Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_038476 17 2528 NP_872589 17 2528 NP_776159 17 4312 NP_005575 16 5631 NP_079089 16 5631 XP_005271280 16 5631 XP_006710968 16 5631 NP_001229342 16 7355 NP_006248 16 7355 NP_001269574 16 7355 NP_001269573 16 7355 NP_997719 16 7355 XP_005252554 16 7355 XP_006717528 16 7355 XP_005252553 16 7355 NP_775831 15 9605 NP_892006 15 9605 NP_149062 15 9605 NP_001273387 15 9605 NP_853559 15 9605 NP_071375 15 9605 NP_001257348 15 9605 NP_065385 15 9605 NP_003461 15 9605 NP_001273386 15 9605 XP_005255529 15 9605 XP_005255527 15 9605 XP_005255528 15 9605 XP_005255185 15 9605 XP_006715908 15 9605 XP_006715907 15 9605 XP_005250182 15 9605 XP_006715488 15 9605 XP_006715487 15 9605 XP_006715486 15 9605 XP_006715485 15 9605 XP_006715484 15 9605 XP_006715483 15 9605 XP_006715482 15 9605 XP_006715481 15 9605 XP_006715480 15 9605 XP_006715479 15 9605 XP_006715478 15 9605 XP_006715477 15 9605 XP_006715476 15 9605 XP_006715475 15 9605 XP_006715474 15 9605 XP_006715473 15 9605 XP_006715472 15 9605 XP_006715471 15 9605 XP_006715470 15 9605 NP_653275 15 9605>NP_038476 Length = 1556 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LKLRIRDF 9 L+LR+RDF Sbjct: 975 LELRLRDF 982>NP_872589 Length = 1524 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LKLRIRDF 9 L+LR+RDF Sbjct: 943 LELRLRDF 950>NP_776159 Length = 402 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LKLRIRDF 9 L+LR++DF Sbjct: 188 LRLRLKDF 195>NP_005575 Length = 359 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LKLRIRD 8 +KLRIRD Sbjct: 158 VKLRIRD 164>NP_079089 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKLRIRDF 9 L LRIR+F Sbjct: 459 LNLRIREF 466>XP_005271280 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKLRIRDF 9 L LRIR+F Sbjct: 459 LNLRIREF 466>XP_006710968 Length = 579 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKLRIRDF 9 L LRIR+F Sbjct: 459 LNLRIREF 466>NP_001229342 Length = 643 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKLRIRDF 9 +KL+I DF Sbjct: 373 IKLKIEDF 380>NP_006248 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKLRIRDF 9 +KL+I DF Sbjct: 373 IKLKIEDF 380>NP_001269574 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKLRIRDF 9 +KL+I DF Sbjct: 248 IKLKIEDF 255>NP_001269573 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKLRIRDF 9 +KL+I DF Sbjct: 337 IKLKIEDF 344>NP_997719 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SLKLRIRDF 9 ++KL++ DF Sbjct: 129 NIKLKVEDF 137>XP_005252554 Length = 697 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKLRIRDF 9 +KL+I DF Sbjct: 407 IKLKIEDF 414>XP_006717528 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKLRIRDF 9 +KL+I DF Sbjct: 373 IKLKIEDF 380>XP_005252553 Length = 740 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKLRIRDF 9 +KL+I DF Sbjct: 407 IKLKIEDF 414>NP_775831 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLKLRIRDF 9 SLK R +DF Sbjct: 487 SLKKRAQDF 495>NP_892006 Length = 8797 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3170 NLKIQMKDF 3178>NP_149062 Length = 8749 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3177 NLKIQMKDF 3185>NP_001273387 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKLRIRDF 9 LK++I DF Sbjct: 782 LKMKITDF 789>NP_853559 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLKLRIRD 8 S+K+RI D Sbjct: 156 SIKIRIHD 163>NP_071375 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LKLRIRD 8 L+LR+RD Sbjct: 657 LRLRLRD 663>NP_001257348 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLKLRIRD 8 S+K+RI D Sbjct: 156 SIKIRIHD 163>NP_065385 Length = 731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLRIRDF 9 +LR RDF Sbjct: 653 RLRFRDF 659>NP_003461 Length = 1102 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKLRIRDF 9 LK++I DF Sbjct: 881 LKMKITDF 888>NP_001273386 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKLRIRDF 9 LK++I DF Sbjct: 865 LKMKITDF 872>XP_005255529 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LKLRIRD 8 L+LR+RD Sbjct: 239 LRLRLRD 245>XP_005255527 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LKLRIRD 8 L+LR+RD Sbjct: 541 LRLRLRD 547>XP_005255528 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LKLRIRD 8 L+LR+RD Sbjct: 685 LRLRLRD 691>XP_005255185 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SLKLRIRD 8 +LKLR+R+ Sbjct: 201 TLKLRLRE 208>XP_006715908 Length = 237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLKLRIRD 8 S+K+RI D Sbjct: 76 SIKIRIHD 83>XP_006715907 Length = 237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLKLRIRD 8 S+K+RI D Sbjct: 76 SIKIRIHD 83>XP_005250182 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLKLRIRD 8 S+K+RI D Sbjct: 156 SIKIRIHD 163>XP_006715488 Length = 8721 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3177 NLKIQMKDF 3185>XP_006715487 Length = 8744 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3177 NLKIQMKDF 3185>XP_006715486 Length = 8758 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3177 NLKIQMKDF 3185>XP_006715485 Length = 8793 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3124 NLKIQMKDF 3132>XP_006715484 Length = 8794 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3177 NLKIQMKDF 3185>XP_006715483 Length = 8795 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3177 NLKIQMKDF 3185>XP_006715482 Length = 8797 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3170 NLKIQMKDF 3178>XP_006715481 Length = 8799 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3130 NLKIQMKDF 3138>XP_006715480 Length = 8799 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3177 NLKIQMKDF 3185>XP_006715479 Length = 8804 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3177 NLKIQMKDF 3185>XP_006715478 Length = 8809 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3177 NLKIQMKDF 3185>XP_006715477 Length = 8822 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3153 NLKIQMKDF 3161>XP_006715476 Length = 8823 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3177 NLKIQMKDF 3185>XP_006715475 Length = 8827 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3177 NLKIQMKDF 3185>XP_006715474 Length = 8829 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3160 NLKIQMKDF 3168>XP_006715473 Length = 8832 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3177 NLKIQMKDF 3185>XP_006715472 Length = 8839 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3170 NLKIQMKDF 3178>XP_006715471 Length = 8842 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3177 NLKIQMKDF 3185>XP_006715470 Length = 8846 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SLKLRIRDF 9 +LK++++DF Sbjct: 3177 NLKIQMKDF 3185>NP_653275 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SLKLRIRD 8 +LKLR+R+ Sbjct: 428 TLKLRLRE 435Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.343 0.157 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 429,840 Number of extensions: 784 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |