Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002040 20 390 NP_115810 17 3301 NP_705895 16 5631 NP_002137 16 5631 XP_005257339 16 5631 XP_005257337 16 5631 XP_006721918 16 5631 XP_005257334 16 5631 XP_006721917 16 5631 XP_005249789 16 5631 XP_005249788 16 5631 XP_006715778 16 5631 XP_005249787 16 5631 NP_109377 16 5631 NP_004501 16 7355 NP_004500 16 7355 NP_001103691 16 7355 NP_001103690 16 7355 NP_536349 16 7355 NP_006774 16 7355 NP_001103689 16 7355 NP_001171944 16 7355 NP_001273282 16 7355 NP_001273281 16 7355 NP_064575 16 7355 XP_006722922 16 7355 XP_005246584 16 7355 XP_006712552 16 7355 XP_006712550 16 7355 XP_006712549 16 7355 XP_005246582 16 7355 XP_006710841 16 7355 XP_005276104 16 7355 NP_060316 15 9605 NP_055951 15 9605 NP_001229263 15 9605 NP_055183 15 9605 NP_954629 15 9605 NP_001229262 15 9605 NP_001229264 15 9605 NP_001001933 15 9605 NP_689602 15 9605 NP_001269736 15 9605 NP_001269735 15 9605 NP_001269734 15 9605 NP_062547 15 9605 NP_001243043 15 9605 NP_073737 15 9605 XP_006718823 15 9605 XP_005251972 15 9605 XP_005265032 15 9605 XP_005265031 15 9605 XP_005265030 15 9605 XP_005246831 15 9605 XP_005246830 15 9605>NP_002040 Length = 413 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SKRARTQCT 9 SKRA TQCT Sbjct: 251 SKRAGTQCT 259>NP_115810 Length = 567 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SKRARTQCT 9 +K +RTQC+ Sbjct: 28 AKNSRTQCS 36>NP_705895 Length = 443 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 SKRART T Sbjct: 191 SKRARTAYT 199>NP_002137 Length = 431 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 SKRART T Sbjct: 188 SKRARTAYT 196>XP_005257339 Length = 299 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 SKRART T Sbjct: 56 SKRARTAYT 64>XP_005257337 Length = 358 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 SKRART T Sbjct: 115 SKRARTAYT 123>XP_006721918 Length = 431 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 SKRART T Sbjct: 188 SKRARTAYT 196>XP_005257334 Length = 431 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 SKRART T Sbjct: 188 SKRARTAYT 196>XP_006721917 Length = 431 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 SKRART T Sbjct: 188 SKRARTAYT 196>XP_005249789 Length = 443 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 SKRART T Sbjct: 191 SKRARTAYT 199>XP_005249788 Length = 443 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 SKRART T Sbjct: 191 SKRARTAYT 199>XP_006715778 Length = 443 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 SKRART T Sbjct: 191 SKRARTAYT 199>XP_005249787 Length = 443 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 SKRART T Sbjct: 191 SKRARTAYT 199>NP_109377 Length = 443 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 SKRART T Sbjct: 191 SKRARTAYT 199>NP_004501 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SKRARTQC 8 +++ART+C Sbjct: 335 AQKARTEC 342>NP_004500 Length = 689 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SKRARTQC 8 +++ART+C Sbjct: 335 AQKARTEC 342>NP_001103691 Length = 261 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKRARTQ 7 SKRA+TQ Sbjct: 222 SKRAQTQ 228>NP_001103690 Length = 261 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKRARTQ 7 SKRA+TQ Sbjct: 222 SKRAQTQ 228>NP_536349 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SKRARTQC 8 +++ART+C Sbjct: 335 AQKARTEC 342>NP_006774 Length = 261 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKRARTQ 7 SKRA+TQ Sbjct: 222 SKRAQTQ 228>NP_001103689 Length = 261 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKRARTQ 7 SKRA+TQ Sbjct: 222 SKRAQTQ 228>NP_001171944 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SKRARTQC 8 +++ART+C Sbjct: 341 AQKARTEC 348>NP_001273282 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 + RAR QC+ Sbjct: 279 ASRARIQCS 287>NP_001273281 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 + RAR QC+ Sbjct: 320 ASRARIQCS 328>NP_064575 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 + RAR QC+ Sbjct: 340 ASRARIQCS 348>XP_006722922 Length = 658 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RARTQC 8 RART+C Sbjct: 474 RARTRC 479>XP_005246584 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SKRARTQC 8 +++ART+C Sbjct: 132 AQKARTEC 139>XP_006712552 Length = 648 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SKRARTQC 8 +++ART+C Sbjct: 341 AQKARTEC 348>XP_006712550 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SKRARTQC 8 +++ART+C Sbjct: 341 AQKARTEC 348>XP_006712549 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SKRARTQC 8 +++ART+C Sbjct: 335 AQKARTEC 342>XP_005246582 Length = 719 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SKRARTQC 8 +++ART+C Sbjct: 341 AQKARTEC 348>XP_006710841 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 + RAR QC+ Sbjct: 279 ASRARIQCS 287>XP_005276104 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SKRARTQC 8 ++RAR QC Sbjct: 171 NRRARHQC 178>NP_060316 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KRARTQC 8 KRA T+C Sbjct: 151 KRALTEC 157>NP_055951 Length = 2570 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SKRARTQCT 9 S RAR CT Sbjct: 2129 SCRARNPCT 2137>NP_001229263 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 +KRART T Sbjct: 219 AKRARTSFT 227>NP_055183 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 +KRART T Sbjct: 248 AKRARTSFT 256>NP_954629 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 +KRART T Sbjct: 248 AKRARTSFT 256>NP_001229262 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 +KRART T Sbjct: 237 AKRARTSFT 245>NP_001229264 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 +KRART T Sbjct: 32 AKRARTSFT 40>NP_001001933 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 +KRART T Sbjct: 225 AKRARTSFT 233>NP_689602 Length = 164 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KRARTQC 8 K +RTQC Sbjct: 120 KGSRTQC 126>NP_001269736 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SKRARTQCT 9 SKR + CT Sbjct: 51 SKRPKLSCT 59>NP_001269735 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SKRARTQCT 9 SKR + CT Sbjct: 89 SKRPKLSCT 97>NP_001269734 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SKRARTQCT 9 SKR + CT Sbjct: 89 SKRPKLSCT 97>NP_062547 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 ARTQC 8 ARTQC Sbjct: 289 ARTQC 293>NP_001243043 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 +KRART T Sbjct: 215 AKRARTSFT 223>NP_073737 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SKRARTQCT 9 SKR + CT Sbjct: 89 SKRPKLSCT 97>XP_006718823 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 RARTQC 8 RART C Sbjct: 154 RARTHC 159>XP_005251972 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKRARTQCT 9 +KRART T Sbjct: 224 AKRARTSFT 232>XP_005265032 Length = 2545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SKRARTQCT 9 S RAR CT Sbjct: 2079 SCRARNPCT 2087>XP_005265031 Length = 2569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SKRARTQCT 9 S RAR CT Sbjct: 2129 SCRARNPCT 2137>XP_005265030 Length = 2595 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SKRARTQCT 9 S RAR CT Sbjct: 2129 SCRARNPCT 2137>XP_005246831 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SKRARTQCT 9 SKR + CT Sbjct: 89 SKRPKLSCT 97>XP_005246830 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SKRARTQCT 9 SKR + CT Sbjct: 89 SKRPKLSCT 97Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.112 0.334 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 459,977 Number of extensions: 720 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |