Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155973 18 1482 NP_001020014 18 1482 NP_055903 18 1482 NP_055330 17 2528 NP_001186231 17 2528 NP_001186232 17 2528 XP_006719496 17 2528 XP_006719495 17 2528 XP_006719494 17 2528 XP_006719493 17 2528 XP_006719492 17 2528 NP_055309 17 3301 NP_005376 17 3301 XP_005255314 17 3301 XP_006721102 17 3301 XP_005255313 17 3301 XP_005255312 17 3301 XP_006721101 17 3301 XP_005255311 17 3301 XP_005255310 17 3301 XP_005265233 17 3301 XP_005265231 17 3301 XP_006713237 17 3301 XP_006713236 17 3301 XP_006713235 17 3301 XP_006713234 17 3301 XP_005265230 17 3301 NP_001073868 16 5631 NP_808880 16 7355 NP_612504 16 7355 NP_065776 16 7355 XP_005250856 16 7355 XP_005250278 16 7355 XP_006715967 16 7355 XP_006715966 16 7355 XP_005250277 16 7355 XP_006715965 16 7355 XP_005250276 16 7355 XP_006715964 16 7355 XP_006715963 16 7355 NP_006260 15 9605 NP_060720 15 9605 NP_001166033 15 9605 NP_849193 15 9605 XP_005273625 15 9605 XP_006716420 15 9605 XP_006716419 15 9605 XP_006713080 15 9605 NP_001138631 15 9605 NP_001123475 15 9605 NP_653243 15 9605>NP_001155973 Length = 1833 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 S SSLNTSL Sbjct: 1529 SNSSLNTSL 1537>NP_001020014 Length = 1029 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 S SSLNTSL Sbjct: 725 SNSSLNTSL 733>NP_055903 Length = 1723 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 S SSLNTSL Sbjct: 1419 SNSSLNTSL 1427>NP_055330 Length = 540 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SKSSLNTS 8 SKS+LNTS Sbjct: 298 SKSNLNTS 305>NP_001186231 Length = 540 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SKSSLNTS 8 SKS+LNTS Sbjct: 298 SKSNLNTS 305>NP_001186232 Length = 540 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SKSSLNTS 8 SKS+LNTS Sbjct: 298 SKSNLNTS 305>XP_006719496 Length = 403 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SKSSLNTS 8 SKS+LNTS Sbjct: 161 SKSNLNTS 168>XP_006719495 Length = 479 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SKSSLNTS 8 SKS+LNTS Sbjct: 237 SKSNLNTS 244>XP_006719494 Length = 531 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SKSSLNTS 8 SKS+LNTS Sbjct: 289 SKSNLNTS 296>XP_006719493 Length = 531 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SKSSLNTS 8 SKS+LNTS Sbjct: 289 SKSNLNTS 296>XP_006719492 Length = 531 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SKSSLNTS 8 SKS+LNTS Sbjct: 289 SKSNLNTS 296>NP_055309 Length = 1962 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 S SSLNT+L Sbjct: 1659 SSSSLNTTL 1667>NP_005376 Length = 1462 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 +KSS NTSL Sbjct: 933 TKSSTNTSL 941>XP_005255314 Length = 1709 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 S SSLNT+L Sbjct: 1406 SSSSLNTTL 1414>XP_006721102 Length = 1820 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 S SSLNT+L Sbjct: 1517 SSSSLNTTL 1525>XP_005255313 Length = 1822 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 S SSLNT+L Sbjct: 1519 SSSSLNTTL 1527>XP_005255312 Length = 1871 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 S SSLNT+L Sbjct: 1568 SSSSLNTTL 1576>XP_006721101 Length = 1907 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 S SSLNT+L Sbjct: 1604 SSSSLNTTL 1612>XP_005255311 Length = 1913 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 S SSLNT+L Sbjct: 1610 SSSSLNTTL 1618>XP_005255310 Length = 1919 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 S SSLNT+L Sbjct: 1616 SSSSLNTTL 1624>XP_005265233 Length = 1163 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 +KSS NTSL Sbjct: 633 TKSSTNTSL 641>XP_005265231 Length = 1210 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 +KSS NTSL Sbjct: 680 TKSSTNTSL 688>XP_006713237 Length = 1353 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 +KSS NTSL Sbjct: 823 TKSSTNTSL 831>XP_006713236 Length = 1353 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 +KSS NTSL Sbjct: 823 TKSSTNTSL 831>XP_006713235 Length = 1353 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 +KSS NTSL Sbjct: 823 TKSSTNTSL 831>XP_006713234 Length = 1436 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 +KSS NTSL Sbjct: 933 TKSSTNTSL 941>XP_005265230 Length = 1463 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 +KSS NTSL Sbjct: 933 TKSSTNTSL 941>NP_001073868 Length = 477 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SKSSLNTSL 9 ++SSLN+SL Sbjct: 174 ARSSLNSSL 182>NP_808880 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 SKSS NTS+ Sbjct: 85 SKSSGNTSV 93>NP_612504 Length = 738 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKSSLNTSL 9 S SSL TSL Sbjct: 534 SSSSLQTSL 542>NP_065776 Length = 861 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKSSLNTSL 9 S SSL TSL Sbjct: 658 SSSSLQTSL 666>XP_005250856 Length = 263 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKSSLNTSL 9 SKSS NTS+ Sbjct: 173 SKSSGNTSV 181>XP_005250278 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKSSLNTSL 9 S SSL TSL Sbjct: 442 SSSSLQTSL 450>XP_006715967 Length = 674 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKSSLNTSL 9 S SSL TSL Sbjct: 459 SSSSLQTSL 467>XP_006715966 Length = 856 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKSSLNTSL 9 S SSL TSL Sbjct: 760 SSSSLQTSL 768>XP_005250277 Length = 862 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKSSLNTSL 9 S SSL TSL Sbjct: 658 SSSSLQTSL 666>XP_006715965 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKSSLNTSL 9 S SSL TSL Sbjct: 760 SSSSLQTSL 768>XP_005250276 Length = 873 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKSSLNTSL 9 S SSL TSL Sbjct: 658 SSSSLQTSL 666>XP_006715964 Length = 964 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKSSLNTSL 9 S SSL TSL Sbjct: 760 SSSSLQTSL 768>XP_006715963 Length = 975 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKSSLNTSL 9 S SSL TSL Sbjct: 760 SSSSLQTSL 768>NP_006260 Length = 2156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SKSSLNTSL 9 SKS+LN+++ Sbjct: 745 SKSNLNSTI 753>NP_060720 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KSSLNT 7 KSSLNT Sbjct: 414 KSSLNT 419>NP_001166033 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KSSLNT 7 KSSLNT Sbjct: 390 KSSLNT 395>NP_849193 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSSLNTS 8 KSSLN+S Sbjct: 12 KSSLNSS 18>XP_005273625 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KSSLNT 7 KSSLNT Sbjct: 414 KSSLNT 419>XP_006716420 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KSSLNT 7 KSSLNT Sbjct: 414 KSSLNT 419>XP_006716419 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KSSLNT 7 KSSLNT Sbjct: 414 KSSLNT 419>XP_006713080 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSSLNTS 8 KSSLN+S Sbjct: 12 KSSLNSS 18>NP_001138631 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KSSLNT 7 KSSLNT Sbjct: 393 KSSLNT 398>NP_001123475 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SSLNTSL 9 SSLNTS+ Sbjct: 194 SSLNTSV 200>NP_653243 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SSLNTSL 9 SSLNTS+ Sbjct: 174 SSLNTSV 180Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.278 0.0940 0.197 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 270,589 Number of extensions: 324 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |