Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 20 509 NP_055869 16 5631 NP_001006948 16 5631 XP_006719360 16 5631 XP_005268797 16 5631 XP_005268796 16 5631 XP_005268795 16 5631 XP_005268794 16 5631 NP_055504 16 7355 NP_001277192 16 7355 NP_872343 16 7355 NP_570971 16 7355 NP_064590 16 7355 NP_001157118 16 7355 XP_006720476 16 7355 XP_006712687 16 7355 XP_006712686 16 7355 XP_006712685 16 7355 XP_006712684 16 7355 XP_006712683 16 7355 XP_006712682 16 7355 XP_006712681 16 7355 XP_005246730 16 7355 XP_005246729 16 7355 XP_006712680 16 7355 XP_006712679 16 7355 XP_005277471 16 7355 XP_006711526 16 7355 XP_006711525 16 7355 XP_006711524 16 7355 NP_001138615 16 7355 NP_000208 15 9605 NP_056359 15 9605 NP_001028676 15 9605 NP_056019 15 9605 NP_001034852 15 9605 XP_006715725 15 9605 XP_006715724 15 9605 XP_006715723 15 9605 XP_006715722 15 9605 XP_005272103 15 9605 XP_006714733 15 9605>NP_002430 Length = 1137 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SKSIYMPLE 9 SKSIY PLE Sbjct: 225 SKSIYTPLE 233>NP_055869 Length = 1464 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSIYMPLE 9 KS+Y+P E Sbjct: 489 KSLYLPQE 496>NP_001006948 Length = 522 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSIYMPLE 9 KS+Y+P E Sbjct: 489 KSLYLPQE 496>XP_006719360 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSIYMPLE 9 KS+Y+P E Sbjct: 36 KSLYLPQE 43>XP_005268797 Length = 1384 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSIYMPLE 9 KS+Y+P E Sbjct: 489 KSLYLPQE 496>XP_005268796 Length = 1403 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSIYMPLE 9 KS+Y+P E Sbjct: 428 KSLYLPQE 435>XP_005268795 Length = 1416 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSIYMPLE 9 KS+Y+P E Sbjct: 441 KSLYLPQE 448>XP_005268794 Length = 1443 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSIYMPLE 9 KS+Y+P E Sbjct: 489 KSLYLPQE 496>NP_055504 Length = 2186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIYMPL 8 S+YMPL Sbjct: 1203 SLYMPL 1208>NP_001277192 Length = 2180 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIYMPL 8 S+YMPL Sbjct: 1197 SLYMPL 1202>NP_872343 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SIYMPLE 9 S Y+PLE Sbjct: 77 SFYLPLE 83>NP_570971 Length = 926 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IYMPLE 9 IY+PLE Sbjct: 343 IYLPLE 348>NP_064590 Length = 843 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IYMPLE 9 IY+PLE Sbjct: 334 IYLPLE 339>NP_001157118 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SIYMPLE 9 S Y+PLE Sbjct: 250 SFYLPLE 256>XP_006720476 Length = 933 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IYMPLE 9 IY+PLE Sbjct: 350 IYLPLE 355>XP_006712687 Length = 2166 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIYMPL 8 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_006712686 Length = 2173 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIYMPL 8 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_006712685 Length = 2175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIYMPL 8 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_006712684 Length = 2189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIYMPL 8 S+YMPL Sbjct: 1197 SLYMPL 1202>XP_006712683 Length = 2195 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIYMPL 8 S+YMPL Sbjct: 1203 SLYMPL 1208>XP_006712682 Length = 2199 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIYMPL 8 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_006712681 Length = 2199 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIYMPL 8 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_005246730 Length = 2199 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIYMPL 8 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_005246729 Length = 2201 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIYMPL 8 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_006712680 Length = 2206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIYMPL 8 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_006712679 Length = 2208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIYMPL 8 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_005277471 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IYMPLE 9 IY+PLE Sbjct: 255 IYLPLE 260>XP_006711526 Length = 843 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IYMPLE 9 IY+PLE Sbjct: 334 IYLPLE 339>XP_006711525 Length = 843 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IYMPLE 9 IY+PLE Sbjct: 334 IYLPLE 339>XP_006711524 Length = 843 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IYMPLE 9 IY+PLE Sbjct: 334 IYLPLE 339>NP_001138615 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SIYMPLE 9 S Y+PLE Sbjct: 202 SFYLPLE 208>NP_000208 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKSIYMPLE 9 SKS YM +E Sbjct: 450 SKSEYMEIE 458>NP_056359 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSIYMPLE 9 KS+Y PL+ Sbjct: 144 KSMYPPLD 151>NP_001028676 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSIYMPLE 9 KS+Y PL+ Sbjct: 144 KSMYPPLD 151>NP_056019 Length = 1657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKSIYMPLE 9 SKS+ PLE Sbjct: 137 SKSLEKPLE 145>NP_001034852 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SKSIYMPLE 9 S+SI+ P+E Sbjct: 236 SESIFRPVE 244>XP_006715725 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKSIYMPLE 9 SKS+ PLE Sbjct: 137 SKSLEKPLE 145>XP_006715724 Length = 1533 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKSIYMPLE 9 SKS+ PLE Sbjct: 137 SKSLEKPLE 145>XP_006715723 Length = 1559 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKSIYMPLE 9 SKS+ PLE Sbjct: 137 SKSLEKPLE 145>XP_006715722 Length = 1614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKSIYMPLE 9 SKS+ PLE Sbjct: 137 SKSLEKPLE 145>XP_005272103 Length = 506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SKSIYMPLE 9 S+SI+ P+E Sbjct: 236 SESIFRPVE 244>XP_006714733 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SKSIYMPLE 9 S+SI+ P+E Sbjct: 236 SESIFRPVE 244Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.127 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 562,790 Number of extensions: 832 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |