Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245144 17 3301 NP_001550 17 3301 XP_006710680 17 3301 XP_005270885 17 3301 XP_005270884 17 3301 XP_005270882 17 3301 NP_997205 17 4312 NP_003325 16 5631 NP_695012 16 5631 NP_001229854 16 5631 NP_055673 16 5631 NP_077816 16 5631 NP_055989 16 5631 NP_066015 16 5631 XP_005272707 16 5631 XP_005272706 16 5631 XP_005272705 16 5631 XP_005258381 16 5631 XP_006722580 16 5631 XP_006722579 16 5631 XP_005258380 16 5631 XP_006720682 16 5631 XP_005268318 16 5631 XP_005245743 16 5631 XP_005245742 16 5631 XP_006711757 16 5631 XP_005245741 16 5631 NP_057197 16 7355 NP_001001852 16 7355 NP_055792 16 7355 NP_001158287 16 7355 NP_001158286 16 7355 NP_001158288 16 7355 NP_001158289 16 7355 NP_004506 16 7355 NP_001254738 16 7355 XP_005256735 16 7355 XP_005256734 16 7355 XP_006721606 16 7355 XP_006721605 16 7355 XP_006721604 16 7355 XP_005256733 16 7355 XP_005267475 16 7355 XP_005267473 16 7355 XP_005267472 16 7355 NP_570848 15 9605 NP_570850 15 9605 NP_570849 15 9605 NP_570844 15 9605 NP_570845 15 9605 NP_570846 15 9605 NP_570847 15 9605 NP_056375 15 9605 NP_997465 15 9605>NP_001245144 Length = 776 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAAVRHQW 9 LAA+R QW Sbjct: 568 LAALRPQW 575>NP_001550 Length = 862 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAAVRHQW 9 LAA+R QW Sbjct: 654 LAALRPQW 661>XP_006710680 Length = 776 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAAVRHQW 9 LAA+R QW Sbjct: 568 LAALRPQW 575>XP_005270885 Length = 862 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAAVRHQW 9 LAA+R QW Sbjct: 654 LAALRPQW 661>XP_005270884 Length = 862 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAAVRHQW 9 LAA+R QW Sbjct: 654 LAALRPQW 661>XP_005270882 Length = 862 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAAVRHQW 9 LAA+R QW Sbjct: 654 LAALRPQW 661>NP_997205 Length = 369 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SLAAVRHQW 9 +LAA+R+ W Sbjct: 60 ALAALRNSW 68>NP_003325 Length = 1058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAAVRHQW 9 LAA RHQ+ Sbjct: 940 LAAPRHQY 947>NP_695012 Length = 1058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAAVRHQW 9 LAA RHQ+ Sbjct: 940 LAAPRHQY 947>NP_001229854 Length = 631 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLAAVRHQ 8 SLAA+ HQ Sbjct: 128 SLAAILHQ 135>NP_055673 Length = 709 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLAAVRHQ 8 SLAA+ HQ Sbjct: 206 SLAAILHQ 213>NP_077816 Length = 1499 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SLAAVRHQ 8 SLA RHQ Sbjct: 547 SLAVARHQ 554>NP_055989 Length = 939 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLAAVRH 7 SLAA+RH Sbjct: 768 SLAALRH 774>NP_066015 Length = 2579 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLAAVRH 7 SLA+VRH Sbjct: 2315 SLASVRH 2321>XP_005272707 Length = 1058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAAVRHQW 9 LAA RHQ+ Sbjct: 940 LAAPRHQY 947>XP_005272706 Length = 1064 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAAVRHQW 9 LAA RHQ+ Sbjct: 946 LAAPRHQY 953>XP_005272705 Length = 1109 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAAVRHQW 9 LAA RHQ+ Sbjct: 991 LAAPRHQY 998>XP_005258381 Length = 2224 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLAAVRH 7 SLA+VRH Sbjct: 1960 SLASVRH 1966>XP_006722580 Length = 2532 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLAAVRH 7 SLA+VRH Sbjct: 2268 SLASVRH 2274>XP_006722579 Length = 2544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLAAVRH 7 SLA+VRH Sbjct: 2315 SLASVRH 2321>XP_005258380 Length = 2578 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLAAVRH 7 SLA+VRH Sbjct: 2314 SLASVRH 2320>XP_006720682 Length = 803 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SLAAVRHQ 8 SLA RHQ Sbjct: 547 SLAVARHQ 554>XP_005268318 Length = 1499 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SLAAVRHQ 8 SLA RHQ Sbjct: 547 SLAVARHQ 554>XP_005245743 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLAAVRHQ 8 SLAA+ HQ Sbjct: 206 SLAAILHQ 213>XP_005245742 Length = 631 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLAAVRHQ 8 SLAA+ HQ Sbjct: 128 SLAAILHQ 135>XP_006711757 Length = 631 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLAAVRHQ 8 SLAA+ HQ Sbjct: 128 SLAAILHQ 135>XP_005245741 Length = 631 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLAAVRHQ 8 SLAA+ HQ Sbjct: 128 SLAAILHQ 135>NP_057197 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLAAVRHQW 9 SLAA QW Sbjct: 214 SLAACTKQW 222>NP_001001852 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LAAVRH 7 LAAVRH Sbjct: 155 LAAVRH 160>NP_055792 Length = 1341 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AVRHQW 9 AVR QW Sbjct: 1141 AVREQW 1146>NP_001158287 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AVRHQW 9 AVR QW Sbjct: 1101 AVREQW 1106>NP_001158286 Length = 1328 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AVRHQW 9 AVR QW Sbjct: 1128 AVREQW 1133>NP_001158288 Length = 614 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AVRHQW 9 AVR QW Sbjct: 414 AVREQW 419>NP_001158289 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AVRHQW 9 AVR QW Sbjct: 383 AVREQW 388>NP_004506 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SLAAVRH 7 +LAA+RH Sbjct: 201 ALAAIRH 207>NP_001254738 Length = 352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SLAAVRH 7 +LAA+RH Sbjct: 163 ALAAIRH 169>XP_005256735 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLAAVRHQW 9 SLAA QW Sbjct: 214 SLAACTKQW 222>XP_005256734 Length = 630 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLAAVRHQW 9 SLAA QW Sbjct: 214 SLAACTKQW 222>XP_006721606 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLAAVRHQW 9 SLAA QW Sbjct: 214 SLAACTKQW 222>XP_006721605 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLAAVRHQW 9 SLAA QW Sbjct: 214 SLAACTKQW 222>XP_006721604 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLAAVRHQW 9 SLAA QW Sbjct: 214 SLAACTKQW 222>XP_005256733 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SLAAVRHQW 9 SLAA QW Sbjct: 214 SLAACTKQW 222>XP_005267475 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AVRHQW 9 AVR QW Sbjct: 383 AVREQW 388>XP_005267473 Length = 1329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AVRHQW 9 AVR QW Sbjct: 1129 AVREQW 1134>XP_005267472 Length = 1340 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AVRHQW 9 AVR QW Sbjct: 1140 AVREQW 1145>NP_570848 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAAVRHQ 8 LAA+RH+ Sbjct: 375 LAALRHE 381>NP_570850 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAAVRHQ 8 LAA+RH+ Sbjct: 411 LAALRHE 417>NP_570849 Length = 997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAAVRHQ 8 LAA+RH+ Sbjct: 393 LAALRHE 399>NP_570844 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAAVRHQ 8 LAA+RH+ Sbjct: 320 LAALRHE 326>NP_570845 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAAVRHQ 8 LAA+RH+ Sbjct: 338 LAALRHE 344>NP_570846 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAAVRHQ 8 LAA+RH+ Sbjct: 357 LAALRHE 363>NP_570847 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAAVRHQ 8 LAA+RH+ Sbjct: 374 LAALRHE 380>NP_056375 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAAVRHQ 8 LAA+RH+ Sbjct: 356 LAALRHE 362>NP_997465 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SLAAVRH 7 SLAA RH Sbjct: 13 SLAAYRH 19Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.121 0.452 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 517,753 Number of extensions: 666 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |