>NP_001159717 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSLFYKKM 9 LSL YK++ Sbjct: 332 LSLLYKRL 339>NP_114434 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSLFYKKM 9 S+S+F KK+ Sbjct: 452 SISIFKKKL 460>NP_001034659 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSLFYKKM 9 S+S+F KK+ Sbjct: 435 SISIFKKKL 443>NP_001633 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSLFYK 7 SLSL YK Sbjct: 543 SLSLLYK 549>NP_001230228 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSLFYK 7 SLSL YK Sbjct: 553 SLSLLYK 559>XP_006719958 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSLFYKKM 9 S +LFY+K+ Sbjct: 185 SSALFYQKL 193>XP_006718000 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSLFYKKM 9 LSL YK++ Sbjct: 272 LSLLYKRL 279>NP_001135748 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSLFYK 7 SLSL YK Sbjct: 543 SLSLLYK 549>NP_006811 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSLFYK 7 SLSL YK Sbjct: 23 SLSLLYK 29>NP_001135749 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSLFYK 7 SLSL YK Sbjct: 487 SLSLLYK 493>NP_001135750 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLSLFYK 7 SLSL YK Sbjct: 314 SLSLLYK 320Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.135 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 471,406 Number of extensions: 544 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |