Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_004159 17 3301 NP_705618 17 3301 NP_004289 17 3301 NP_001265241 17 3301 XP_005248386 17 3301 NP_060132 16 5631 NP_001164009 16 5631 NP_001170781 16 5631 NP_001129737 16 5631 NP_001012999 16 5631 NP_775814 16 5631 XP_005247256 16 5631 XP_006713590 16 5631 XP_006713589 16 5631 XP_005247255 16 5631 NP_001170782 16 5631 NP_060385 16 7355 NP_001131074 16 7355 NP_057039 16 7355 XP_003960381 16 7355 XP_006719533 16 7355 XP_006713898 16 7355 XP_003403469 16 7355 XP_006713897 16 7355 XP_005264409 16 7355 XP_005264408 16 7355 XP_006710216 16 7355 XP_003403820 16 7355 XP_006710215 16 7355 NP_001018048 15 9605 NP_056001 15 9605 NP_001018047 15 9605 NP_150648 15 9605 NP_001032249 15 9605 NP_002411 15 9605 NP_001238953 15 9605 NP_001238949 15 9605 NP_001269657 15 9605 NP_689495 15 9605 NP_001364 15 9605 NP_005081 15 9605 NP_065907 15 9605 NP_001185517 15 9605 XP_005247960 15 9605 XP_006711798 15 9605 NP_001108105 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SKLYGELAL 9 SK YGELAL Sbjct: 154 SKFYGELAL 162>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SKLYGELAL 9 SK YGELAL Sbjct: 154 SKFYGELAL 162>NP_004159 Length = 664 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 SKLYG+L Sbjct: 540 SKLYGDL 546>NP_705618 Length = 1391 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLYGELA 8 +KLYGE A Sbjct: 1186 TKLYGEFA 1193>NP_004289 Length = 1332 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLYGELA 8 +KLYGE A Sbjct: 1127 TKLYGEFA 1134>NP_001265241 Length = 1327 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLYGELA 8 +KLYGE A Sbjct: 1122 TKLYGEFA 1129>XP_005248386 Length = 668 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 SKLYG+L Sbjct: 540 SKLYGDL 546>NP_060132 Length = 2022 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKLYGELAL 9 SK +G+LAL Sbjct: 669 SKQFGQLAL 677>NP_001164009 Length = 539 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 +KLYGE+ Sbjct: 261 TKLYGEI 267>NP_001170781 Length = 2017 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKLYGELAL 9 SK +G+LAL Sbjct: 664 SKQFGQLAL 672>NP_001129737 Length = 517 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKLYGELAL 9 S L+GE+AL Sbjct: 4 SLLFGEMAL 12>NP_001012999 Length = 967 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLYGELA 8 SKLYG +A Sbjct: 528 SKLYGAVA 535>NP_775814 Length = 767 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 +KLYGE+ Sbjct: 261 TKLYGEI 267>XP_005247256 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 +KLYGE+ Sbjct: 44 TKLYGEI 50>XP_006713590 Length = 778 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 +KLYGE+ Sbjct: 261 TKLYGEI 267>XP_006713589 Length = 778 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 +KLYGE+ Sbjct: 261 TKLYGEI 267>XP_005247255 Length = 795 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 +KLYGE+ Sbjct: 289 TKLYGEI 295>NP_001170782 Length = 2017 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKLYGELAL 9 SK +G+LAL Sbjct: 664 SKQFGQLAL 672>NP_060385 Length = 579 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SKLYGELA 8 ++LYG+LA Sbjct: 545 NRLYGKLA 552>NP_001131074 Length = 274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KLYGEL 7 K+YGEL Sbjct: 85 KIYGEL 90>NP_057039 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KLYGEL 7 K+YGEL Sbjct: 108 KIYGEL 113>XP_003960381 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 S+LYG+L Sbjct: 356 SRLYGDL 362>XP_006719533 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SKLYGELA 8 ++LYG+LA Sbjct: 488 NRLYGKLA 495>XP_006713898 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 S+LYG+L Sbjct: 356 SRLYGDL 362>XP_003403469 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 S+LYG+L Sbjct: 356 SRLYGDL 362>XP_006713897 Length = 729 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 S+LYG+L Sbjct: 356 SRLYGDL 362>XP_005264409 Length = 170 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KLYGEL 7 K+YGEL Sbjct: 108 KIYGEL 113>XP_005264408 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KLYGEL 7 K+YGEL Sbjct: 108 KIYGEL 113>XP_006710216 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 S+LYG+L Sbjct: 356 SRLYGDL 362>XP_003403820 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 S+LYG+L Sbjct: 356 SRLYGDL 362>XP_006710215 Length = 729 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 S+LYG+L Sbjct: 356 SRLYGDL 362>NP_001018048 Length = 3069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLYGELAL 9 K+YG+L L Sbjct: 765 KIYGKLPL 772>NP_056001 Length = 3095 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLYGELAL 9 K+YG+L L Sbjct: 765 KIYGKLPL 772>NP_001018047 Length = 3135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLYGELAL 9 K+YG+L L Sbjct: 765 KIYGKLPL 772>NP_150648 Length = 3174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLYGELAL 9 K+YG+L L Sbjct: 765 KIYGKLPL 772>NP_001032249 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KLYGELA 8 K YGE+A Sbjct: 273 KTYGEMA 279>NP_002411 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKLYGELAL 9 SK +G+LAL Sbjct: 673 SKDFGQLAL 681>NP_001238953 Length = 1625 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKLYGELAL 9 SK +G+LAL Sbjct: 695 SKDFGQLAL 703>NP_001238949 Length = 1642 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKLYGELAL 9 SK +G+LAL Sbjct: 712 SKDFGQLAL 720>NP_001269657 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KLYGELA 8 K YGE+A Sbjct: 235 KTYGEMA 241>NP_689495 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KLYGELA 8 K YGE+A Sbjct: 273 KTYGEMA 279>NP_001364 Length = 4515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 S+LYG+L Sbjct: 1889 SELYGQL 1895>NP_005081 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SKLYGELA 8 + LYG+LA Sbjct: 541 TSLYGQLA 548>NP_065907 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SKLYGEL 7 SKLYG + Sbjct: 201 SKLYGSI 207>NP_001185517 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SKLYGELA 8 + LYG+LA Sbjct: 541 TSLYGQLA 548>XP_005247960 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KLYGELA 8 K YGE+A Sbjct: 256 KTYGEMA 262>XP_006711798 Length = 4586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKLYGEL 7 S+LYG+L Sbjct: 1911 SELYGQL 1917>NP_001108105 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SKLYGELA 8 + LYG+LA Sbjct: 310 TSLYGQLA 317Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.137 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 451,820 Number of extensions: 571 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |