Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004904 17 2528 XP_005256388 17 2528 XP_005256387 17 2528 XP_006721413 17 2528 XP_005256386 17 2528 NP_001137499 17 4312 NP_055249 17 4312 NP_001137498 17 4312 XP_006717120 17 4312 XP_006717119 17 4312 XP_005266123 17 4312 NP_001166146 16 5631 NP_001166145 16 5631 NP_115973 16 5631 XP_005259393 16 5631 XP_005259392 16 5631 XP_006723494 16 5631 XP_006723493 16 5631 XP_006723482 16 5631 XP_005259380 16 5631 XP_005259381 16 5631 XP_005259373 16 5631 XP_006723481 16 5631 XP_006723480 16 5631 NP_115799 16 5631 NP_001096121 16 7355 XP_006722698 16 7355 XP_006722697 16 7355 NP_001172048 15 9605 NP_001172047 15 9605 NP_061127 15 9605 NP_079316 15 9605 XP_005258464 15 9605 XP_005255923 15 9605 XP_005247681 15 9605 XP_005247679 15 9605 XP_005247678 15 9605 NP_005764 15 9605 NP_056066 15 9605>NP_004904 Length = 631 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLISSLVTH 9 SL++SLV+H Sbjct: 267 SLVTSLVSH 275>XP_005256388 Length = 466 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLISSLVTH 9 SL++SLV+H Sbjct: 101 SLVTSLVSH 109>XP_005256387 Length = 562 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLISSLVTH 9 SL++SLV+H Sbjct: 197 SLVTSLVSH 205>XP_006721413 Length = 597 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLISSLVTH 9 SL++SLV+H Sbjct: 267 SLVTSLVSH 275>XP_005256386 Length = 632 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SLISSLVTH 9 SL++SLV+H Sbjct: 267 SLVTSLVSH 275>NP_001137499 Length = 521 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLISSLVTH 9 S+ SSL+TH Sbjct: 351 SIASSLLTH 359>NP_055249 Length = 597 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLISSLVTH 9 S+ SSL+TH Sbjct: 385 SIASSLLTH 393>NP_001137498 Length = 606 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLISSLVTH 9 S+ SSL+TH Sbjct: 385 SIASSLLTH 393>XP_006717120 Length = 555 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLISSLVTH 9 S+ SSL+TH Sbjct: 334 SIASSLLTH 342>XP_006717119 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLISSLVTH 9 S+ SSL+TH Sbjct: 403 SIASSLLTH 411>XP_005266123 Length = 624 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLISSLVTH 9 S+ SSL+TH Sbjct: 403 SIASSLLTH 411>NP_001166146 Length = 840 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 S+ SSL TH Sbjct: 801 SICSSLTTH 809Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 S+ SSL TH Sbjct: 552 SVYSSLTTH 560>NP_001166145 Length = 840 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 S+ SSL TH Sbjct: 801 SICSSLTTH 809Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 S+ SSL TH Sbjct: 552 SVYSSLTTH 560>NP_115973 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 S+ SSL TH Sbjct: 800 SICSSLTTH 808Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 S+ SSL TH Sbjct: 551 SVYSSLTTH 559>XP_005259393 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 S+ SSL TH Sbjct: 742 SICSSLTTH 750Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 S+ SSL TH Sbjct: 493 SVYSSLTTH 501>XP_005259392 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 S+ SSL TH Sbjct: 800 SICSSLTTH 808Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 S+ SSL TH Sbjct: 551 SVYSSLTTH 559>XP_006723494 Length = 840 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 S+ SSL TH Sbjct: 801 SICSSLTTH 809Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 S+ SSL TH Sbjct: 552 SVYSSLTTH 560>XP_006723493 Length = 840 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 S+ SSL TH Sbjct: 801 SICSSLTTH 809Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 S+ SSL TH Sbjct: 552 SVYSSLTTH 560>XP_006723482 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLISSLVTH 9 S+ SSL+TH Sbjct: 130 SVRSSLITH 138>XP_005259380 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLISSLVTH 9 S+ SSL+TH Sbjct: 301 SVRSSLITH 309>XP_005259381 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLISSLVTH 9 S+ SSL+TH Sbjct: 301 SVRSSLITH 309>XP_005259373 Length = 664 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLISSLVTH 9 S+ SSL+TH Sbjct: 399 SVRSSLITH 407>XP_006723481 Length = 712 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLISSLVTH 9 S+ SSL+TH Sbjct: 447 SVRSSLITH 455>XP_006723480 Length = 748 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLISSLVTH 9 S+ SSL+TH Sbjct: 483 SVRSSLITH 491>NP_115799 Length = 628 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLISSLVTH 9 S+ SSL+TH Sbjct: 363 SVRSSLITH 371>NP_001096121 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSLVTH Sbjct: 505 SSLVTH 510>XP_006722698 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSLVTH Sbjct: 355 SSLVTH 360>XP_006722697 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSLVTH Sbjct: 504 SSLVTH 509>NP_001172048 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSL+TH Sbjct: 456 SSLITH 461>NP_001172047 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSL+TH Sbjct: 456 SSLITH 461>NP_061127 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSL+TH Sbjct: 456 SSLITH 461>NP_079316 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSL+TH Sbjct: 272 SSLITH 277>XP_005258464 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSL+TH Sbjct: 127 SSLITH 132Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSL+TH Sbjct: 183 SSLITH 188Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSL+TH Sbjct: 211 SSLITH 216>XP_005255923 Length = 667 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 SL++ VTH Sbjct: 380 SLVAETVTH 388>XP_005247681 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSL+TH Sbjct: 342 SSLITH 347>XP_005247679 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSL+TH Sbjct: 374 SSLITH 379>XP_005247678 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSL+TH Sbjct: 456 SSLITH 461>NP_005764 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSL+TH Sbjct: 280 SSLITH 285Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSL+TH Sbjct: 336 SSLITH 341Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSLVTH 9 SSL+TH Sbjct: 364 SSLITH 369>NP_056066 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SLISSLVTH 9 SL++ VTH Sbjct: 536 SLVAETVTH 544Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.122 0.298 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 336,602 Number of extensions: 1074 Number of successful extensions: 50 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |