Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_078966 18 1935 XP_006723004 18 1935 NP_115272 17 2528 NP_061750 17 2528 XP_006723678 17 4312 XP_005250395 17 4312 NP_003236 17 4312 NP_036284 16 5631 XP_006710605 16 5631 NP_775926 16 7355 NP_001265229 16 7355 NP_001136105 16 7355 NP_005552 16 7355 NP_055123 16 7355 NP_001238784 16 7355 NP_001238780 16 7355 NP_001238781 16 7355 NP_115618 16 7355 NP_001238782 16 7355 XP_005256637 16 7355 XP_005256636 16 7355 XP_006713726 16 7355 NP_112165 15 9605 NP_001096619 15 9605 NP_031371 15 9605 NP_001243783 15 9605 NP_001243823 15 9605 NP_001229260 15 9605 NP_001229259 15 9605 NP_001243788 15 9605 NP_001243789 15 9605 NP_001229256 15 9605 NP_009048 15 9605 NP_001229255 15 9605 NP_001243781 15 9605 NP_001229257 15 9605 NP_001229258 15 9605 NP_001229261 15 9605 NP_001243796 15 9605 NP_001243784 15 9605 NP_001243786 15 9605 NP_001243792 15 9605 NP_001243790 15 9605 XP_005266819 15 9605 XP_006722604 15 9605 XP_006710304 15 9605 NP_958804 15 9605 NP_115268 15 9605 NP_061747 15 9605 NP_060685 15 9605>NP_078966 Length = 14507 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KTLTLNLT 9 KTLTLN T Sbjct: 14075 KTLTLNFT 14082>XP_006723004 Length = 6443 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KTLTLNLT 9 KTLTLN T Sbjct: 6011 KTLTLNFT 6018>NP_115272 Length = 808 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SKTLTLNLT 9 SKT+TL++T Sbjct: 435 SKTITLHIT 443>NP_061750 Length = 929 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SKTLTLNLT 9 SKT+TL++T Sbjct: 435 SKTITLHIT 443>XP_006723678 Length = 718 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SKTLTLNLT 9 +KT+T+N+T Sbjct: 537 TKTVTVNMT 545>XP_005250395 Length = 110 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SKTLTLNLT 9 +KTL+LNL+ Sbjct: 68 AKTLSLNLS 76>NP_003236 Length = 693 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SKTLTLNLT 9 +KT+T+N+T Sbjct: 512 TKTVTVNMT 520>NP_036284 Length = 353 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLT+N Sbjct: 94 SKTLTVN 100>XP_006710605 Length = 353 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLT+N Sbjct: 94 SKTLTVN 100>NP_775926 Length = 334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KTLTLNL 8 +TLTLNL Sbjct: 324 QTLTLNL 330>NP_001265229 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KTLTLNL 8 +TLTLNL Sbjct: 388 QTLTLNL 394>NP_001136105 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KTLTLNLT 9 + LTLNLT Sbjct: 771 EALTLNLT 778>NP_005552 Length = 417 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TLTLNLT 9 TLTLN T Sbjct: 99 TLTLNFT 105>NP_055123 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KTLTLNLT 9 + LTLNLT Sbjct: 771 EALTLNLT 778>NP_001238784 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KTLTLNLT 9 + LTLNLT Sbjct: 385 EALTLNLT 392>NP_001238780 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KTLTLNLT 9 + LTLNLT Sbjct: 385 EALTLNLT 392>NP_001238781 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KTLTLNLT 9 + LTLNLT Sbjct: 385 EALTLNLT 392>NP_115618 Length = 1896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KTLTLN 7 KTLTLN Sbjct: 1501 KTLTLN 1506>NP_001238782 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KTLTLNLT 9 + LTLNLT Sbjct: 385 EALTLNLT 392>XP_005256637 Length = 879 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KTLTLNLT 9 + LTLNLT Sbjct: 770 EALTLNLT 777>XP_005256636 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KTLTLNLT 9 + LTLNLT Sbjct: 771 EALTLNLT 778>XP_006713726 Length = 1910 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KTLTLN 7 KTLTLN Sbjct: 1519 KTLTLN 1524>NP_112165 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TLTLNL 8 TLTLNL Sbjct: 161 TLTLNL 166>NP_001096619 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SKTLTLNL 8 SKT+ +NL Sbjct: 2 SKTMAMNL 9>NP_031371 Length = 1845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLTLNLT 9 T+TLN+T Sbjct: 1584 TVTLNIT 1590>NP_001243783 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243823 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001229260 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001229259 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243788 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243789 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001229256 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_009048 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LTLNLT 9 LTLNLT Sbjct: 12 LTLNLT 17>NP_001229255 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243781 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001229257 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001229258 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001229261 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243796 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243784 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243786 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243792 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_001243790 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>XP_005266819 Length = 1790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLTLNLT 9 T+TLN+T Sbjct: 1529 TVTLNIT 1535>XP_006722604 Length = 1847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLTLNLT 9 T+TLN+T Sbjct: 1586 TVTLNIT 1592>XP_006710304 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 45 SKTLTLH 51>NP_958804 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKTLTLN 7 SKTLTL+ Sbjct: 264 SKTLTLH 270>NP_115268 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SKTLTLNL 8 SKT+TL++ Sbjct: 435 SKTITLHI 442>NP_061747 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SKTLTLNL 8 SKT+TL++ Sbjct: 435 SKTITLHI 442>NP_060685 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SKTLTLNL 8 SKT+ +NL Sbjct: 2 SKTMAMNL 9Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.116 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 324,336 Number of extensions: 423 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |