Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 20 390 NP_004561 20 390 XP_005253450 20 390 XP_006719151 20 390 XP_006710801 18 1935 NP_060681 17 3301 NP_001091982 17 4312 NP_006249 17 4312 XP_005270029 17 4312 XP_005270028 17 4312 XP_005270027 17 4312 NP_001161210 16 5631 NP_065176 16 5631 NP_005566 16 5631 NP_787116 16 5631 NP_078867 16 5631 NP_061187 16 5631 XP_005257725 16 5631 XP_006711674 16 5631 XP_006711673 16 5631 XP_006711672 16 5631 XP_006711671 16 5631 XP_006711670 16 5631 XP_005245629 16 5631 NP_001367 16 7355 NP_689594 16 7355 XP_006712319 16 7355 NP_001186073 16 7355 NP_005484 15 9605 NP_001139753 15 9605 NP_001139751 15 9605 NP_001276045 15 9605 NP_001276042 15 9605 NP_001276043 15 9605 NP_001031 15 9605 NP_001257903 15 9605 NP_620830 15 9605 NP_001185835 15 9605 NP_001185834 15 9605 NP_001185833 15 9605 NP_001185832 15 9605 NP_001185831 15 9605 NP_001185829 15 9605 NP_001185828 15 9605 NP_060212 15 9605 NP_378669 15 9605 NP_060723 15 9605 NP_001185830 15 9605 XP_006722557 15 9605 XP_006722556 15 9605 XP_005256822 15 9605 XP_006721632 15 9605 XP_006721269 15 9605 XP_006715008 15 9605 XP_006711497 15 9605 XP_006711496 15 9605 XP_006711495 15 9605 NP_620829 15 9605 NP_056229 15 9605>NP_001275701 Length = 1486 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SLNKAHQIS 9 SLN+AHQIS Sbjct: 77 SLNEAHQIS 85>NP_004561 Length = 1445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SLNKAHQIS 9 SLN+AHQIS Sbjct: 77 SLNEAHQIS 85>XP_005253450 Length = 1486 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SLNKAHQIS 9 SLN+AHQIS Sbjct: 77 SLNEAHQIS 85>XP_006719151 Length = 1486 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SLNKAHQIS 9 SLN+AHQIS Sbjct: 77 SLNEAHQIS 85>XP_006710801 Length = 647 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LNKAHQ S Sbjct: 348 LNKAHQSS 355>NP_060681 Length = 678 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LNKAHQ 7 LNKAHQ Sbjct: 392 LNKAHQ 397>NP_001091982 Length = 671 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LNKAHQIS 9 LNK H IS Sbjct: 531 LNKGHDIS 538>NP_006249 Length = 686 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LNKAHQIS 9 LNK H IS Sbjct: 546 LNKGHDIS 553>XP_005270029 Length = 403 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LNKAHQIS 9 LNK H IS Sbjct: 263 LNKGHDIS 270>XP_005270028 Length = 591 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LNKAHQIS 9 LNK H IS Sbjct: 451 LNKGHDIS 458>XP_005270027 Length = 665 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LNKAHQIS 9 LNK H IS Sbjct: 546 LNKGHDIS 553>NP_001161210 Length = 1483 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLNKAHQI 8 +LN AHQ+ Sbjct: 934 ALNSAHQL 941>NP_065176 Length = 1877 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLNKAHQI 8 +LN AHQ+ Sbjct: 1328 ALNSAHQL 1335>NP_005566 Length = 1025 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLNKAHQIS 9 SLN +H IS Sbjct: 523 SLNSSHPIS 531>NP_787116 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLNKAHQIS 9 SLN +H IS Sbjct: 509 SLNSSHPIS 517>NP_078867 Length = 201 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LNKAHQI 8 LNK HQ+ Sbjct: 111 LNKMHQV 117>NP_061187 Length = 1133 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SLNKAHQI 8 SLNK H I Sbjct: 585 SLNKQHNI 592>XP_005257725 Length = 245 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LNKAHQI 8 LNK HQ+ Sbjct: 111 LNKMHQV 117>XP_006711674 Length = 1385 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLNKAHQI 8 +LN AHQ+ Sbjct: 836 ALNSAHQL 843>XP_006711673 Length = 1549 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLNKAHQI 8 +LN AHQ+ Sbjct: 1000 ALNSAHQL 1007>XP_006711672 Length = 1557 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLNKAHQI 8 +LN AHQ+ Sbjct: 1008 ALNSAHQL 1015>XP_006711671 Length = 2153 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLNKAHQI 8 +LN AHQ+ Sbjct: 1604 ALNSAHQL 1611>XP_006711670 Length = 2161 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLNKAHQI 8 +LN AHQ+ Sbjct: 1612 ALNSAHQL 1619>XP_005245629 Length = 2164 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLNKAHQI 8 +LN AHQ+ Sbjct: 1615 ALNSAHQL 1622>NP_001367 Length = 4646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LNKAHQ 7 +NKAHQ Sbjct: 765 VNKAHQ 770>NP_689594 Length = 3549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SLNKAHQ 7 S+NK HQ Sbjct: 665 SMNKMHQ 671>XP_006712319 Length = 3308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SLNKAHQ 7 S+NK HQ Sbjct: 424 SMNKMHQ 430>NP_001186073 Length = 3327 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SLNKAHQ 7 S+NK HQ Sbjct: 443 SMNKMHQ 449>NP_005484 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 NKAHQ 7 NKAHQ Sbjct: 520 NKAHQ 524>NP_001139753 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SLNKAHQI 8 +LN++H+I Sbjct: 263 ALNRSHEI 270>NP_001139751 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SLNKAHQI 8 +LN++H+I Sbjct: 360 ALNRSHEI 367>NP_001276045 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SLNKAHQI 8 +LN++H+I Sbjct: 262 ALNRSHEI 269>NP_001276042 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SLNKAHQI 8 +LN++H+I Sbjct: 320 ALNRSHEI 327>NP_001276043 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SLNKAHQI 8 +LN++H+I Sbjct: 320 ALNRSHEI 327>NP_001031 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SLNKAHQI 8 +LN++H+I Sbjct: 378 ALNRSHEI 385>NP_001257903 Length = 5121 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SLNKAH 6 SLNK+H Sbjct: 4085 SLNKSH 4090>NP_620830 Length = 750 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LN+ HQI+ Sbjct: 51 LNEQHQIA 58>NP_001185835 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LN+ HQI+ Sbjct: 117 LNEQHQIA 124>NP_001185834 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LN+ HQI+ Sbjct: 51 LNEQHQIA 58>NP_001185833 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LN+ HQI+ Sbjct: 189 LNEQHQIA 196>NP_001185832 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LN+ HQI+ Sbjct: 189 LNEQHQIA 196>NP_001185831 Length = 750 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LN+ HQI+ Sbjct: 51 LNEQHQIA 58>NP_001185829 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LN+ HQI+ Sbjct: 40 LNEQHQIA 47>NP_001185828 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LN+ HQI+ Sbjct: 40 LNEQHQIA 47>NP_060212 Length = 1178 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LNKAHQ 7 LN+AHQ Sbjct: 1060 LNQAHQ 1065>NP_378669 Length = 105 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LNK H+++ Sbjct: 11 LNKGHKVT 18>NP_060723 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LN+ HQI+ Sbjct: 40 LNEQHQIA 47>NP_001185830 Length = 750 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LN+ HQI+ Sbjct: 51 LNEQHQIA 58>XP_006722557 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LNKAHQ 7 LN+AHQ Sbjct: 958 LNQAHQ 963>XP_006722556 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LNKAHQ 7 LN+AHQ Sbjct: 982 LNQAHQ 987>XP_005256822 Length = 233 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SLNKAHQI 8 +LN++H+I Sbjct: 209 ALNRSHEI 216>XP_006721632 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SLNKAHQI 8 +LN++H+I Sbjct: 324 ALNRSHEI 331>XP_006721269 Length = 5138 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SLNKAH 6 SLNK+H Sbjct: 4102 SLNKSH 4107>XP_006715008 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 NKAHQ 7 NKAHQ Sbjct: 291 NKAHQ 295>XP_006711497 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LN+ HQI+ Sbjct: 51 LNEQHQIA 58>XP_006711496 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LN+ HQI+ Sbjct: 40 LNEQHQIA 47>XP_006711495 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LN+ HQI+ Sbjct: 51 LNEQHQIA 58>NP_620829 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LN+ HQI+ Sbjct: 117 LNEQHQIA 124>NP_056229 Length = 105 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LNKAHQIS 9 LNK H+++ Sbjct: 11 LNKGHKVT 18Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.112 0.282 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 543,056 Number of extensions: 885 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |