Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008980 18 1135 NP_510961 18 1135 NP_001184169 18 1135 NP_001184167 18 1135 NP_001184166 18 1135 NP_001184163 18 1135 NP_008926 18 1135 XP_006715018 18 1135 XP_006715016 18 1135 XP_005248854 18 1135 NP_003290 18 1482 NP_008835 17 2528 NP_001075109 17 2528 XP_005245669 17 3301 NP_612400 17 3301 NP_001073277 17 3301 NP_001171985 17 4312 NP_001103132 17 4312 NP_005593 17 4312 NP_853509 16 5631 NP_001184168 16 5631 NP_001002010 16 5631 XP_005248855 16 5631 NP_001269287 16 7355 NP_078894 16 7355 NP_001269072 16 7355 NP_001269073 16 7355 NP_001035059 16 7355 NP_001265168 16 7355 NP_001265165 16 7355 NP_116170 16 7355 NP_008837 16 7355 NP_001265167 16 7355 XP_005271729 16 7355 XP_005271727 16 7355 XP_005271728 16 7355 XP_006718967 16 7355 XP_005271726 16 7355 NP_976321 15 9605 NP_976322 15 9605 NP_976323 15 9605 NP_976320 15 9605 NP_976319 15 9605 NP_002930 15 9605 NP_976318 15 9605 NP_976317 15 9605 NP_003703 15 9605 XP_006716148 15 9605>NP_008980 Length = 527 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SLCALVASQ 9 SLCALV++Q Sbjct: 21 SLCALVSAQ 29>NP_510961 Length = 334 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SLCALVASQ 9 SLCALV++Q Sbjct: 21 SLCALVSAQ 29>NP_001184169 Length = 256 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SLCALVASQ 9 SLCALV++Q Sbjct: 25 SLCALVSAQ 33>NP_001184167 Length = 336 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SLCALVASQ 9 SLCALV++Q Sbjct: 25 SLCALVSAQ 33>NP_001184166 Length = 523 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SLCALVASQ 9 SLCALV++Q Sbjct: 25 SLCALVSAQ 33>NP_001184163 Length = 330 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SLCALVASQ 9 SLCALV++Q Sbjct: 21 SLCALVSAQ 29>NP_008926 Length = 523 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SLCALVASQ 9 SLCALV++Q Sbjct: 25 SLCALVSAQ 33>XP_006715018 Length = 353 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SLCALVASQ 9 SLCALV++Q Sbjct: 25 SLCALVSAQ 33>XP_006715016 Length = 523 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SLCALVASQ 9 SLCALV++Q Sbjct: 25 SLCALVSAQ 33>XP_005248854 Length = 523 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SLCALVASQ 9 SLCALV++Q Sbjct: 25 SLCALVSAQ 33>NP_003290 Length = 803 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLCALVASQ 9 S CALVASQ Sbjct: 643 SPCALVASQ 651>NP_008835 Length = 4128 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SLCALVASQ 9 SLC LVA Q Sbjct: 2340 SLCELVAKQ 2348>NP_001075109 Length = 4097 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SLCALVASQ 9 SLC LVA Q Sbjct: 2340 SLCELVAKQ 2348>XP_005245669 Length = 375 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SLCALVASQ 9 SLC L ASQ Sbjct: 69 SLCGLEASQ 77>NP_612400 Length = 376 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SLCALVASQ 9 SLC L ASQ Sbjct: 69 SLCGLEASQ 77>NP_001073277 Length = 376 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SLCALVASQ 9 SLC L ASQ Sbjct: 69 SLCGLEASQ 77>NP_001171985 Length = 123 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLCALVAS 8 +LCALVA+ Sbjct: 47 ALCALVAT 54>NP_001103132 Length = 4284 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SLCALVASQ 9 +LCA +ASQ Sbjct: 4053 ALCAEIASQ 4061>NP_005593 Length = 207 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLCALVAS 8 +LCALVA+ Sbjct: 131 ALCALVAT 138>NP_853509 Length = 407 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLCALVA 7 SLCALV+ Sbjct: 25 SLCALVS 31>NP_001184168 Length = 313 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLCALVA 7 SLCALV+ Sbjct: 25 SLCALVS 31>NP_001002010 Length = 336 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLCALVA 7 S+CALVA Sbjct: 21 SVCALVA 27>XP_005248855 Length = 407 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLCALVA 7 SLCALV+ Sbjct: 25 SLCALVS 31>NP_001269287 Length = 975 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLCALVASQ 9 SLC LVA + Sbjct: 211 SLCQLVAQR 219>NP_078894 Length = 975 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLCALVASQ 9 SLC LVA + Sbjct: 211 SLCQLVAQR 219>NP_001269072 Length = 975 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLCALVASQ 9 SLC LVA + Sbjct: 211 SLCQLVAQR 219>NP_001269073 Length = 975 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLCALVASQ 9 SLC LVA + Sbjct: 211 SLCQLVAQR 219>NP_001035059 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLCALVASQ 9 SLC ASQ Sbjct: 87 SLCLFAASQ 95>NP_001265168 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLCALVASQ 9 SLC ASQ Sbjct: 63 SLCLFAASQ 71>NP_001265165 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLCALVASQ 9 SLC ASQ Sbjct: 87 SLCLFAASQ 95>NP_116170 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLCALVASQ 9 SLC ASQ Sbjct: 87 SLCLFAASQ 95>NP_008837 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLCALVASQ 9 SLC ASQ Sbjct: 87 SLCLFAASQ 95>NP_001265167 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLCALVASQ 9 SLC ASQ Sbjct: 63 SLCLFAASQ 71>XP_005271729 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLCALVASQ 9 SLC LVA + Sbjct: 33 SLCQLVAQR 41>XP_005271727 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLCALVASQ 9 SLC LVA + Sbjct: 33 SLCQLVAQR 41>XP_005271728 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLCALVASQ 9 SLC LVA + Sbjct: 33 SLCQLVAQR 41>XP_006718967 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLCALVASQ 9 SLC LVA + Sbjct: 211 SLCQLVAQR 219>XP_005271726 Length = 975 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SLCALVASQ 9 SLC LVA + Sbjct: 211 SLCQLVAQR 219>NP_976321 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCALVASQ 9 LC +VAS+ Sbjct: 219 LCGIVASK 226>NP_976322 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCALVASQ 9 LC +VAS+ Sbjct: 219 LCGIVASK 226>NP_976323 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCALVASQ 9 LC +VAS+ Sbjct: 219 LCGIVASK 226>NP_976320 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCALVASQ 9 LC +VAS+ Sbjct: 219 LCGIVASK 226>NP_976319 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCALVASQ 9 LC +VAS+ Sbjct: 219 LCGIVASK 226>NP_002930 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCALVASQ 9 LC +VAS+ Sbjct: 219 LCGIVASK 226>NP_976318 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCALVASQ 9 LC +VAS+ Sbjct: 219 LCGIVASK 226>NP_976317 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LCALVASQ 9 LC +VAS+ Sbjct: 219 LCGIVASK 226>NP_003703 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LCALVAS 8 LC LVAS Sbjct: 13 LCLLVAS 19>XP_006716148 Length = 1183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SLCALVAS 8 S+C LVA+ Sbjct: 16 SICVLVAA 23Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.119 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 565,034 Number of extensions: 402 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |