Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_085144 17 4312 NP_006682 16 5631 NP_001161444 16 5631 NP_079193 16 5631 NP_001161443 16 5631 NP_001161442 16 5631 NP_061756 16 5631 XP_005262258 16 5631 XP_005262257 16 5631 XP_005262256 16 5631 XP_006724770 16 5631 XP_005262254 16 5631 XP_006724769 16 5631 XP_005262253 16 5631 XP_006724768 16 5631 XP_005262252 16 5631 NP_061993 16 5631 NP_597996 16 5631 NP_065996 16 7355 XP_005270063 16 7355 XP_005270062 16 7355 XP_005270061 16 7355 NP_001073991 15 9605 NP_001127696 15 9605 NP_004810 15 9605 NP_066568 15 9605 NP_001139470 15 9605 NP_803430 15 9605 NP_803429 15 9605 NP_803252 15 9605 NP_001127697 15 9605 NP_004018 15 9605 NP_076435 15 9605 NP_001557 15 9605 XP_005259343 15 9605 XP_005248236 15 9605 XP_005248234 15 9605 XP_006713799 15 9605 XP_005247779 15 9605 XP_006712572 15 9605 XP_006712571 15 9605 XP_006712570 15 9605 XP_006712569 15 9605 XP_006712568 15 9605 XP_006712567 15 9605 XP_006712566 15 9605 XP_006712565 15 9605 XP_006712564 15 9605 XP_006712563 15 9605 XP_006712562 15 9605>NP_085144 Length = 343 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SLLGLSLA 8 SLLGL+LA Sbjct: 92 SLLGLALA 99>NP_006682 Length = 322 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 LLGLSLA Sbjct: 63 LLGLSLA 69>NP_001161444 Length = 504 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLGLSLAQ 9 ++GLSLAQ Sbjct: 357 VIGLSLAQ 364>NP_079193 Length = 504 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLGLSLAQ 9 ++GLSLAQ Sbjct: 357 VIGLSLAQ 364>NP_001161443 Length = 459 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLGLSLAQ 9 ++GLSLAQ Sbjct: 312 VIGLSLAQ 319>NP_001161442 Length = 504 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLGLSLAQ 9 ++GLSLAQ Sbjct: 357 VIGLSLAQ 364>NP_061756 Length = 798 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 LLGLSLA Sbjct: 20 LLGLSLA 26>XP_005262258 Length = 265 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLGLSLAQ 9 ++GLSLAQ Sbjct: 118 VIGLSLAQ 125>XP_005262257 Length = 385 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLGLSLAQ 9 ++GLSLAQ Sbjct: 238 VIGLSLAQ 245>XP_005262256 Length = 447 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLGLSLAQ 9 ++GLSLAQ Sbjct: 300 VIGLSLAQ 307>XP_006724770 Length = 459 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLGLSLAQ 9 ++GLSLAQ Sbjct: 312 VIGLSLAQ 319>XP_005262254 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLGLSLAQ 9 ++GLSLAQ Sbjct: 357 VIGLSLAQ 364>XP_006724769 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLGLSLAQ 9 ++GLSLAQ Sbjct: 357 VIGLSLAQ 364>XP_005262253 Length = 504 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLGLSLAQ 9 ++GLSLAQ Sbjct: 357 VIGLSLAQ 364>XP_006724768 Length = 504 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLGLSLAQ 9 ++GLSLAQ Sbjct: 357 VIGLSLAQ 364>XP_005262252 Length = 504 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLGLSLAQ 9 ++GLSLAQ Sbjct: 357 VIGLSLAQ 364>NP_061993 Length = 801 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 LLGLSLA Sbjct: 20 LLGLSLA 26>NP_597996 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SLLGLSL 7 SLLGLSL Sbjct: 168 SLLGLSL 174>NP_065996 Length = 3184 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLGLSLAQ 9 LLGL LAQ Sbjct: 509 LLGLLLAQ 516>XP_005270063 Length = 2005 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLGLSLAQ 9 LLGL LAQ Sbjct: 509 LLGLLLAQ 516>XP_005270062 Length = 3184 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLGLSLAQ 9 LLGL LAQ Sbjct: 509 LLGLLLAQ 516>XP_005270061 Length = 3184 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLGLSLAQ 9 LLGL LAQ Sbjct: 509 LLGLLLAQ 516>NP_001073991 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLLGLSL 7 S+LGLSL Sbjct: 1005 SILGLSL 1011>NP_001127696 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35>NP_004810 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLGLSLAQ 9 L+GL LAQ Sbjct: 1138 LIGLRLAQ 1145>NP_066568 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLLGLSL 7 SL+GLSL Sbjct: 146 SLIGLSL 152>NP_001139470 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLLGLSL 7 SL+GLSL Sbjct: 115 SLIGLSL 121>NP_803430 Length = 116 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLGLSLAQ 9 L+GL LAQ Sbjct: 12 LMGLPLAQ 19>NP_803429 Length = 116 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLGLSLAQ 9 L+GL LAQ Sbjct: 12 LMGLPLAQ 19>NP_803252 Length = 116 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLGLSLAQ 9 L+GL LAQ Sbjct: 12 LMGLPLAQ 19>NP_001127697 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35>NP_004018 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35>NP_076435 Length = 131 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLGLSLAQ 9 L+GL LAQ Sbjct: 12 LMGLPLAQ 19>NP_001557 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35>XP_005259343 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLGLSLAQ 9 L+GL LAQ Sbjct: 1138 LIGLRLAQ 1145>XP_005248236 Length = 1262 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLLGLSL 7 S+LGLSL Sbjct: 1005 SILGLSL 1011>XP_005248234 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLLGLSL 7 S+LGLSL Sbjct: 1005 SILGLSL 1011>XP_006713799 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLLGLSL 7 SL+GLSL Sbjct: 146 SLIGLSL 152>XP_005247779 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLLGLSL 7 SL+GLSL Sbjct: 146 SLIGLSL 152>XP_006712572 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35>XP_006712571 Length = 935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35>XP_006712570 Length = 939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35>XP_006712569 Length = 944 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35>XP_006712568 Length = 946 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35>XP_006712567 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35>XP_006712566 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35>XP_006712565 Length = 983 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35>XP_006712564 Length = 988 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35>XP_006712563 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35>XP_006712562 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLGLSLA 8 +LGLSLA Sbjct: 29 MLGLSLA 35Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.133 0.314 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 397,369 Number of extensions: 549 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |