Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_689799 18 1482 XP_006717717 18 1482 XP_005269639 18 1482 XP_006717716 18 1482 XP_006717715 18 1482 XP_006717714 18 1482 XP_006717713 18 1482 XP_006717712 18 1482 XP_006717711 18 1482 XP_005269635 18 1482 XP_006717710 18 1482 XP_006717709 18 1482 XP_006717708 18 1482 NP_061923 17 2528 XP_006723678 17 2528 XP_005263134 17 2528 XP_006714303 17 2528 XP_005263133 17 2528 XP_005263132 17 2528 XP_005263131 17 2528 XP_005263130 17 2528 NP_003236 17 2528 NP_001018048 17 4312 NP_056001 17 4312 NP_001018047 17 4312 NP_150648 17 4312 NP_002942 16 5631 XP_006723915 16 5631 XP_006723914 16 5631 XP_005260548 16 5631 XP_006723913 16 5631 XP_006723912 16 5631 XP_005246473 16 5631 XP_005246468 16 5631 XP_005246467 16 5631 XP_005246465 16 5631 XP_005246464 16 5631 XP_005246461 16 5631 XP_005246460 16 5631 XP_005246458 16 5631 XP_005246456 16 5631 XP_005246455 16 5631 XP_005246454 16 5631 NP_060170 16 7355 NP_001229658 16 7355 NP_055864 16 7355 XP_006722363 16 7355 NP_001020471 16 7355 NP_001238965 15 9605 NP_001238966 15 9605 NP_002859 15 9605 NP_001128411 15 9605 NP_001004751 15 9605 NP_996759 15 9605 NP_004785 15 9605 NP_073606 15 9605 NP_001036039 15 9605 XP_005255025 15 9605 XP_005269108 15 9605 XP_005269109 15 9605 XP_006719603 15 9605 NP_004052 15 9605 NP_057262 15 9605 NP_002700 15 9605>NP_689799 Length = 1684 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 SLN+DS+F Sbjct: 582 SLNIDSIF 589>XP_006717717 Length = 859 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 SLN+DS+F Sbjct: 604 SLNIDSIF 611>XP_005269639 Length = 1580 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 SLN+DS+F Sbjct: 525 SLNIDSIF 532>XP_006717716 Length = 1619 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 SLN+DS+F Sbjct: 604 SLNIDSIF 611>XP_006717715 Length = 1660 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 SLN+DS+F Sbjct: 547 SLNIDSIF 554>XP_006717714 Length = 1665 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 SLN+DS+F Sbjct: 604 SLNIDSIF 611>XP_006717713 Length = 1666 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 SLN+DS+F Sbjct: 604 SLNIDSIF 611>XP_006717712 Length = 1670 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 SLN+DS+F Sbjct: 604 SLNIDSIF 611>XP_006717711 Length = 1677 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 SLN+DS+F Sbjct: 604 SLNIDSIF 611>XP_005269635 Length = 1695 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 SLN+DS+F Sbjct: 582 SLNIDSIF 589>XP_006717710 Length = 1706 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 SLN+DS+F Sbjct: 604 SLNIDSIF 611>XP_006717709 Length = 1712 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 SLN+DS+F Sbjct: 604 SLNIDSIF 611>XP_006717708 Length = 1717 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 SLN+DS+F Sbjct: 604 SLNIDSIF 611>NP_061923 Length = 1073 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 +LNVDS+F Sbjct: 590 TLNVDSIF 597>XP_006723678 Length = 718 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LNVDSLFL 9 LNVDS+F+ Sbjct: 164 LNVDSVFM 171>XP_005263134 Length = 800 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 +LNVDS+F Sbjct: 590 TLNVDSIF 597>XP_006714303 Length = 957 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 +LNVDS+F Sbjct: 474 TLNVDSIF 481>XP_005263133 Length = 1022 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 +LNVDS+F Sbjct: 539 TLNVDSIF 546>XP_005263132 Length = 1023 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 +LNVDS+F Sbjct: 540 TLNVDSIF 547>XP_005263131 Length = 1073 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 +LNVDS+F Sbjct: 590 TLNVDSIF 597>XP_005263130 Length = 1073 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLNVDSLF 8 +LNVDS+F Sbjct: 590 TLNVDSIF 597>NP_003236 Length = 693 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LNVDSLFL 9 LNVDS+F+ Sbjct: 139 LNVDSVFM 146>NP_001018048 Length = 3069 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LNVDSLFL 9 +N+DS+F+ Sbjct: 1724 MNIDSIFI 1731>NP_056001 Length = 3095 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LNVDSLFL 9 +N+DS+F+ Sbjct: 1724 MNIDSIFI 1731>NP_001018047 Length = 3135 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LNVDSLFL 9 +N+DS+F+ Sbjct: 1685 MNIDSIFI 1692>NP_150648 Length = 3174 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LNVDSLFL 9 +N+DS+F+ Sbjct: 1724 MNIDSIFI 1731>NP_002942 Length = 631 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NVDSLF 8 NVDSLF Sbjct: 83 NVDSLF 88>XP_006723915 Length = 615 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NVDSLF 8 NVDSLF Sbjct: 83 NVDSLF 88>XP_006723914 Length = 631 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NVDSLF 8 NVDSLF Sbjct: 83 NVDSLF 88>XP_005260548 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NVDSLF 8 NVDSLF Sbjct: 83 NVDSLF 88>XP_006723913 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NVDSLF 8 NVDSLF Sbjct: 83 NVDSLF 88>XP_006723912 Length = 663 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NVDSLF 8 NVDSLF Sbjct: 83 NVDSLF 88>XP_005246473 Length = 2246 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 SL +DSLFL Sbjct: 2227 SLILDSLFL 2235>XP_005246468 Length = 2273 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 SL +DSLFL Sbjct: 2254 SLILDSLFL 2262>XP_005246467 Length = 2337 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 SL +DSLFL Sbjct: 2318 SLILDSLFL 2326>XP_005246465 Length = 2362 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 SL +DSLFL Sbjct: 2343 SLILDSLFL 2351>XP_005246464 Length = 2363 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 SL +DSLFL Sbjct: 2344 SLILDSLFL 2352>XP_005246461 Length = 2392 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 SL +DSLFL Sbjct: 2373 SLILDSLFL 2381>XP_005246460 Length = 2393 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 SL +DSLFL Sbjct: 2374 SLILDSLFL 2382>XP_005246458 Length = 2427 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 SL +DSLFL Sbjct: 2408 SLILDSLFL 2416>XP_005246456 Length = 2452 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 SL +DSLFL Sbjct: 2433 SLILDSLFL 2441>XP_005246455 Length = 2458 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 SL +DSLFL Sbjct: 2439 SLILDSLFL 2447>XP_005246454 Length = 2483 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 SL +DSLFL Sbjct: 2464 SLILDSLFL 2472>NP_060170 Length = 219 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LNVDSLF 8 L+VDSLF Sbjct: 132 LDVDSLF 138>NP_001229658 Length = 777 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LNVDSLF 8 L+VDSLF Sbjct: 132 LDVDSLF 138>NP_055864 Length = 914 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LNVDSLFL 9 L VD+LFL Sbjct: 56 LKVDTLFL 63>XP_006722363 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SLNVDSLFL 9 + NVD +FL Sbjct: 158 NFNVDEIFL 166>NP_001020471 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SLNVDSLFL 9 + NVD +FL Sbjct: 190 NFNVDEIFL 198>NP_001238965 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 ++NV+ LFL Sbjct: 167 AMNVNDLFL 175>NP_001238966 Length = 174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 ++NV+ LFL Sbjct: 126 AMNVNDLFL 134>NP_002859 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 ++NV+ LFL Sbjct: 167 AMNVNDLFL 175>NP_001128411 Length = 190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NVDSLFL 9 NVDS+F+ Sbjct: 128 NVDSVFV 134>NP_001004751 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNVDSLFL 9 + VDSLF+ Sbjct: 220 MGVDSLFI 227>NP_996759 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LNVDSL 7 LNVDSL Sbjct: 6 LNVDSL 11>NP_004785 Length = 237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 S NV+S+F+ Sbjct: 188 SQNVESIFM 196>NP_073606 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLNVDSLF 8 SLNVD+ F Sbjct: 572 SLNVDTPF 579>NP_001036039 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLNVDSLF 8 SLNVD+ F Sbjct: 571 SLNVDTPF 578>XP_005255025 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLNVDSLF 8 SLNVD+ F Sbjct: 571 SLNVDTPF 578>XP_005269108 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 ++NV+ LFL Sbjct: 167 AMNVNDLFL 175>XP_005269109 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 ++NV+ LFL Sbjct: 167 AMNVNDLFL 175>XP_006719603 Length = 250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 ++NV+ LFL Sbjct: 202 AMNVNDLFL 210>NP_004052 Length = 794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLNVDSLFL 9 S NV+++FL Sbjct: 600 SCNVEAIFL 608>NP_057262 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NVDSLFL 9 NVDS+F+ Sbjct: 173 NVDSVFV 179>NP_002700 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LNVDSL 7 LNVDSL Sbjct: 6 LNVDSL 11Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.142 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 446,296 Number of extensions: 725 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |