Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 19 869 NP_009297 19 869 NP_071349 17 4312 NP_006717 17 4312 NP_001186211 17 4312 XP_005257625 17 4312 XP_005257624 17 4312 XP_005263434 17 4312 XP_005263433 17 4312 XP_005263432 17 4312 XP_005263431 17 4312 XP_006714492 17 4312 XP_005263430 17 4312 XP_005263429 17 4312 XP_005271879 16 7355 NP_001264044 15 9605 NP_001191827 15 9605 NP_612470 15 9605 NP_001035700 15 9605 NP_078856 15 9605 NP_005848 15 9605>NP_005148 Length = 1130 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SLFSALIKK 9 +LFSALIKK Sbjct: 598 NLFSALIKK 606>NP_009297 Length = 1149 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SLFSALIKK 9 +LFSALIKK Sbjct: 617 NLFSALIKK 625>NP_071349 Length = 1292 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LFSALIK 8 LFSALIK Sbjct: 984 LFSALIK 990>NP_006717 Length = 2863 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SLFSALIKK 9 S+F+A++KK Sbjct: 112 SMFTAILKK 120>NP_001186211 Length = 2851 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SLFSALIKK 9 S+F+A++KK Sbjct: 112 SMFTAILKK 120>XP_005257625 Length = 1268 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LFSALIK 8 LFSALIK Sbjct: 960 LFSALIK 966>XP_005257624 Length = 1293 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LFSALIK 8 LFSALIK Sbjct: 985 LFSALIK 991>XP_005263434 Length = 1557 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SLFSALIKK 9 S+F+A++KK Sbjct: 112 SMFTAILKK 120>XP_005263433 Length = 2832 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SLFSALIKK 9 S+F+A++KK Sbjct: 112 SMFTAILKK 120>XP_005263432 Length = 2852 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SLFSALIKK 9 S+F+A++KK Sbjct: 112 SMFTAILKK 120>XP_005263431 Length = 2857 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SLFSALIKK 9 S+F+A++KK Sbjct: 112 SMFTAILKK 120>XP_006714492 Length = 2867 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SLFSALIKK 9 S+F+A++KK Sbjct: 112 SMFTAILKK 120>XP_005263430 Length = 2868 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SLFSALIKK 9 S+F+A++KK Sbjct: 112 SMFTAILKK 120>XP_005263429 Length = 2868 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SLFSALIKK 9 S+F+A++KK Sbjct: 112 SMFTAILKK 120>XP_005271879 Length = 277 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLFSALI 7 SLFSAL+ Sbjct: 10 SLFSALV 16>NP_001264044 Length = 4516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLFSALIKK 9 SLF L+KK Sbjct: 3079 SLFKNLLKK 3087>NP_001191827 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLFSALI 7 SLFSAL+ Sbjct: 149 SLFSALL 155>NP_612470 Length = 209 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLFSALI 7 SLFSAL+ Sbjct: 175 SLFSALL 181>NP_001035700 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLFSALIKK 9 SL+ A++KK Sbjct: 252 SLYDAVLKK 260>NP_078856 Length = 1120 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLFSALIKK 9 SL+ A++KK Sbjct: 303 SLYDAVLKK 311>NP_005848 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LFSALIK 8 L+SALIK Sbjct: 431 LYSALIK 437Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.135 0.319 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 345,008 Number of extensions: 603 Number of successful extensions: 21 Number of sequences better than 10000.0: 21 Number of HSP's gapped: 21 Number of HSP's successfully gapped: 21 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |