Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_009046 17 2528 NP_001004488 17 2528 NP_001139241 17 4312 NP_004619 17 4312 NP_003030 16 5631 NP_064707 16 5631 XP_005246155 16 5631 XP_006712703 16 5631 XP_005246154 16 5631 XP_006710899 16 5631 XP_005263548 16 5631 NP_005250 16 7355 NP_001005182 16 7355 NP_079235 16 7355 NP_003599 16 7355 XP_006719671 16 7355 NP_001005185 16 7355 NP_795713 16 7355 NP_036196 15 9605 NP_001185791 15 9605 NP_060722 15 9605 NP_001010986 15 9605 NP_775965 15 9605 NP_697018 15 9605 NP_006802 15 9605 NP_001258138 15 9605 NP_945179 15 9605 NP_076979 15 9605 NP_695021 15 9605 XP_006724816 15 9605 XP_006724815 15 9605 XP_006724814 15 9605 XP_005262462 15 9605 XP_005271350 15 9605>NP_009046 Length = 277 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 LIY+FLL+ Sbjct: 4 LIYLFLLL 11>NP_001004488 Length = 310 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLIYIFLLI 9 SL YIF+L+ Sbjct: 31 SLFYIFILL 39>NP_001139241 Length = 903 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 L++IFLLI Sbjct: 261 LVHIFLLI 268>NP_004619 Length = 940 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 L++IFLLI Sbjct: 298 LVHIFLLI 305>NP_003030 Length = 501 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IYIFLLI 9 IYIFL++ Sbjct: 454 IYIFLIV 460>NP_064707 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SLIYIFLLI 9 S IYIF+ + Sbjct: 48 SFIYIFIFV 56>XP_005246155 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SLIYIFLLI 9 S IYIF+ + Sbjct: 48 SFIYIFIFV 56>XP_006712703 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SLIYIFLLI 9 S IYIF+ + Sbjct: 48 SFIYIFIFV 56>XP_005246154 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SLIYIFLLI 9 S IYIF+ + Sbjct: 48 SFIYIFIFV 56>XP_006710899 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IYIFLLI 9 IYIFL++ Sbjct: 444 IYIFLIV 450>XP_005263548 Length = 501 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IYIFLLI 9 IYIFL++ Sbjct: 454 IYIFLIV 460>NP_005250 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IYIFLLI 9 IY+F+LI Sbjct: 10 IYLFMLI 16>NP_001005182 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 +I++FLLI Sbjct: 24 VIFVFLLI 31>NP_079235 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 L+Y+FL++ Sbjct: 107 LLYLFLIL 114>NP_003599 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 ++YIF++I Sbjct: 19 IVYIFVII 26>XP_006719671 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 L+Y+FL++ Sbjct: 107 LLYLFLIL 114>NP_001005185 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IYIFLLI 9 IY+FLL+ Sbjct: 25 IYLFLLL 31>NP_795713 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LIYIFL 7 LIYIFL Sbjct: 315 LIYIFL 320>NP_036196 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLIYIFLL 8 SL+Y FLL Sbjct: 216 SLLYDFLL 223>NP_001185791 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 LI+I+LL+ Sbjct: 131 LIFIYLLL 138>NP_060722 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 LI+I+LL+ Sbjct: 70 LIFIYLLL 77>NP_001010986 Length = 1119 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 ++Y+F+L+ Sbjct: 296 IVYLFILL 303>NP_775965 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 ++Y+F+L+ Sbjct: 296 IVYLFILL 303>NP_697018 Length = 88 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIYIFLLI 9 L+Y+FL I Sbjct: 3 LLYLFLAI 10>NP_006802 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIYIFLLI 9 LIY F+L+ Sbjct: 40 LIYAFILL 47>NP_001258138 Length = 87 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIYIFLLI 9 L+Y+FL I Sbjct: 3 LLYLFLAI 10>NP_945179 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIYIFLLI 9 LIY F+L+ Sbjct: 40 LIYAFILL 47>NP_076979 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLIYIFLL 8 SLI+IF L Sbjct: 211 SLIFIFTL 218>NP_695021 Length = 84 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIYIFLLI 9 L+Y+FL I Sbjct: 3 LLYLFLAI 10>XP_006724816 Length = 1105 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 ++Y+F+L+ Sbjct: 293 IVYLFILL 300>XP_006724815 Length = 1105 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 ++Y+F+L+ Sbjct: 293 IVYLFILL 300>XP_006724814 Length = 1116 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 ++Y+F+L+ Sbjct: 293 IVYLFILL 300>XP_005262462 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 LIYIFLLI 9 ++Y+F+L+ Sbjct: 293 IVYLFILL 300>XP_005271350 Length = 1854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LIYIFL 7 L+YIFL Sbjct: 1830 LVYIFL 1835Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.357 0.178 0.481 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 382,889 Number of extensions: 801 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |