Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 NP_065810 18 1482 XP_006720684 18 1482 NP_061836 17 4312 NP_387505 17 4312 XP_005261051 17 4312 XP_006711599 17 4312 XP_005245543 17 4312 XP_006711598 17 4312 XP_006711597 17 4312 XP_006711596 17 4312 XP_006711595 17 4312 XP_006711594 17 4312 NP_110391 17 4312 NP_076968 16 5631 XP_005254714 16 5631 NP_001098677 16 7355 NP_002281 16 7355 NP_001098676 16 7355 NP_055665 16 7355 NP_001028289 16 7355 NP_065772 16 7355 XP_006724837 16 7355 XP_006715544 16 7355 XP_005267041 16 7355 XP_006715543 16 7355 XP_005267040 16 7355 XP_006713496 16 7355 XP_005265679 16 7355 NP_878918 15 9605 NP_055995 15 9605 NP_115804 15 9605 NP_077307 15 9605 NP_001034288 15 9605 NP_001248768 15 9605 NP_006176 15 9605 NP_001273490 15 9605 XP_006724772 15 9605 XP_005260606 15 9605 XP_006720147 15 9605 XP_005267517 15 9605 XP_005267516 15 9605 XP_005267515 15 9605 XP_005267514 15 9605 XP_005267513 15 9605 XP_005267512 15 9605 XP_005267511 15 9605 XP_006718633 15 9605 XP_006718632 15 9605 XP_006718631 15 9605 XP_006718630 15 9605 XP_006718629 15 9605 XP_006718628 15 9605 XP_006718627 15 9605 XP_006718626 15 9605 XP_006718625 15 9605 XP_006710654 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SLSEQADSL 9 SLSE+ADSL Sbjct: 2376 SLSEEADSL 2384>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SLSEQADSL 9 SLSE+ADSL Sbjct: 2368 SLSEEADSL 2376>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SLSEQADSL 9 SLSE+ADSL Sbjct: 2329 SLSEEADSL 2337>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SLSEQADSL 9 SLSE+ADSL Sbjct: 2408 SLSEEADSL 2416>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SLSEQADSL 9 SLSE+ADSL Sbjct: 2421 SLSEEADSL 2429>NP_065810 Length = 4700 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLSEQADSL 9 S SEQADSL Sbjct: 1313 SYSEQADSL 1321>XP_006720684 Length = 4713 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLSEQADSL 9 S SEQADSL Sbjct: 1326 SYSEQADSL 1334>NP_061836 Length = 2320 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLSEQADS 8 S+SE+ADS Sbjct: 1786 SISEEADS 1793>NP_387505 Length = 2269 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLSEQADS 8 S+SE+ADS Sbjct: 1786 SISEEADS 1793>XP_005261051 Length = 2242 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLSEQADS 8 S+SE+ADS Sbjct: 1708 SISEEADS 1715>XP_006711599 Length = 185 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLSEQADSL 9 +++EQADSL Sbjct: 12 AVTEQADSL 20>XP_005245543 Length = 202 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLSEQADSL 9 +++EQADSL Sbjct: 12 AVTEQADSL 20>XP_006711598 Length = 313 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLSEQADSL 9 +++EQADSL Sbjct: 12 AVTEQADSL 20>XP_006711597 Length = 319 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLSEQADSL 9 +++EQADSL Sbjct: 12 AVTEQADSL 20>XP_006711596 Length = 413 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLSEQADSL 9 +++EQADSL Sbjct: 12 AVTEQADSL 20>XP_006711595 Length = 415 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLSEQADSL 9 +++EQADSL Sbjct: 12 AVTEQADSL 20>XP_006711594 Length = 442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLSEQADSL 9 +++EQADSL Sbjct: 12 AVTEQADSL 20>NP_110391 Length = 508 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLSEQADSL 9 +++EQADSL Sbjct: 12 AVTEQADSL 20>NP_076968 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSEQADSL 9 LSE ADSL Sbjct: 205 LSEAADSL 212>XP_005254714 Length = 448 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSEQADSL 9 LSE ADSL Sbjct: 205 LSEAADSL 212>NP_001098677 Length = 1816 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SLSEQADSL 9 SLS ADSL Sbjct: 526 SLSTSADSL 534>NP_002281 Length = 1816 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SLSEQADSL 9 SLS ADSL Sbjct: 526 SLSTSADSL 534>NP_001098676 Length = 1823 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SLSEQADSL 9 SLS ADSL Sbjct: 533 SLSTSADSL 541>NP_055665 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLSEQADS 8 SLS++ADS Sbjct: 810 SLSQKADS 817>NP_001028289 Length = 1075 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLSEQADS 8 SLS++ADS Sbjct: 786 SLSQKADS 793>NP_065772 Length = 1709 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLSEQADSL 9 SLSE +DSL Sbjct: 144 SLSEISDSL 152>XP_006724837 Length = 1533 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLSEQADSL 9 SLSE +DSL Sbjct: 4 SLSEISDSL 12>XP_006715544 Length = 1810 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SLSEQADSL 9 SLS ADSL Sbjct: 520 SLSTSADSL 528>XP_005267041 Length = 1823 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SLSEQADSL 9 SLS ADSL Sbjct: 533 SLSTSADSL 541>XP_006715543 Length = 1823 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SLSEQADSL 9 SLS ADSL Sbjct: 533 SLSTSADSL 541>XP_005267040 Length = 1823 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SLSEQADSL 9 SLS ADSL Sbjct: 533 SLSTSADSL 541>XP_006713496 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLSEQADS 8 SLS++ADS Sbjct: 302 SLSQKADS 309>XP_005265679 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLSEQADS 8 SLS++ADS Sbjct: 810 SLSQKADS 817>NP_878918 Length = 6907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSEQADSL 9 +L E+ADS+ Sbjct: 2954 ALQEEADSI 2962>NP_055995 Length = 6885 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSEQADSL 9 +L E+ADS+ Sbjct: 2954 ALQEEADSI 2962>NP_115804 Length = 1810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSEQADSL 9 LS+Q DSL Sbjct: 1080 LSQQEDSL 1087>NP_077307 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEQADSL 9 +SE++DSL Sbjct: 1 MSEESDSL 8>NP_001034288 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEQADSL 9 +SE++DSL Sbjct: 1 MSEESDSL 8>NP_001248768 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEQADSL 9 +SE++DSL Sbjct: 1 MSEESDSL 8>NP_006176 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EQADSL 9 EQADSL Sbjct: 1141 EQADSL 1146>NP_001273490 Length = 2101 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EQADSL 9 EQADSL Sbjct: 1141 EQADSL 1146>XP_006724772 Length = 1605 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSEQADSL 9 LS+Q DSL Sbjct: 875 LSQQEDSL 882>XP_005260606 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSEQADSL 9 +SE++DSL Sbjct: 1 MSEESDSL 8>XP_006720147 Length = 4788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSEQADSL 9 +L E+ADS+ Sbjct: 2954 ALQEEADSI 2962>XP_005267517 Length = 6883 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSEQADSL 9 +L E+ADS+ Sbjct: 2954 ALQEEADSI 2962>XP_005267516 Length = 6884 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSEQADSL 9 +L E+ADS+ Sbjct: 2954 ALQEEADSI 2962>XP_005267515 Length = 6899 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSEQADSL 9 +L E+ADS+ Sbjct: 2954 ALQEEADSI 2962>XP_005267514 Length = 6908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSEQADSL 9 +L E+ADS+ Sbjct: 2954 ALQEEADSI 2962>XP_005267513 Length = 6921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSEQADSL 9 +L E+ADS+ Sbjct: 2954 ALQEEADSI 2962>XP_005267512 Length = 6922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSEQADSL 9 +L E+ADS+ Sbjct: 2954 ALQEEADSI 2962>XP_005267511 Length = 6922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLSEQADSL 9 +L E+ADS+ Sbjct: 2954 ALQEEADSI 2962>XP_006718633 Length = 2101 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EQADSL 9 EQADSL Sbjct: 1141 EQADSL 1146>XP_006718632 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EQADSL 9 EQADSL Sbjct: 1141 EQADSL 1146>XP_006718631 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EQADSL 9 EQADSL Sbjct: 1141 EQADSL 1146>XP_006718630 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EQADSL 9 EQADSL Sbjct: 1141 EQADSL 1146>XP_006718629 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EQADSL 9 EQADSL Sbjct: 1141 EQADSL 1146>XP_006718628 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EQADSL 9 EQADSL Sbjct: 1141 EQADSL 1146>XP_006718627 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EQADSL 9 EQADSL Sbjct: 1141 EQADSL 1146>XP_006718626 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EQADSL 9 EQADSL Sbjct: 1141 EQADSL 1146>XP_006718625 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EQADSL 9 EQADSL Sbjct: 1141 EQADSL 1146>XP_006710654 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SEQADS 8 SEQADS Sbjct: 346 SEQADS 351Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.286 0.104 0.223 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 410,610 Number of extensions: 743 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |